LOCUS       NM_001045523            4428 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus bromo adjacent homology domain containing 1 (Bahd1),
            mRNA.
ACCESSION   NM_001045523 XM_130491 XM_917499 XM_980805
VERSION     NM_001045523.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4428)
  AUTHORS   Fan H, Guo Y, Tsai YH, Storey AJ, Kim A, Gong W, Edmondson RD,
            Mackintosh SG, Li H, Byrum SD, Tackett AJ, Cai L and Wang GG.
  TITLE     A conserved BAH module within mammalian BAHD1 connects H3K27me3 to
            Polycomb gene silencing
  JOURNAL   Nucleic Acids Res 49 (8), 4441-4455 (2021)
   PUBMED   33823544
REFERENCE   2  (bases 1 to 4428)
  AUTHORS   Pourpre R, Naudon L, Meziane H, Lakisic G, Jouneau L, Varet H,
            Legendre R, Wendling O, Selloum M, Proux C, Coppee JY, Herault Y
            and Bierne H.
  TITLE     BAHD1 haploinsufficiency results in anxiety-like phenotypes in male
            mice
  JOURNAL   PLoS One 15 (5), e0232789 (2020)
   PUBMED   32407325
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 4428)
  AUTHORS   Lakisic G, Lebreton A, Pourpre R, Wendling O, Libertini E, Radford
            EJ, Le Guillou M, Champy MF, Wattenhofer-Donze M, Soubigou G,
            Ait-Si-Ali S, Feunteun J, Sorg T, Coppee JY, Ferguson-Smith AC,
            Cossart P and Bierne H.
  TITLE     Role of the BAHD1 Chromatin-Repressive Complex in Placental
            Development and Regulation of Steroid Metabolism
  JOURNAL   PLoS Genet 12 (3), e1005898 (2016)
   PUBMED   26938916
  REMARK    GeneRIF: Biochemical analysis of the BAHD1-associated multiprotein
            complex identifies MIER proteins as novel partners of BAHD1 and
            suggests that BAHD1-MIER interaction forms a hub for histone
            deacetylases and methyltransferases
            Publication Status: Online-Only
REFERENCE   4  (bases 1 to 4428)
  AUTHORS   Zhu H, Wan X, Li J, Han L, Bo X, Chen W, Lu C, Shen Z, Xu C, Chen
            L, Yu C and Xu G.
  TITLE     Computational Prediction and Validation of BAHD1 as a Novel
            Molecule for Ulcerative Colitis
  JOURNAL   Sci Rep 5, 12227 (2015)
   PUBMED   26183847
  REMARK    GeneRIF: computational approaches leveraging public gene expression
            data can be used to infer potential genes or proteins for diseases,
            and BAHD1 might act as an indispensable factor in regulating the
            cellular inflammatory response in UC.
            Publication Status: Online-Only
REFERENCE   5  (bases 1 to 4428)
  AUTHORS   Lebreton A, Lakisic G, Job V, Fritsch L, Tham TN, Camejo A, Mattei
            PJ, Regnault B, Nahori MA, Cabanes D, Gautreau A, Ait-Si-Ali S,
            Dessen A, Cossart P and Bierne H.
  TITLE     A bacterial protein targets the BAHD1 chromatin complex to
            stimulate type III interferon response
  JOURNAL   Science 331 (6022), 1319-1321 (2011)
   PUBMED   21252314
  REMARK    GeneRIF: findings show a Listeria virulence factor, lmo0438/lntA,
            could target the chromatin repressor BAHD1 in host cell nucleus to
            activate interferon-stimulated genes; LntA-BAHD1 interplay may
            modulate IFN-lambda-mediated immune response to control host
            colonization
REFERENCE   6  (bases 1 to 4428)
  AUTHORS   Evsikov AV, Graber JH, Brockman JM, Hampl A, Holbrook AE, Singh P,
            Eppig JJ, Solter D and Knowles BB.
  TITLE     Cracking the egg: molecular dynamics and evolutionary aspects of
            the transition from the fully grown oocyte to embryo
  JOURNAL   Genes Dev 20 (19), 2713-2727 (2006)
   PUBMED   17015433
REFERENCE   7  (bases 1 to 4428)
  AUTHORS   Okazaki N, Kikuno R, Ohara R, Inamoto S, Koseki H, Hiraoka S, Saga
            Y, Nagase T, Ohara O and Koga H.
  TITLE     Prediction of the coding sequences of mouse homologues of KIAA
            gene: III. the complete nucleotide sequences of 500 mouse
            KIAA-homologous cDNAs identified by screening of terminal sequences
            of cDNA clones randomly sampled from size-fractionated libraries
  JOURNAL   DNA Res 10 (4), 167-180 (2003)
   PUBMED   14621295
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY261229.1, AK152597.1, AV148470.1, DV658691.1, DV653282.1 and
            AV266075.1.
            
            [WARNING] On Jan 17, 2024 this sequence was replaced by
            NM_001045523.2.
            
            On or before Sep 3, 2006 this sequence version replaced
            XM_917499.2, XM_130491.6, XM_980805.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC100358.1, AK129243.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-63                BY261229.1         1-63
            64-873              AK152597.1         2-811
            874-1048            AK152597.1         813-987
            1049-1049           AV148470.1         75-75
            1050-2851           AK152597.1         989-2790
            2852-3573           DV658691.1         18-739
            3574-3683           AK152597.1         3514-3623
            3684-3801           DV653282.1         582-699
            3802-4418           AK152597.1         3741-4357
            4419-4428           AV266075.1         250-259
FEATURES             Location/Qualifiers
     source          1..4428
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 59.72 cM"
     gene            1..4428
                     /gene="Bahd1"
                     /gene_synonym="Gm117; mKIAA0945"
                     /note="bromo adjacent homology domain containing 1"
                     /db_xref="GeneID:228536"
                     /db_xref="MGI:MGI:2139371"
     exon            1..143
                     /gene="Bahd1"
                     /gene_synonym="Gm117; mKIAA0945"
                     /inference="alignment:Splign:2.1.0"
     exon            144..1565
                     /gene="Bahd1"
                     /gene_synonym="Gm117; mKIAA0945"
                     /inference="alignment:Splign:2.1.0"
     CDS             158..2476
                     /gene="Bahd1"
                     /gene_synonym="Gm117; mKIAA0945"
                     /note="BAH domain-containing protein 1"
                     /codon_start=1
                     /product="bromo adjacent homology domain-containing 1
                     protein"
                     /protein_id="NP_001038988.1"
                     /db_xref="CCDS:CCDS38202.1"
                     /db_xref="GeneID:228536"
                     /db_xref="MGI:MGI:2139371"
                     /translation="MTHTRRKSLPMLSSGPTGRGEPLQMEDSNMEQGTEDVEPGMPES
                     PGHLTGRRKNYPLRKRSLVPEKPKACKVLLTRLENVAGPRSADEADELPPDLPKPPSP
                     TSSSEDAGLVQPRKRRLASLNAEALNNLLLEREETSSLAGARRSRGGDPHRSRDRATG
                     SWSFSKKRPRLGDLGEGSRDLSPELAPDEGARRDGDPAPKRLASLNAAAFLKLSQERE
                     LPLRPSRAQAEADGRSTEPLAPRILRPKVNGKNCPKARQGAGSGEATGPPNWQEQPNE
                     RWPSAPPHGPPTQPSHQAPGKALENPLRPNLPLLMGGQAALKPEPGRPGEESPAPKQE
                     LHQPSFPAPQLSPLPMPGNPADYSGPCGGPELTALGSFYLYCGQDGLQCGAYSPCPML
                     PEGKLSPVAAPNEGLLMAPSSVPSGVPFQHPPWSAPRYCSSEDTGANGYSICGVLPLS
                     LTHIGTTCGGCPYKMPFTAEGCRSLGQLEFPLPEAGHPASPAHPLLGCPVPSVPPAAE
                     PIPHLQTPISEPQTVARACPQSAKPPSGSKSGLRTGSSCRHAVRSKAARRPSHPKQPR
                     AQRPRPRRRRRRRTNGWVPVGAACEKAVYVLDEPEPAIRKSYQAVERHGETIRVRDTV
                     LLKSGPRKTSTPYVAKISALWENPESGELMMSLLWYYRPEHLQGGRSPSMHEPLQNEV
                     FASRHQDQNSVACIEEKCYVLTFAEYCRFCAMAKRRGEGLPSRKTALVPPSADYSTPP
                     HRTVPEDTDPELVFLCRHVYDFRHGRILKNPQ"
     exon            1566..1948
                     /gene="Bahd1"
                     /gene_synonym="Gm117; mKIAA0945"
                     /inference="alignment:Splign:2.1.0"
     exon            1949..2108
                     /gene="Bahd1"
                     /gene_synonym="Gm117; mKIAA0945"
                     /inference="alignment:Splign:2.1.0"
     exon            2109..2185
                     /gene="Bahd1"
                     /gene_synonym="Gm117; mKIAA0945"
                     /inference="alignment:Splign:2.1.0"
     exon            2186..2286
                     /gene="Bahd1"
                     /gene_synonym="Gm117; mKIAA0945"
                     /inference="alignment:Splign:2.1.0"
     exon            2287..4428
                     /gene="Bahd1"
                     /gene_synonym="Gm117; mKIAA0945"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggccccggcc cccaggagga ggcgctgacg cagcagcgtg gagcccggga attgagcgcc
       61 cccggggggt tccagccgcc ggattccagc ccggccaggg cctgcgggcg cccgaagccg
      121 cgccgtccgc gcctctcgtc ccgcttggag ggattccatg acacacactc ggaggaagtc
      181 ccttcctatg ctaagttccg gccccactgg ccgaggggaa cccctgcaga tggaagacag
      241 caatatggag caggggactg aagacgtgga gccgggcatg cctgagagcc ctgggcacct
      301 tacggggcgc cgcaagaact acccattgcg caaacgttca ctggttcccg agaagcccaa
      361 agcctgcaaa gtgctgctga ctcgcctgga aaacgtggct ggcccgcgaa gcgcagatga
      421 ggcagatgag ctgccccctg acctgcccaa gcccccgagt ccgacctcgt ccagtgagga
      481 tgctggtctc gtgcagcccc gcaagcggcg cctcgcctcc cttaatgcag aggcccttaa
      541 taatctgcta ctggagaggg aggagaccag cagcctggca ggtgcccgcc gaagcagagg
      601 cggggaccct caccgtagcc gggaccgggc cacggggtcc tggtctttct ccaagaagcg
      661 acctaggctg ggtgatcttg gagaaggaag tagggacctg tccccagagc tagccccaga
      721 tgaaggtgcc cgtcgagatg gagacccggc tcccaagaga ctggctagct taaacgccgc
      781 tgccttctta aaactcagcc aggagcggga gctacctctt cgaccttctc gtgctcaagc
      841 agaagcagat gggcgctcca ccgagcccct ggcacccagg atcctgcggc caaaggtcaa
      901 cggcaagaac tgtcccaagg ctcggcaagg agctggctct ggggaggcta cagggcctcc
      961 caactggcaa gagcagccca atgagcgttg gccgtctgct cctcctcatg ggccacccac
     1021 ccagccatct caccaggccc caggcaaggc tctggagaac ccgttgcgcc ccaacctgcc
     1081 tctgctgatg ggtgggcagg cagccctgaa gccagagcct gggcgtccag gagaggagtc
     1141 acctgccccc aagcaggaac tgcatcagcc ctccttccct gcgcctcagc tgtctccgct
     1201 gccgatgcct ggcaacccag ccgactacag tggtccatgt ggtgggcctg agctcacagc
     1261 gctgggcagc ttctacctgt actgtggcca agatgggctg caatgtgggg cttactcccc
     1321 ttgccccatg ctcccagaag gcaagctgtc tccggtggca gcccccaatg aggggctgct
     1381 catggccccc agctcagtgc cctctggcgt ccctttccag caccctcctt ggagcgcacc
     1441 tcgctactgc tccagtgagg acactggagc gaatggctac agcatctgtg gagtgttgcc
     1501 tctgtctctc acacacattg gcactacctg tggtggctgc ccctacaaaa tgccttttac
     1561 cgcagaaggc tgcaggtcgc tcggccaatt ggaatttcct ctcccagaag ctggccaccc
     1621 agcctcacct gctcaccccc tcctgggatg ccctgtgccc agtgtgccac ctgctgcaga
     1681 gcctatcccc catcttcaga cgcccatctc ggagccccag acagtagccc gggcgtgccc
     1741 tcagagcgcc aagcctccga gtggctccaa gtcaggtctg cgcacaggct ccagctgccg
     1801 gcacgctgtg aggagcaagg ctgcccgcag gcccagccac cccaagcagc cgcgtgccca
     1861 gcgcccacgt cctcgccgcc gccggcgccg ccgcactaat ggctgggtgc ctgtaggtgc
     1921 tgcctgtgag aaggcagtgt atgtcctgga tgagccagaa cctgccatcc gaaagagtta
     1981 ccaggcagtc gagcgacatg gagagacaat ccgggtccga gacactgtcc tcctcaagtc
     2041 aggcccaaga aagacgtcta caccttatgt ggccaagatc tctgccctct gggagaaccc
     2101 tgagtcagga gagctgatga tgagcctcct gtggtattac aggcctgagc acttacaggg
     2161 aggtcgcagc cccagcatgc atgagccttt gcagaatgaa gtttttgcat caagacatca
     2221 ggaccagaac agtgtggcct gcattgaaga gaagtgctat gtgctaacct ttgctgagta
     2281 ctgcagattc tgtgccatgg ccaagcgccg gggtgagggc cttcccagcc ggaagacagc
     2341 actggtgccc ccatctgcag actactccac cccaccacac cgcacagtgc cggaggacac
     2401 ggaccctgag ctggtgttcc tttgccgcca tgtctatgac ttccgccatg gccgcatcct
     2461 caagaacccc cagtagcctc ttgatgctca cagtggggct gccttcggga gagtggggcc
     2521 tggggcaggg gcactgcttg aagcacagca cttggttagg ggccatgggt tgctggcctg
     2581 tggttctctt tggggggagg gagggcaggg gccctatgga gaaagggagg ccaggatatg
     2641 agaaaggtat ctagaccctc agcttggcct ggggtgccca tctctgcacc ccagggtgga
     2701 gactcctgaa gattccgtct tccctgaggt tgggccaggc ctgagggacc tggccaagga
     2761 agggcaggga caagtagaag gggtaaggtc cttccagaac caggcctacc aggccctttt
     2821 ctagcctccc caaggccttc caaggggagc aggagccagc tttacctcac ccactgtgac
     2881 ccgctgcttc cctgtcagcc tgggaccagg ctctgcagat tctagcacag ctctggcttg
     2941 ttccggtgaa taagagagcc gagctttgac ttcctcttcc tggactcgag gcttatccct
     3001 ggctttcttc ctttaccgct gcagtagcca ctggtgctgg cacaagttga ccctgcccac
     3061 ccatgggtgt cagcctcatg tcagcttgcc attaagggtc acccagcagg tctggcttcc
     3121 cagaatactg gtcaacatgg agtttatcat gtctgggaga gagggtgggg gcaggggaca
     3181 aggaaaattg ctacctgatt cgctgaagat ttttcctctt gccttattct tggaggttct
     3241 gggaaacctc ttgcagaact tcacacgtga ctcttcaagc cacacccacc tgaaatcaaa
     3301 ccaaaggaga gttgtggctc ctcttgccct gccacccctt accctagtct ttcgtagatt
     3361 gcactaattt ccatcccagt gagaatcaac actgtatcag tccaccgacc tgagctgcag
     3421 ccacttcctc tgggggctcg gccctgcatt ttcagttcat tcctgttgcc cagagattgt
     3481 tctagcctca cgctccccac cagtgattga tcagaaggct cagtcccctg ctggcctggg
     3541 ctgaggggct gaagcctggt cacttgtacc ttgtttgtac caaagaggag catgggctca
     3601 gggagggtgc agtgcaggga agtgtggtgt gcctggggcc cagcgctggc cacttgccat
     3661 ccaggcatgt tcgggggagg ggggtataca ctgtggaaga tggcactagg tcctccctag
     3721 agaggggaga cacgggtcca gcagtctggg gacacggcac tggggtgagg atagtctgac
     3781 acaggctgca ttgggaggtg gaagtgaacc ctgaaggcaa agacccggca accccaggtc
     3841 caggccctga tccgtggaag ataaactgtt cctgatgggt aattgggctg ggtaggcctg
     3901 aaggcttcac aggttaattt tttgttgttg ttttggaagc cctatcccaa acccaaaggg
     3961 aagacttcac atggaataag ctctttggag gaagtcatca gtttgaaaga gcaaggcata
     4021 agaaacaagt tgtcaagagt ggagatggac ccctttggag cctgctcgtt ctagggtgct
     4081 accaaggagc ccagcctcac ccacaggaga ggagatcagg ccctcctagg aggcaggggg
     4141 gctgctgccc agatgttaaa tgcttttgga atctctttag atgtggaaat attttttcga
     4201 acatgaaaat gcagctggta gaatttcaat ggaagtataa tccatgtaaa atatatttta
     4261 gttgatattt tgtaaaatgc actttttgtg tgtgtcgatc ctggtttccc agatctgtat
     4321 ttcagtgttt acaagggagg gggtaccttt cctaacctcc cttttgacag agattagaag
     4381 tacttcttta agaaaaataa ataaatttga gaaattgtat tgatttag
//
