LOCUS       NM_001040700            2030 bp    mRNA    linear   ROD 29-JUL-2024
DEFINITION  Mus musculus cDNA sequence BC051019 (BC051019), mRNA.
ACCESSION   NM_001040700
VERSION     NM_001040700.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2030)
  AUTHORS   Amid,C., Bahr,A., Mujica,A., Sampson,N., Bikar,S.E.,
            Winterpacht,A., Zabel,B., Hankeln,T. and Schmidt,E.R.
  TITLE     Comparative genomic sequencing reveals a strikingly similar
            architecture of a conserved syntenic region on human chromosome
            11p15.3 (including gene ST5) and mouse chromosome 7
  JOURNAL   Cytogenet Cell Genet 93 (3-4), 284-290 (2001)
   PUBMED   11528127
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC051019.1.
            
            On Jul 23, 2006 this sequence version replaced NM_001040700.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC051019.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849376 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
FEATURES             Location/Qualifiers
     source          1..2030
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 57.45 cM"
     gene            1..2030
                     /gene="BC051019"
                     /gene_synonym="D7H11orf16; ICRFP703B1614Q5.5"
                     /note="cDNA sequence BC051019"
                     /db_xref="GeneID:57355"
                     /db_xref="MGI:MGI:1928824"
     exon            1..368
                     /gene="BC051019"
                     /gene_synonym="D7H11orf16; ICRFP703B1614Q5.5"
                     /inference="alignment:Splign:2.1.0"
     exon            369..553
                     /gene="BC051019"
                     /gene_synonym="D7H11orf16; ICRFP703B1614Q5.5"
                     /inference="alignment:Splign:2.1.0"
     CDS             387..1595
                     /gene="BC051019"
                     /gene_synonym="D7H11orf16; ICRFP703B1614Q5.5"
                     /note="ICRFP703N2430Q5.5"
                     /codon_start=1
                     /product="uncharacterized protein C11orf16 homolog"
                     /protein_id="NP_001035790.1"
                     /db_xref="CCDS:CCDS40084.1"
                     /db_xref="GeneID:57355"
                     /db_xref="MGI:MGI:1928824"
                     /translation="MQPSASPGLPLPKYCSVATTVKAPDLHGAVPPWDMSFTCPFATQ
                     APWLATHCTFTRCTACCPCLHTVDRPWPGLRWLGRVGAAGGSWVLARKEPDGFYYLAQ
                     IKAAPELEKRGALVVEFEAPLVTGLELPAQQQRVVFPEDVIQFSPSVPHSLQLGDKVL
                     APWEPGQQRYGPGTVLVGLKKQKGQRASKEKEITVHFWNGKTTKVPLGSVRWVPPTVW
                     KKAVERLQAPHTRDCHSSCLWVPHCSQLGPRAGCTTHRHPLDSSFLCPPCLSCACCQL
                     QCQSSCPLVGPSWWPLTRTSELTTRKLPEPEVKPTAQLLPLQGPKEEPVAELSYNMFS
                     SSSSSSEEENSESHLEMGLPLRQMVSRAVNTDPILSETTSLQQYSPHKPEWRYWRRNG
                     PEPPPGKPGR"
     exon            554..710
                     /gene="BC051019"
                     /gene_synonym="D7H11orf16; ICRFP703B1614Q5.5"
                     /inference="alignment:Splign:2.1.0"
     exon            711..945
                     /gene="BC051019"
                     /gene_synonym="D7H11orf16; ICRFP703B1614Q5.5"
                     /inference="alignment:Splign:2.1.0"
     exon            946..1587
                     /gene="BC051019"
                     /gene_synonym="D7H11orf16; ICRFP703B1614Q5.5"
                     /inference="alignment:Splign:2.1.0"
     exon            1588..1942
                     /gene="BC051019"
                     /gene_synonym="D7H11orf16; ICRFP703B1614Q5.5"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1923..1928
                     /regulatory_class="polyA_signal_sequence"
                     /gene="BC051019"
                     /gene_synonym="D7H11orf16; ICRFP703B1614Q5.5"
                     /note="hexamer: AATAAA"
     polyA_site      1942
                     /gene="BC051019"
                     /gene_synonym="D7H11orf16; ICRFP703B1614Q5.5"
                     /note="major polyA site"
ORIGIN      
        1 gcggctttgg gcaggggtag accctaacaa gctctaggcg gcagctgctg cctctgaaga
       61 agtccacaaa tgggatgatc ctgagtcctg taggtgacca ggttaggagg ggagttggtg
      121 gcttctgctg ggggtcagtt ggtcagggca gggtgtgtaa agagaatgag catgctccaa
      181 ggagtcccag ccactgggga ggaggaagga ggtaacacca acgggagccg agctgccagg
      241 tatttccgtg gctcatcttt ggagacttaa cagtgagcgt gcaggttctg aaggaggatt
      301 aaagagggct ctctaagctc ctagcttaag ttcttcagcc ctccctagtc ccccagggac
      361 attctaaggt gggcgcgctg aaggtcatgc agccctctgc cagtcctggg ctgccactgc
      421 ccaaatactg cagtgtggcc acaaccgtga aagcccctga cctgcatggt gctgtgccgc
      481 cctgggacat gtccttcacc tgtccctttg ccacgcaagc accctggctg gccacgcact
      541 gcacattcac caggtgcact gcctgttgcc catgtcttca cactgttgat cggccatggc
      601 cggggctccg ctggctggga agagtcggag ctgcgggcgg ctcctgggtc ctggccagaa
      661 aggaaccgga tggcttttat tatctggctc agataaaggc tgctccagag ctggagaagc
      721 ggggggccct ggttgtggaa tttgaggctc cccttgtcac aggcctagag ctgccagccc
      781 agcagcagag ggtggtattt ccagaggatg ttattcagtt ttcaccatct gtgccacact
      841 cactgcagct gggtgacaag gtgttggcac cctgggaacc ggggcagcag cggtatggcc
      901 ccggcactgt tctagtgggc ttgaagaagc aaaaaggaca aagagcatct aaagaaaaag
      961 aaatcactgt tcatttctgg aatggcaaga caactaaggt gcctctaggc agcgtcaggt
     1021 gggtgccccc cacggtctgg aagaaggctg tggaaagact acaagcacct cataccaggg
     1081 actgccacag ttcttgtctc tgggtacctc actgctctca gctgggaccc cgtgctggat
     1141 gcaccacaca caggcatcct ctggactctt ccttcttatg ccctccctgc ctctcctgtg
     1201 cctgctgcca gcttcagtgc cagagcagct gccctttggt ggggccgagc tggtggcctc
     1261 taactaggac ttcagagctc acaaccagaa aactcccgga gccagaggtg aagcccacag
     1321 ctcagctttt gcccctacaa ggtcctaagg aggagccggt ggcagagctc agctacaata
     1381 tgttctcctc ctcctcctcc tcttccgagg aagaaaattc agagagtcat ctggagatgg
     1441 ggctgcctct gagacagatg gtaagcaggg cagtcaacac tgaccccatc ctttctgaga
     1501 cgacatctct gcagcagtac agcccccaca agcccgagtg gaggtactgg aggagaaatg
     1561 ggcctgaacc accgcctgga aagccaggac gttaaaggat catgaggtaa aacacttgaa
     1621 aagggcttac aacgagtagt tgacaacgga actggaggag gctgagcggt ggcggacaag
     1681 agtgcctaag agcagctgct ctcctgagac ctgaggggag cggcattcag aagcacctgt
     1741 tgtgaggggc acagagctgg tgggcctgta ctgaaactcc ctgccagtgg cctgatgaac
     1801 tgcttaggac acctattcat gggagggacg ggtgtgccca ttgcattggg caaatgcatc
     1861 ccatttgtct tctcataaag cctacaatgt gggaaacatt gtctttttat ctttttaata
     1921 gcaataaaat gaattctttt taaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     1981 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//
