LOCUS       NM_001193274             690 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus cDNA sequence BC048679 (BC048679), transcript variant
            1, mRNA.
ACCESSION   NM_001193274
VERSION     NM_001193274.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 690)
  AUTHORS   Penttinen J, Pujianto DA, Sipila P, Huhtaniemi I and Poutanen M.
  TITLE     Discovery in silico and characterization in vitro of novel genes
            exclusively expressed in the mouse epididymis
  JOURNAL   Mol Endocrinol 17 (11), 2138-2151 (2003)
   PUBMED   12920233
REFERENCE   2  (bases 1 to 690)
  AUTHORS   Mu X, Zhao S, Pershad R, Hsieh TF, Scarpa A, Wang SW, White RA,
            Beremand PD, Thomas TL, Gan L and Klein WH.
  TITLE     Gene expression in the developing mouse retina by EST sequencing
            and microarray analysis
  JOURNAL   Nucleic Acids Res 29 (24), 4983-4993 (2001)
   PUBMED   11812828
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BG803866.1, BC048679.1 and BB073717.1.
            
            Transcript Variant: This variant (1) represents the longer
            transcript and encodes the longer isoform (1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC048679.1, CA466057.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849381 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-49                BG803866.1         1-49
            50-689              BC048679.1         1-640
            690-690             BB073717.1         233-233
FEATURES             Location/Qualifiers
     source          1..690
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 45.71 cM"
     gene            1..690
                     /gene="BC048679"
                     /note="cDNA sequence BC048679"
                     /db_xref="GeneID:210321"
                     /db_xref="MGI:MGI:3510776"
     exon            1..99
                     /gene="BC048679"
                     /inference="alignment:Splign:2.1.0"
     CDS             100..618
                     /gene="BC048679"
                     /note="isoform 1 is encoded by transcript variant 1;
                     epididymal protein Av381126"
                     /codon_start=1
                     /product="uncharacterized protein LOC210321 isoform 1"
                     /protein_id="NP_001180203.1"
                     /db_xref="CCDS:CCDS57558.1"
                     /db_xref="GeneID:210321"
                     /db_xref="MGI:MGI:3510776"
                     /translation="MSFKCQSLISTQTLVGASSTIQFFFSEALMGQNFQEVELENYEP
                     QPGDLFLFKLQTPKAQWCGAHVGVYCGQGEIIHFEGRTSNQNGVQTFLGYCEGVVCKQ
                     GHRALQRSRQLWRVLRRRGGVDPRVLESRVREAMDNDPPPYHPTSSNCVHFALNLLGM
                     DSMSMDRNLTSD"
     exon            100..117
                     /gene="BC048679"
                     /inference="alignment:Splign:2.1.0"
     exon            118..135
                     /gene="BC048679"
                     /inference="alignment:Splign:2.1.0"
     exon            136..337
                     /gene="BC048679"
                     /inference="alignment:Splign:2.1.0"
     exon            338..585
                     /gene="BC048679"
                     /inference="alignment:Splign:2.1.0"
     exon            586..690
                     /gene="BC048679"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggacttcctg gttagcccct ttatctgcta gctccacggc caacttgccc tctttcctct
       61 ggccacagaa gacaaaggga gtgaggtggt cactgcaaga tgagcttcaa gtgccagtcc
      121 ctcatctcaa cccagaccct ggtaggagca tccagcacca ttcagttctt cttctctgag
      181 gcactcatgg gtcagaactt ccaggaggtg gagttagaaa actacgagcc tcagcctgga
      241 gacctgttcc tgttcaagtt gcagacccct aaggcacagt ggtgcggggc ccacgtgggt
      301 gtttactgcg gccaaggaga gatcatacac tttgagggca ggacctccaa ccagaatgga
      361 gtacaaacgt ttctgggtta ctgtgagggt gtcgtgtgta aacaggggca cagagctctg
      421 cagcgctccc gacagctctg gcgtgtgcta cgcaggcgcg gtggcgttga ccctagggtg
      481 ctggagagcc gcgtgcgaga agctatggac aacgatcctc ctccctacca tcccactagc
      541 agcaactgtg tgcactttgc actgaacctg ttgggcatgg actcaatgtc aatggacagg
      601 aacctaacca gtgattaatg tgaccttggg tcctcctgaa tgggccaaaa gaggtttcag
      661 aagggatcat taaagtattt tcccaaacgt
//
