LOCUS       NM_177738               1211 bp    mRNA    linear   ROD 26-JUN-2024
DEFINITION  Mus musculus cDNA sequence BC048671 (BC048671), transcript variant
            1, mRNA.
ACCESSION   NM_177738
VERSION     NM_177738.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1211)
  AUTHORS   Nguyen,T.T.T., Tokuhiro,K., Shimada,K., Wang,H., Mashiko,D.,
            Tonai,S., Kiyozumi,D. and Ikawa,M.
  TITLE     Gene-deficient mouse model established by CRISPR/Cas9 system
            reveals 15 reproductive organ-enriched genes dispensable for male
            fertility
  JOURNAL   Front Cell Dev Biol 12, 1411162 (2024)
   PUBMED   38835510
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC122521.4 and AK077180.1.
            
            On Nov 26, 2017 this sequence version replaced NM_177738.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK077180.1, SRR5189685.73877.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384, SAMN00849390
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-51                AC122521.4         83223-83273
            52-1211             AK077180.1         3-1162
FEATURES             Location/Qualifiers
     source          1..1211
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="6"
                     /map="6 40.12 cM"
     gene            1..1211
                     /gene="BC048671"
                     /note="cDNA sequence BC048671"
                     /db_xref="GeneID:243535"
                     /db_xref="MGI:MGI:2679261"
     exon            1..133
                     /gene="BC048671"
                     /inference="alignment:Splign:2.1.0"
     exon            134..588
                     /gene="BC048671"
                     /inference="alignment:Splign:2.1.0"
     exon            589..714
                     /gene="BC048671"
                     /inference="alignment:Splign:2.1.0"
     CDS             626..1039
                     /gene="BC048671"
                     /codon_start=1
                     /product="uncharacterized protein C3orf22 homolog"
                     /protein_id="NP_808406.1"
                     /db_xref="CCDS:CCDS20357.1"
                     /db_xref="GeneID:243535"
                     /db_xref="MGI:MGI:2679261"
                     /translation="MDSKGHKKPCRHKKKEIKTYERFVKKFPYRLPHLTEPSTSCPPS
                     CKAKSNSLKDKLPLQKNLVPTRSIPIPGLGAPQVAWPFSFYSPPPHPPLCNLWELKLL
                     QLRFPTQDLPRLPPLQTPDNQPLTSGISKPPESIP"
     exon            715..840
                     /gene="BC048671"
                     /inference="alignment:Splign:2.1.0"
     exon            841..1211
                     /gene="BC048671"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 actcaatggt gttctagtcc aaggttccaa aggccttcca cagtactccc caaaacacat
       61 ggtcacatcc cactcagggt accaacttct tagggttgtt attgatgtgg actatccaga
      121 acaacttaca gtgctgggga cagcacttgc agcatgtgag ccttctggga gagtctgaac
      181 cacccagctg taagaaatgt gttctcatct ggctcttcca acttcgagtc cagtcttttg
      241 tcaaccccag ccactccaag gtggtcccag tgaagaacca gcaacttttg ttcaaactct
      301 cagtgccttc acctggcttc cctgctgttc actttgagtc acttgtctag gaaactgggg
      361 tagggactct tctggcccag aggagagaag aaagaaagcc taaatctagg cttaaggatt
      421 tgagctgtct gctgaggatt cagtctcctg tacaaccctg gtttggtcac ctgaaacaac
      481 ccacttgcct actctttggc atctcctgac agcactggcc acatcctcag acctctcaac
      541 ccatctcatt gcctggctcc tctgtttcta ttctctctcc ttatcaagcc ccctctgtgc
      601 aggacacagc ctaactccct ctgtgatgga ctcaaaaggc cacaagaagc cctgccggca
      661 taagaagaag gaaatcaaga cttatgagag atttgtcaag aagtttcctt acaggttacc
      721 tcatttgacg gagcctagca catcatgccc accatcttgt aaggccaaga gcaactcact
      781 gaaggacaaa ctgcccttac agaagaatct ggtgccaaca cggtccatcc ccatcccagg
      841 gctcggcgct ccgcaagtcg catggccatt cagcttctac tcaccacccc cacatccccc
      901 actgtgtaac ctctgggaac ttaaattact gcagctccgt ttccccacac aagatcttcc
      961 caggctgcct cctctgcaga cccctgacaa ccagcccctc accagtggga tttcaaagcc
     1021 acctgagagc attccctaga atgcctgctt ttcaaggctc ctttcttagc ctcattctct
     1081 ctgctccaga cagctgcctc agagacattt gtaaagggag cagccttgta gaccactaaa
     1141 aaaccaggag tggtccatcc cccacatgca aagaccatac agcaccaata aactttgcag
     1201 gttcaaatcc c
//
