LOCUS       NM_198001                600 bp    mRNA    linear   ROD 12-JUN-2024
DEFINITION  Mus musculus bublin coiled coil protein (Bbln), mRNA.
ACCESSION   NM_198001
VERSION     NM_198001.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 600)
  AUTHORS   Bedogni,F. and Hevner,R.F.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 600)
  AUTHORS   Remmelzwaal,S., Geisler,F., Stucchi,R., van der Horst,S.,
            Pasolli,M., Kroll,J.R., Jarosinska,O.D., Akhmanova,A.,
            Richardson,C.A., Altelaar,M., Leube,R.E., Ramalho,J.J. and Boxem,M.
  TITLE     BBLN-1 is essential for intermediate filament organization and
            apical membrane morphology
  JOURNAL   Curr Biol 31 (11), 2334-2346 (2021)
   PUBMED   33857431
REFERENCE   3  (bases 1 to 600)
  AUTHORS   Yamakawa,T., Okamatsu,N., Ishikawa,K., Kiyohara,S., Handa,K.,
            Hayashi,E., Sakai,N., Karakawa,A., Chatani,M., Tsuji,M.,
            Inagaki,K., Kiuchi,Y., Negishi-Koga,T. and Takami,M.
  TITLE     Novel gene Merlot inhibits differentiation and promotes apoptosis
            of osteoclasts
  JOURNAL   Bone 138, 115494 (2020)
   PUBMED   32569872
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL808027.14.
            
            On Jan 10, 2022 this sequence version replaced NM_198001.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC049639.1, CK794751.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849380
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-174               AL808027.14        235043-235216       c
            175-600             AL808027.14        232459-232884       c
FEATURES             Location/Qualifiers
     source          1..600
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 22.09 cM"
     gene            1..600
                     /gene="Bbln"
                     /gene_synonym="1110008P14Rik"
                     /note="bublin coiled coil protein"
                     /db_xref="GeneID:73737"
                     /db_xref="MGI:MGI:1920987"
     exon            1..174
                     /gene="Bbln"
                     /gene_synonym="1110008P14Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             96..347
                     /gene="Bbln"
                     /gene_synonym="1110008P14Rik"
                     /note="UPF0184 protein C9orf16 homolog"
                     /codon_start=1
                     /product="bublin coiled-coil protein"
                     /protein_id="NP_932118.1"
                     /db_xref="CCDS:CCDS38103.1"
                     /db_xref="GeneID:73737"
                     /db_xref="MGI:MGI:1920987"
                     /translation="MSGPNGDLGMPVDAGTEGENDSFGEAEYAAINSMLDQINSCLDH
                     LEEKNDHLHARLQELLESNRQTRLEFQQQLGEAPGDASP"
     exon            175..600
                     /gene="Bbln"
                     /gene_synonym="1110008P14Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      582..587
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Bbln"
                     /gene_synonym="1110008P14Rik"
                     /note="hexamer: ATTAAA"
     polyA_site      600
                     /gene="Bbln"
                     /gene_synonym="1110008P14Rik"
                     /note="major polyA site"
ORIGIN      
        1 aaccagctgc tcgcaccttc cgcccagcgc cggctttccg cgcgacgatc gccaagttcc
       61 atcttcgcgt ggcctctgcg gcgcccgagc ccgcaatgtc gggccccaac ggggacctag
      121 gcatgccggt ggatgcgggc acggaaggag agaatgacag cttcggggaa gcagagtatg
      181 ctgccatcaa ctccatgttg gatcagatca actcttgtct ggaccacctg gaggagaaga
      241 atgaccacct ccatgcccgc ctccaggagc tgctggagtc gaaccggcag acgcgcctgg
      301 aattccagca acagcttggg gaggcccctg gcgatgccag cccctaggtg ccgggagccc
      361 ccatccaggc cctaccctca cctctctagg ccatgttctg gcctgggtag atactacttg
      421 gcttagacac catctcgggt actggcctcc agatcctagt gggtctacca gcctggacca
      481 gtccccattc actgcccatc acccttcctg gagtcaggtg caatcctaca gttctcccac
      541 ttgtctgtct tctttcccct ccatccagac tgagagtccg aattaaagat gtctcccaca
//
