LOCUS       XM_006510703            5214 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus B cell CLL/lymphoma 9-like (Bcl9l),
            transcript variant X4, mRNA.
ACCESSION   XM_006510703
VERSION     XM_006510703.4
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000075.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Aug 8, 2019 this sequence version replaced XM_006510703.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5214
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="9"
     gene            1..5214
                     /gene="Bcl9l"
                     /gene_synonym="B9L; BCL9-2; DLNB11"
                     /note="B cell CLL/lymphoma 9-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     mRNAs, 19 ESTs, 1262 long SRA reads, 8 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 37 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:80288"
                     /db_xref="MGI:MGI:1933114"
     CDS             166..4650
                     /gene="Bcl9l"
                     /gene_synonym="B9L; BCL9-2; DLNB11"
                     /codon_start=1
                     /product="B-cell CLL/lymphoma 9-like protein isoform X1"
                     /protein_id="XP_006510766.1"
                     /db_xref="GeneID:80288"
                     /db_xref="MGI:MGI:1933114"
                     /translation="MRILANKTRLPHPRRREAPGSPPLSPRGHCPPAPAKPMHPENKL
                     TNHGKTGNGGAQSQHQNVNQGPTCNLGSKGVGAGSHGAKANQISPSNSSLKNPQAGVS
                     PFSSLKGKVKRERSVSVDSGEQREAGTPSLDSEAKEVAPRSKRRCVLERKQPYSGDEW
                     CSGPDSEEDDKPIAAAHNCNVADPAMVTPQLGPGQTAQLPLSESSAPGPQHGPQPGLR
                     PDVPGGGGGGVPGKPPSQFVYVFTTHLANTAAEAVLQGRAESILAYHQQNVPRAKLDQ
                     APKVPPTPEPLPLNTPSAGTPQSQPPPLPPPPPAPGSAPPALPPEGPPEDTSQDLAPN
                     SVGAASTGGGTGGTHPNTPTAATANNPLPPGGDPGSAPGSALLGEATPTGNGQRNLVG
                     SEGLSKEQLEHRERSLQTLRDIERLLLRSGETEPFLKGPPGGAGEGGPPAQAPSAAQP
                     PPSAPPGGLKKYEEPLQSMISQTQSLGGPPLEHEVPGHPQGGDMGQQMNMMMQRLGQD
                     SLTPEQVAWRKLQEEYYEEKRRKEEQIGLHGGRPLQDMVGMGGMMGRGPPPPYHSKPG
                     DQWPPGMGAQLRGPMDVQDPMQLRPGPPFPGPRFPGNQMQRVPGFGGMQSMPMEVPMN
                     AMQRPVRPGMAWNEDLPPIGGPSNFAQNAVPYPGGQGEAERFMTPRVREELLRHQLLE
                     KRSMGMQRPLGMAGSGMGQSMEMERMIQAHRQMDPAMFPGQMTGGDGLAGTPMGIEFG
                     GGRGLLSPPMGQSGLREVDPPMGPGNLNMNMNVNMNMNMNLNVQMTPQQQMLMSQKMR
                     GPGDMMGPQGLSPEEMARVRAQNSSGMMGGPQKMLMPSQFPNQGQQGFSGGQGPYQAM
                     PQDMGNTPDMFSPDQSSVPMGTVGTARLSHMPLPPASNPPGSVHLASNRGLGRRPSDL
                     TISINQMGSPGMGHLKSPTLSQVHSPLVTSPSANLKSPQTPSQMVPLPSANPPGPLKS
                     PQVLSSSLGVRSPTGSPSRLKSPSMAVPSPGWVASPKTAMPSPGVSQNKQPPLSINSS
                     STLGNVEQGALPPSAPRNSSSAPPANPSSGLMNPSLPFTSSPDPTPSQNPLSLMMSQM
                     SKYAMPSSTPLYHNAIKTIATSDDELLPDRPLLPPPPPPQGSGPGISNNQPNQMHMNP
                     AAAQSPMGMNLPGQQPLSHEPPPTMLPSPTPLGSNIPLHPNAQGTGGSSQNSMMMAPG
                     GPDSLNAPCGPVPSSSQMMSFPPRLQQPHGAMAPTGAGGPGLQQHYPSGMALPPEDLP
                     TQPPGPIPPQQHLMGKGMTGRMGDAYPPGVLPGVASVLNDPELSEVIRPTPTGIPEFD
                     LSRIIPSEKPSSTLQYFPKSENQPPKAQPPNLHLMNLQNMMAEQTPSRPPNLPGQQGV
                     QRGLSMSMCHPGQMSLLGRTGVPPQQGMVPHGLHQGVMSPPQGLMTQQNFMLMKQRGV
                     GGEVYTQPPHMLSPQGSLMGPPPQQNLMVSHPLRQRSVSLDSQMGYLPTPGSMANLPF
                     "
ORIGIN      
        1 ctgctggagg atcccagtcc acccaaggac cctgacctgg ttatggcgtc cagctccggc
       61 ctggcgtgag gacccccgag cggtgcgagt ccctgctcca gtaccgagta cctggctggg
      121 ccctgggcac gcacaggggt cgtagcccca ctgtgtgtgg gagccatgag gatcctggct
      181 aacaagacaa ggttacccca ccccaggagg agagaggctc cagggagtcc accgctgtcc
      241 cctcggggcc actgcccccc tgccccagcc aagccaatgc acccagaaaa taaactgacc
      301 aatcatggca agacagggaa tggaggggcc caatcccagc accagaatgt gaaccaagga
      361 cccacctgca acctgggctc caagggcgtg ggggcgggga gccatggggc caaggccaac
      421 cagatctcac ctagcaactc aagtctgaag aacccccagg caggagtgtc tcctttcagc
      481 tcactcaagg gcaaggtgaa gcgcgagagg agtgtgtctg tggactctgg agagcagcgg
      541 gaagctggga ctccatccct cgattcagag gccaaagagg tggcaccccg gagtaaacgg
      601 aggtgtgtgc tggagcggaa gcagccgtac agtggggacg aatggtgctc tgggccagac
      661 agcgaggagg acgacaagcc cattgcggcc gcccacaatt gtaatgtagc agacccagcc
      721 atggtgaccc cacagttggg tcctggccaa actgcccaac tgcccctcag tgagagcagt
      781 gcaccaggcc cccaacatgg cccccagcca ggccttcggc cagacgttcc tgggggtggg
      841 ggtgggggcg tcccaggaaa gcctccgtca cagttcgtct atgtcttcac cacccatctg
      901 gccaacacag cggcagaggc agtgctgcag ggccgggcag agtccatcct tgcctaccac
      961 cagcagaatg tgcctcgggc caagctggat caggccccta aagtgccacc caccccagaa
     1021 ccactacccc tgaatacgcc atcagcaggt acaccacagt cccagccacc tcctttgcca
     1081 ccgccacccc cagcccctgg cagtgcccct cctgctctgc ccccggaggg gcctcctgaa
     1141 gacaccagtc aggacctggc ccccaactca gtgggagctg ccagtacagg tggtgggact
     1201 gggggtaccc accctaacac cccaacggct gccaccgcta acaaccctct gcctcctgga
     1261 ggagaccctg gcagtgcccc tggctccgcc ctattggggg aggccacgcc caccggaaat
     1321 gggcagagga acctggtggg ctctgagggc ctgtccaaag agcagctgga gcaccgggag
     1381 cgctccctcc agacactgcg ggacatcgag aggctgctgc tccgcagtgg ggagactgag
     1441 cccttcctca aggggccccc gggaggagct ggtgagggag gcccaccggc acaagcgccc
     1501 tctgctgctc aaccgcctcc ctccgcccct cctggggggc tgaagaagta tgaggagcct
     1561 ctgcagtcaa tgatctcaca gacacagagc ctaggaggtc cccctctgga gcatgaagtg
     1621 ccggggcacc ctcagggtgg agacatggga cagcaaatga acatgatgat gcagaggctg
     1681 ggccaggaca gtctgacgcc cgagcaggtg gcctggcgca aactgcagga agagtactac
     1741 gaggagaagc ggcggaaaga ggagcagatt ggattgcacg gaggccgccc tctgcaggac
     1801 atggtgggaa tggggggtat gatggggagg gggcccccac ctccttacca cagcaaacct
     1861 ggggatcagt ggccacctgg aatgggtgca caactccgag ggcctatgga tgtccaagat
     1921 cccatgcagc tccgacctgg acctcccttc cctggccccc gtttcccagg caaccagatg
     1981 caaagggtgc ccggatttgg aggtatgcag agtatgccca tggaagtacc catgaatgcc
     2041 atgcagagac ctgtaaggcc aggcatggcc tggaatgaag acttgccccc tattggggga
     2101 cccagcaact ttgcccagaa tgccgtgccc tacccaggtg ggcaggggga ggcagagcga
     2161 ttcatgaccc ctcgtgtccg ggaggagctg ctgaggcacc agttgctgga gaagcggtcc
     2221 atgggcatgc agcgtcccct gggcatggca ggtagcggca tgggacagag catggaaatg
     2281 gaacggatga tacaggctca tcgacagatg gaccctgcca tgttcccggg acagatgact
     2341 ggaggagatg gtctcgccgg cacacccatg ggcatagagt ttggtggagg tcggggcctc
     2401 ctgagccctc caatgggaca gtctgggctg cgggaggtag acccgcctat ggggccaggc
     2461 aacctcaaca tgaacatgaa tgtgaacatg aacatgaaca tgaacctgaa tgtgcagatg
     2521 acgccccagc agcagatgct gatgtcacag aagatgcggg gccctggaga catgatgggt
     2581 cctcagggcc tcagtcccga agagatggct cgggttcggg cccagaacag tagtggcatg
     2641 atggggggtc cgcagaagat gctcatgcct tcacagtttc ccaaccaggg ccagcaggga
     2701 ttctctgggg gccagggacc ttaccaagcc atgccccagg acatgggcaa cactccagac
     2761 atgttcagcc ctgatcagag ttcagtgccc atgggcactg tgggcactgc ccggctcagc
     2821 catatgcctc tgccccctgc ctccaatcct cctgggtctg tgcacttggc ctccaacagg
     2881 gggctaggca ggcggccttc agatctcacc atcagtatta atcagatggg ctcaccgggc
     2941 atgggacatc tgaagtcacc cacccttagc caggtgcact cccccctggt cacctcaccc
     3001 tctgccaacc tcaagtcacc ccagactccc tcccagatgg tacccttgcc ttctgccaac
     3061 ccaccgggac ctctcaagtc accccaggtc ctcagctctt ccctcggtgt gcgttcaccc
     3121 actggctcac ccagcaggct caagtctccc tccatggcgg tgccttctcc aggctgggtc
     3181 gcctctccca agacagccat gcctagtcct ggggtctccc agaacaagca gccacctctc
     3241 agcataaact cttcctccac cctgggcaac gtggaacagg gtgctcttcc acctagcgca
     3301 ccccggaaca gctcctccgc tcctcccgcc aacccttcca gtggcctcat gaaccccagc
     3361 ctaccgttca catcctcccc agaccccacc ccttcccaga accctctgtc actgatgatg
     3421 tctcagatgt ccaagtacgc catgcccagc tcgaccccgc tataccacaa cgccatcaag
     3481 accatcgcca cctcagatga cgagctgctg cctgaccggc ccctgctacc cccaccccca
     3541 ccaccgcagg gctctgggcc aggtatcagc aataaccagc ccaaccagat gcacatgaac
     3601 cctgctgctg cccagagccc catgggcatg aacttgccag gccagcagcc cctgtcccat
     3661 gagcctcccc ctactatgtt gccctccccc acccctctgg ggtccaacat tccactgcat
     3721 cccaatgcac aggggactgg gggctcttct caaaactcaa tgatgatggc cccaggaggc
     3781 ccagactccc taaatgcccc ttgtggccct gtgcccagct cctcccagat gatgtccttc
     3841 cctcctcggc tgcagcaacc tcacggtgcc atggccccca ccggggccgg gggcccaggc
     3901 ctgcagcagc actacccttc aggcatggcc ctgccccccg aggacctgcc cacccagcca
     3961 ccgggtccca taccccccca gcagcaccta atgggcaaag gcatgactgg ccgcatgggc
     4021 gacgcatacc cacccggggt gctccctggg gtggcatcgg tactgaatga cccagagctg
     4081 agtgaggtga tccggcccac ccctaccggc attcctgagt tcgacttatc caggatcatc
     4141 ccctctgaga aaccaagcag caccctccag tacttcccca agagcgagaa ccagcccccc
     4201 aaggcccagc cccccaatct gcatctcatg aacctgcaga acatgatggc agagcagacc
     4261 ccgtctcgac cccccaacct cccgggccaa cagggggtcc agcgggggct cagcatgtcc
     4321 atgtgccacc ctggacagat gtccttgctg ggcaggacag gtgtgccccc acaacagggc
     4381 atggtgcccc atggcctgca ccagggggtc atgtcccctc cacaaggcct catgacccag
     4441 cagaatttta tgctgatgaa gcagaggggt gtggggggcg aggtctacac ccagcctccc
     4501 cacatgctct ccccacaggg ctccctcatg ggccccccac cccagcagaa cctcatggtg
     4561 tcccaccctc tgcgtcagcg cagtgtgtct ctggacagcc agatgggcta cctgccaacg
     4621 ccgggcagca tggccaatct acccttctag caggcccctc ggtctggggc tggggaaact
     4681 gaaaatatgt taactttaaa aagttttgtt tttcctccag tgttgggatg gatggcctgg
     4741 gtccaggggt agggtggcgg gtgggaacgg gcttgtgtgg ggagtggtgt ttgtggaaac
     4801 ctgctgtgct ggcagctgag ggggaagcgg caagtgtcgg gtgaggagtt ggaatcgggc
     4861 tctgctccat ttctgtcact aggactgcgc ctcctctgcc ccccccccct ttcccgtgga
     4921 gcttctgtct ccctttgtct ttgcacttcc ccgctttcag ctatgttttg ggggtccttg
     4981 gggagagagg agggtcttcc atcctctgac ccgtcgtgga ctgtcacctt gccggcggcg
     5041 cttcaggtcc gtttctcgcc ttcccgtctc tctgctttta ccctgttttc cttctgcctc
     5101 atttcctttc cctactgacg tggctgacct cctctcccac gccccctgca ggcagctggc
     5161 caggtgggca ggtgccagcg gagctgtaaa tagagctggg cttttgtgcc ggtt
//
