LOCUS       NM_009746                981 bp    mRNA    linear   ROD 07-FEB-2025
DEFINITION  Mus musculus B cell CLL/lymphoma 7C (Bcl7c), transcript variant 2,
            mRNA.
ACCESSION   NM_009746
VERSION     NM_009746.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 981)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 981)
  AUTHORS   Wischhof,L., Lee,H.M., Tutas,J., Overkott,C., Tedt,E., Stork,M.,
            Peitz,M., Brustle,O., Ulas,T., Handler,K., Schultze,J.L.,
            Ehninger,D., Nicotera,P., Salomoni,P. and Bano,D.
  TITLE     BCL7A-containing SWI/SNF/BAF complexes modulate mitochondrial
            bioenergetics during neural progenitor differentiation
  JOURNAL   EMBO J 41 (23), e110595 (2022)
   PUBMED   36305367
  REMARK    Erratum:[EMBO J. 2024 Oct;43(19):4437-4438. doi:
            10.1038/s44318-024-00157-7.. PMID: 39223333]
REFERENCE   3  (bases 1 to 981)
  AUTHORS   Gatchalian,J., Malik,S., Ho,J., Lee,D.S., Kelso,T.W.R.,
            Shokhirev,M.N., Dixon,J.R. and Hargreaves,D.C.
  TITLE     A non-canonical BRD9-containing BAF chromatin remodeling complex
            regulates naive pluripotency in mouse embryonic stem cells
  JOURNAL   Nat Commun 9 (1), 5139 (2018)
   PUBMED   30510198
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 981)
  AUTHORS   Alpsoy,A. and Dykhuizen,E.C.
  TITLE     Glioma tumor suppressor candidate region gene 1 (GLTSCR1) and its
            paralog GLTSCR1-like form SWI/SNF chromatin remodeling subcomplexes
  JOURNAL   J Biol Chem 293 (11), 3892-3903 (2018)
   PUBMED   29374058
REFERENCE   5  (bases 1 to 981)
  AUTHORS   Wischhof,L., Maida,S., Piazzesi,A., Gioran,A., Barragan Sanz,K.,
            Irsen,S., Beyer,M., Schultze,J.L., Dyer,M.J., Salomoni,P.,
            Ehninger,D., Nicotera,P. and Bano,D.
  TITLE     The SWI/SNF subunit Bcl7a contributes to motor coordination and
            Purkinje cell function
  JOURNAL   Sci Rep 7 (1), 17055 (2017)
   PUBMED   29213114
  REMARK    Publication Status: Online-Only
REFERENCE   6  (bases 1 to 981)
  AUTHORS   Klochendler-Yeivin,A., Muchardt,C. and Yaniv,M.
  TITLE     SWI/SNF chromatin remodeling and cancer
  JOURNAL   Curr Opin Genet Dev 12 (1), 73-79 (2002)
   PUBMED   11790558
  REMARK    Review article
REFERENCE   7  (bases 1 to 981)
  AUTHORS   Zhang,H.S., Gavin,M., Dahiya,A., Postigo,A.A., Ma,D., Luo,R.X.,
            Harbour,J.W. and Dean,D.C.
  TITLE     Exit from G1 and S phase of the cell cycle is regulated by
            repressor complexes containing HDAC-Rb-hSWI/SNF and Rb-hSWI/SNF
  JOURNAL   Cell 101 (1), 79-89 (2000)
   PUBMED   10778858
REFERENCE   8  (bases 1 to 981)
  AUTHORS   Phelan,M.L., Sif,S., Narlikar,G.J. and Kingston,R.E.
  TITLE     Reconstitution of a core chromatin remodeling complex from SWI/SNF
            subunits
  JOURNAL   Mol Cell 3 (2), 247-253 (1999)
   PUBMED   10078207
REFERENCE   9  (bases 1 to 981)
  AUTHORS   Jadayel,D.M., Osborne,L.R., Coignet,L.J., Zani,V.J., Tsui,L.C.,
            Scherer,S.W. and Dyer,M.J.
  TITLE     The BCL7 gene family: deletion of BCL7B in Williams syndrome
  JOURNAL   Gene 224 (1-2), 35-44 (1998)
   PUBMED   9931421
REFERENCE   10 (bases 1 to 981)
  AUTHORS   Wang,W., Xue,Y., Zhou,S., Kuo,A., Cairns,B.R. and Crabtree,G.R.
  TITLE     Diversity and specialization of mammalian SWI/SNF complexes
  JOURNAL   Genes Dev 10 (17), 2117-2130 (1996)
   PUBMED   8804307
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC005673.1.
            
            On Aug 28, 2003 this sequence version replaced NM_009746.1.
            
            Transcript Variant: This variant (2) differs in the 3' UTR and
            coding sequence compared to variant 1. The resulting isoform (2)
            has a shorter and distinct C-terminus compared to isoform 1.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC005673.1, BQ930905.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849380
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
FEATURES             Location/Qualifiers
     source          1..981
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="FVB/N-3"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 69.65 cM"
     gene            1..981
                     /gene="Bcl7c"
                     /gene_synonym="C230096E12Rik"
                     /note="B cell CLL/lymphoma 7C"
                     /db_xref="GeneID:12055"
                     /db_xref="MGI:MGI:1332237"
     exon            1..331
                     /gene="Bcl7c"
                     /gene_synonym="C230096E12Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             240..893
                     /gene="Bcl7c"
                     /gene_synonym="C230096E12Rik"
                     /note="isoform 2 is encoded by transcript variant 2;
                     B-cell CLL/lymphoma 7 protein family member C; B-cell
                     chronic lymphocytic leukemia/lymphoma 7C protein"
                     /codon_start=1
                     /product="B-cell CLL/lymphoma 7 protein family member C
                     isoform 2"
                     /protein_id="NP_033876.1"
                     /db_xref="CCDS:CCDS21874.1"
                     /db_xref="GeneID:12055"
                     /db_xref="MGI:MGI:1332237"
                     /translation="MAGRTVRAETRSRAKDDIKKVMATIEKVRRWEKRWVTVGDTSLR
                     IFKWVPVVDPQEEERRRAGGGAERSRGRERRGRGTSPRGGGPLILLDLNDENSNQSFH
                     SEGSLQKGAEPSPGGTPQPSRPGSPTGPPEVITEDTQPPQLGQERDPGGTPAGGTDEP
                     PKLTKEEPVPELLEAEAPEAYPVFEPVPSVPEAAQGDTEDSEGAPPLKRICPNAPDP"
     exon            332..410
                     /gene="Bcl7c"
                     /gene_synonym="C230096E12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            411..519
                     /gene="Bcl7c"
                     /gene_synonym="C230096E12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            520..681
                     /gene="Bcl7c"
                     /gene_synonym="C230096E12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            682..767
                     /gene="Bcl7c"
                     /gene_synonym="C230096E12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            768..965
                     /gene="Bcl7c"
                     /gene_synonym="C230096E12Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggccggggct ctagcagccc gcgccgcccg ggccgctccg gggacgggcc ggggcggggc
       61 gcggtcttag gaagccaggc ggggacgcgc ggaggcgttg gggagcgagg gagggcgcgg
      121 ccaactcccg gagggacggc aggccgaaag agcggcgctg gggcctggcg ctcagcctga
      181 gatcgccgga ccacaggccg ccccgccacg ggctctgtcc cggccccagc cccgccagca
      241 tggccggccg gaccgtgcgg gccgagaccc ggagccgggc caaagatgac atcaagaagg
      301 tgatggcgac catcgagaag gtccggagat gggagaagcg ctgggtgact gtgggagaca
      361 cttcccttcg aatcttcaag tgggtgcctg tggtggatcc ccaggaggag gagaggcggc
      421 gggcaggagg cggggcagag agatcccgtg gccgggagag acgtggtagg ggcaccagtc
      481 ccagaggggg aggccccctc atcctactgg atctcaatga tgagaacagc aaccagagtt
      541 tccattctga aggttcattg caaaagggtg ctgagcccag ccctgggggg acgccccagc
      601 ccagccgccc tggatcacca actggacccc cagaagtgat tactgaagat actcagcccc
      661 cacaattggg tcaggagaga gatccagggg ggacacctgc aggcggtact gatgaacccc
      721 caaagctgac caaggaggag cctgttccag aattgctaga agctgaggcc cccgaagctt
      781 accctgtctt tgagccagtg ccatctgtcc ctgaggcagc ccagggtgac acagaggact
      841 cggagggcgc ccccccactc aagcgcatct gtccaaatgc ccctgacccc tgagaagccg
      901 cctgcctcct gtcctgttgc tccaggggcc cctttggctt tttataaata aagacccttt
      961 tgtaaaaaaa aaaaaaaaaa a
//
