LOCUS       NM_001033539             983 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus brain expressed family member 6 (Bex6), mRNA.
ACCESSION   NM_001033539 XM_622648 XM_914646
VERSION     NM_001033539.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 983)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 983)
  AUTHORS   Koscielny,G., Yaikhom,G., Iyer,V., Meehan,T.F., Morgan,H.,
            Atienza-Herrero,J., Blake,A., Chen,C.K., Easty,R., Di Fenza,A.,
            Fiegel,T., Grifiths,M., Horne,A., Karp,N.A., Kurbatova,N.,
            Mason,J.C., Matthews,P., Oakley,D.J., Qazi,A., Regnart,J.,
            Retha,A., Santos,L.A., Sneddon,D.J., Warren,J., Westerberg,H.,
            Wilson,R.J., Melvin,D.G., Smedley,D., Brown,S.D., Flicek,P.,
            Skarnes,W.C., Mallon,A.M. and Parkinson,H.
  TITLE     The International Mouse Phenotyping Consortium Web Portal, a
            unified point of access for knockout mice and related phenotyping
            data
  JOURNAL   Nucleic Acids Res 42 (Database issue), D802-D809 (2014)
   PUBMED   24194600
REFERENCE   3  (bases 1 to 983)
  AUTHORS   Alvarez,E., Zhou,W., Witta,S.E. and Freed,C.R.
  TITLE     Characterization of the Bex gene family in humans, mice, and rats
  JOURNAL   Gene 357 (1), 18-28 (2005)
   PUBMED   15958283
REFERENCE   4  (bases 1 to 983)
  AUTHORS   Koo,J.H., Saraswati,M. and Margolis,F.L.
  TITLE     Immunolocalization of Bex protein in the mouse brain and olfactory
            system
  JOURNAL   J Comp Neurol 487 (1), 1-14 (2005)
   PUBMED   15861462
REFERENCE   5  (bases 1 to 983)
  AUTHORS   Sharov,A.A., Piao,Y., Matoba,R., Dudekula,D.B., Qian,Y.,
            VanBuren,V., Falco,G., Martin,P.R., Stagg,C.A., Bassey,U.C.,
            Wang,Y., Carter,M.G., Hamatani,T., Aiba,K., Akutsu,H., Sharova,L.,
            Tanaka,T.S., Kimber,W.L., Yoshikawa,T., Jaradat,S.A., Pantano,S.,
            Nagaraja,R., Boheler,K.R., Taub,D., Hodes,R.J., Longo,D.L.,
            Schlessinger,D., Keller,J., Klotz,E., Kelsoe,G., Umezawa,A.,
            Vescovi,A.L., Rossant,J., Kunath,T., Hogan,B.L., Curci,A.,
            D'Urso,M., Kelso,J., Hide,W. and Ko,M.S.
  TITLE     Transcriptome analysis of mouse stem cells and early embryos
  JOURNAL   PLoS Biol 1 (3), E74 (2003)
   PUBMED   14691545
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AY833559.1.
            
            On Sep 7, 2006 this sequence version replaced NM_001033539.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY833559.1, AK157452.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849383
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..983
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="16"
                     /map="16 22.4 cM"
     gene            1..983
                     /gene="Bex6"
                     /gene_synonym="B020003O03Rik"
                     /note="brain expressed family member 6"
                     /db_xref="GeneID:328660"
                     /db_xref="MGI:MGI:3588247"
     exon            1..102
                     /gene="Bex6"
                     /gene_synonym="B020003O03Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            103..224
                     /gene="Bex6"
                     /gene_synonym="B020003O03Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            225..983
                     /gene="Bex6"
                     /gene_synonym="B020003O03Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             415..759
                     /gene="Bex6"
                     /gene_synonym="B020003O03Rik"
                     /note="brain expressed, X-linked 6; brain-expressed
                     X-linked protein 6 homolog; brain expressed gene 6"
                     /codon_start=1
                     /product="protein BEX6"
                     /protein_id="NP_001028711.1"
                     /db_xref="CCDS:CCDS28116.1"
                     /db_xref="GeneID:328660"
                     /db_xref="MGI:MGI:3588247"
                     /translation="MMSKVKQVIQDLTVEKDKGGEASRHSEEESHLLEEVETKNPGGY
                     VKRKVRRLVCNFRWPTPNRHVDHSEGREDAGRFVGQETEAKRKSQEQWMRFSKWFLTP
                     ESDSHYNLGLIP"
     regulatory      782..787
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Bex6"
                     /gene_synonym="B020003O03Rik"
                     /note="hexamer: CATAAA"
     polyA_site      805
                     /gene="Bex6"
                     /gene_synonym="B020003O03Rik"
                     /note="major polyA site"
ORIGIN      
        1 atctaaatcc acacacttac cccagagaca cttgtcggtt catgcttact gatgccatac
       61 cgacaatagc caagatatgc agtcagcttg gaggttcaac agctcgtctg ttggaatcta
      121 cagaagacca gctgagacaa ctagcctcgt gggatgagta actaccagat tcttcgactt
      181 cacatccaca gctgcccatt gttgggttag ctggactaca aattggcact gtctccagtc
      241 cgctgtccct tcctaacaga ggcacctgtt cctggtggca cagttcctgg tggcattcag
      301 agtgccaggg aaagcaacag gaggaggaag agtggagcag gtctgagaag cagaagcgca
      361 tctggtggtg accatcgcta ggaagagaag gaggcaagga tcggtccagg agaaatgatg
      421 tccaaagtca aacaagtcat acaagatctc actgtggaga aagacaaagg tggggaggcc
      481 tccagacaca gtgaagaaga atcccacctt ctggaagagg tagagaccaa gaatcctgga
      541 ggttatgtca aaaggaaagt caggcgactt gtgtgtaact ttagatggcc cacacccaac
      601 agacatgttg atcacagtga agggagagag gatgctggga gatttgtagg gcaggagaca
      661 gaagccaaga gaaagagtca ggagcagtgg atgaggtttt ccaagtggtt cctcacaccg
      721 gaatctgaca gtcattacaa cttaggcctc attccttgaa atctaagatt ttctctgggc
      781 tcataaagtg actactgttt tacaagcttg tatttagtgg gctatttttt ctaaactttc
      841 catgtttcca cttaacggtt tctacgtaaa tattgtttac ttgttgcatt tagttctaaa
      901 cattcctacc agcatggaaa tttaacccat tttagaaaaa aaaaccctcc tttttcataa
      961 tttgaaatta ataaagcagt tta
//
