LOCUS       NM_001254946            2612 bp    mRNA    linear   ROD 05-AUG-2023
DEFINITION  Mus musculus cDNA sequence BC035044 (BC035044), transcript variant
            1, mRNA.
ACCESSION   NM_001254946
VERSION     NM_001254946.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2612)
  AUTHORS   Hansen GM, Markesich DC, Burnett MB, Zhu Q, Dionne KM, Richter LJ,
            Finnell RH, Sands AT, Zambrowicz BP and Abuin A.
  TITLE     Large-scale gene trapping in C57BL/6N mouse embryonic stem cells
  JOURNAL   Genome Res 18 (10), 1670-1679 (2008)
   PUBMED   18799693
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC035044.1 and AC102693.9.
            
            Transcript Variant: This variant (1) encodes the longer isoform
            (1).
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK088258.1, BC035044.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849380, SAMN00849381
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1564              BC035044.1         1-1564
            1565-2612           AC102693.9         52031-53078
FEATURES             Location/Qualifiers
     source          1..2612
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="6"
                     /map="6 63.1 cM"
     gene            1..2612
                     /gene="BC035044"
                     /note="cDNA sequence BC035044"
                     /db_xref="GeneID:232406"
                     /db_xref="MGI:MGI:2448540"
     exon            1..308
                     /gene="BC035044"
                     /inference="alignment:Splign:2.1.0"
     CDS             158..574
                     /gene="BC035044"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /codon_start=1
                     /product="uncharacterized protein LOC232406 isoform 1"
                     /protein_id="NP_001241875.1"
                     /db_xref="CCDS:CCDS57450.1"
                     /db_xref="GeneID:232406"
                     /db_xref="MGI:MGI:2448540"
                     /translation="MSRRHCCDKLKELLWDFSASWTHFKSSGKVTTHGCGGGVVRVSA
                     ADNGETGLIMCVCNEDHLNKAMCSDPEFLPISRVTMSESLIVPETHSMKQITDKLPRY
                     SMDVFKKFKQRTEGPLLASPRNTGQQCQAASRPTTL"
     exon            309..450
                     /gene="BC035044"
                     /inference="alignment:Splign:2.1.0"
     exon            451..2612
                     /gene="BC035044"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cacaacctct ttgcatagta tttgctggtg agattcttaa aaatttctga actcagagca
       61 tgattctgtg taggcgatgc tatgggtatg atccctcagc atctcaccag cagtgcatgt
      121 ttctgacaca ctactgatta gcactgcact gtgagtgatg agcagaaggc attgctgtga
      181 caagctgaaa gaactcttgt gggacttctc tgcttcatgg acccatttta agtcatctgg
      241 aaaggtgact actcatggct gtggcggagg agtggtgaga gtgtctgcag cagacaacgg
      301 ggaaacaggt ctcataatgt gcgtatgcaa tgaggatcat ttaaataagg cgatgtgctc
      361 agaccctgag tttcttccta tcagcagagt caccatgagt gagtctttaa tagttcctga
      421 aacccattcc atgaagcaga tcacggacaa gttgcctaga tattccatgg atgttttcaa
      481 gaaattcaag caaagaactg agggccccct gctggcctct cctagaaaca caggtcaaca
      541 atgccaggca gcttccaggc caacaacact ctagtctgct gtgtggtgca tctctgctgt
      601 gctggctatt tagtcatctg acctccacat tcacagcaca tgatcagtac ggggaaaggc
      661 tgcacatgga gggcactttc ctcagaggtg actaacaggt ctcaaaaata agttctctga
      721 caacctgctc agcccacgaa cctgggagac ttgacactga gtccaggact ccaggagaca
      781 ctgagtcagg gcgggaagaa aactcaacag ggagactaga cagacttgga caccgctggt
      841 tcttgcccat tggtcctctc atcagcctcc ttcagatgta gacatctcca tcaaggagtc
      901 tgtagctcag aagaactatc tctgtcccgg ctatagacgt ccttgccagg gacgctgcaa
      961 gatgtttaag aatgttacaa ttttctgttc tttaagctaa aggataaaga ccgtggacaa
     1021 aaccagattc tcatactgtt tcatcagtac aaggttgttg tcttcatttc ttttcctgtt
     1081 gctgtaatag aataccttct tggataaagg agatttaagg agagaagagt ttattttagc
     1141 tcacagttca aactacagcc tgtcaataca gagaagtcaa agcagcagaa gttggagcag
     1201 ctggtcacgt ggaatccacc acgaggaaga agaatggact cgtgtccagt ttgctttctc
     1261 catttataca ctcgagagtc cataaggaat ggttcagccc acagttaaga tggctccttc
     1321 aacattttca gaaactcagg ttactctaaa ggatgacccc tcacaagtat gcccagaggc
     1381 atgtaccatg ggtggctcta taaagtgtgt caagttgcta attaacacta atcatcacag
     1441 ttttgttcct taaaagattc aaaagaatta taatgagcaa acattctgat atattaacac
     1501 tgtgttgttc tgggctctga aatgctttgt gcaagtatta aaatattaat gctatttaaa
     1561 aacagatttt gatgttagct tgttgctggt ttttcctctg cactgtgtta ataagacttc
     1621 atctctgatt atctggaaga agtttaaagc agaaagcatt tctctgtgct ctatttcaga
     1681 agttttagtc ccggtatatt atttctaggc ctacggagat gcagaactca atgtcaggga
     1741 acacgtgaga gagcagagct ccccttctaa caggggtaat tgggagacca cagaggaacc
     1801 acaggtaagg cagacacctc cagtatcttc cagcaggtag gcttcatctc agaacgttgc
     1861 cctcccctca ctattgtgag gctgtacatt atgaagccat gtgtggatca acccattggc
     1921 agagactgag ccctcttgat ccaatcacct ctctcactct cacagcatcc atcctgtgta
     1981 gaccaagtgt cccacactca gcctctgcag ggcccttgac atctgaccat aacagaggtg
     2041 acagaggaat attgtcacat gctcatgaat ccaggcatgg catgtgacta ctgaagtcaa
     2101 ctcaactatt aagagtacct tactgctggg tgttttaaga accaggatgt aatttccctt
     2161 attctcgtta tcacagcaga caacatggcc aaagctacct tgtgcctgtg gatcgtagaa
     2221 tgaaatagag gcaaaacaaa ttctcctagc aacctcagtg ggcacactgt gaattcctgt
     2281 atatttgaaa ggaagtctcc agttctctcc caccaatcag tctgtctgtc tgtctgtctg
     2341 tgtataagca tgcatgcttt ctgtgtcagt ctcagatcct cacttctcat gcaagcactc
     2401 tagccccctg agaaacaact tgagatcttc catctccaca tttcccatct ctgtctgaaa
     2461 tgactccagc cctgctatgt tccttgattg aagacttgaa gaaactaggg tgagagtagc
     2521 cagctcagct atcccacact tctgacctgc aggctcttgt ataaaatgat agttgttaat
     2581 aaatcactaa atttttgagt aatttcttta ac
//
