LOCUS       NM_001001181            1117 bp    mRNA    linear   ROD 02-MAY-2024
DEFINITION  Mus musculus cDNA sequence BC031181 (BC031181), transcript variant
            1, mRNA.
ACCESSION   NM_001001181
VERSION     NM_001001181.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1117)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY129096.1, BC016084.1 and BY512913.1.
            
            On Nov 23, 2017 this sequence version replaced NM_001001181.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC016084.1, SRR1660819.238061.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-61                BY129096.1         29-89
            62-1108             BC016084.1         1-1047
            1109-1117           BY512913.1         409-417
FEATURES             Location/Qualifiers
     source          1..1117
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="18"
                     /map="18 50.96 cM"
     gene            1..1117
                     /gene="BC031181"
                     /note="cDNA sequence BC031181"
                     /db_xref="GeneID:407819"
                     /db_xref="MGI:MGI:3039614"
     exon            1..276
                     /gene="BC031181"
                     /inference="alignment:Splign:2.1.0"
     exon            277..452
                     /gene="BC031181"
                     /inference="alignment:Splign:2.1.0"
     CDS             300..518
                     /gene="BC031181"
                     /note="isoform 1 is encoded by transcript variant 1;
                     UPF0729 protein C18orf32 homolog"
                     /codon_start=1
                     /product="UPF0729 protein C18orf32 homolog isoform 1"
                     /protein_id="NP_001001181.1"
                     /db_xref="CCDS:CCDS37859.1"
                     /db_xref="GeneID:407819"
                     /db_xref="MGI:MGI:3039614"
                     /translation="MVCIPCIVIPVLLWIFKKFLEPYIYPVVSRIWPKKAVQQSGDKN
                     MSKVDCKGAGTNGLPTKGPTEVSDKKKD"
     exon            453..1110
                     /gene="BC031181"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1087..1092
                     /regulatory_class="polyA_signal_sequence"
                     /gene="BC031181"
                     /note="hexamer: ATTAAA"
     polyA_site      1109
                     /gene="BC031181"
                     /note="major polyA site"
ORIGIN      
        1 attggctgtt ggcagcccgg cctcccggaa gtgcggacat tgcccagggc gtcttggtgg
       61 tggtgagtga ggtttaggga gctggggctc gcgcagcggg tgtctgccag cggagctgtt
      121 cggcggcttg acgtccccag acgctgtgcg ttgagccggt gcaccccagg aattaggtag
      181 cctgcttgcc ttgcatttct gcaccgctct ccgtccgtgg acctcggtgt cccctccttg
      241 tttctctcgc ggctttcctc cctttggacc ggcacgtgtc ggagctccaa cctgggacaa
      301 tggtgtgcat tccttgcatt gtcattccag tcctgctctg gatcttcaaa aagttcctgg
      361 agccatacat ataccctgtg gtcagtcgca tatggcctaa aaaagccgtc cagcaatccg
      421 gcgataagaa tatgagcaag gtagactgca agggtgcagg tactaatgga ttacccacaa
      481 aaggaccaac agaagtctcg gataaaaaga aagactagtg tgggtctcct gaaggccctt
      541 ggctgtttgc aaatggacct aatgatatga agccttcttt gtctctgacc ttttttctct
      601 gagaccagga atctagataa tagtttagct tctgcctgat actgatccgg gagcacatga
      661 tatttatatt taaaattcca gtagttatat ttaatgatct cacccctgag tttctttttc
      721 attaaagtag ctttcatttc tattattcca atttactgat atgaacaaat agaaggtccg
      781 tgtgagcaga cgctcagaac agagcccttg gcccttcgag ttctttctta cgagtttgcc
      841 gttctcactt ctgtgggctc ctataccttg agtgggatga gtcttagtgg gaaacagtgc
      901 cgtccgaggt gggatgcgat gagaagatgt gatcactgca ggcgcagcgg cgagtggaca
      961 gctggccgag accagctcca aggcagctgg agaaggaagg acgggagctt ccttgaaaaa
     1021 tgtaacctgg acatcgttgt caatcccaca acccctgact ctctgtgctt ctagtcctga
     1081 cggtgtatta aacgtccatt taacttgtgg aaaaaaa
//
