LOCUS       NM_173411               1605 bp    mRNA    linear   ROD 06-FEB-2025
DEFINITION  Mus musculus cDNA sequence BC030500 (BC030500), mRNA.
ACCESSION   NM_173411
VERSION     NM_173411.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1605)
  AUTHORS   Diez-Roux,G., Banfi,S., Sultan,M., Geffers,L., Anand,S., Rozado,D.,
            Magen,A., Canidio,E., Pagani,M., Peluso,I., Lin-Marq,N., Koch,M.,
            Bilio,M., Cantiello,I., Verde,R., De Masi,C., Bianchi,S.A.,
            Cicchini,J., Perroud,E., Mehmeti,S., Dagand,E., Schrinner,S.,
            Nurnberger,A., Schmidt,K., Metz,K., Zwingmann,C., Brieske,N.,
            Springer,C., Hernandez,A.M., Herzog,S., Grabbe,F., Sieverding,C.,
            Fischer,B., Schrader,K., Brockmeyer,M., Dettmer,S., Helbig,C.,
            Alunni,V., Battaini,M.A., Mura,C., Henrichsen,C.N.,
            Garcia-Lopez,R., Echevarria,D., Puelles,E., Garcia-Calero,E.,
            Kruse,S., Uhr,M., Kauck,C., Feng,G., Milyaev,N., Ong,C.K.,
            Kumar,L., Lam,M., Semple,C.A., Gyenesei,A., Mundlos,S., Radelof,U.,
            Lehrach,H., Sarmientos,P., Reymond,A., Davidson,D.R., Dolle,P.,
            Antonarakis,S.E., Yaspo,M.L., Martinez,S., Baldock,R.A., Eichele,G.
            and Ballabio,A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC135357.3.
            
            On Dec 12, 2009 this sequence version replaced NM_173411.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC030500.1, BI872523.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164131, SAMN01164132
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on computational evidence
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-48                AC135357.3         140022-140069       c
            49-166              AC135357.3         139290-139407       c
            167-1605            AC135357.3         137526-138964       c
FEATURES             Location/Qualifiers
     source          1..1605
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="8"
                     /map="8 30.82 cM"
     gene            1..1605
                     /gene="BC030500"
                     /note="cDNA sequence BC030500"
                     /db_xref="GeneID:234290"
                     /db_xref="MGI:MGI:2447770"
     exon            1..48
                     /gene="BC030500"
                     /inference="alignment:Splign:2.1.0"
     exon            49..166
                     /gene="BC030500"
                     /inference="alignment:Splign:2.1.0"
     CDS             141..512
                     /gene="BC030500"
                     /codon_start=1
                     /product="uncharacterized protein LOC234290"
                     /protein_id="NP_775587.1"
                     /db_xref="CCDS:CCDS40345.1"
                     /db_xref="GeneID:234290"
                     /db_xref="MGI:MGI:2447770"
                     /translation="MSSVTGLYRETGSSLSSPERRQARNSGVQVALSGRAMEEFLHGP
                     DGIAARKARQRQRAEATQSGLVPERRVSPEPTAQARYVAWKEKEDSHAAWTALLAAAS
                     RQHCGEQRQLSGSRPAPGAQV"
     exon            167..1605
                     /gene="BC030500"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1151..1156
                     /regulatory_class="polyA_signal_sequence"
                     /gene="BC030500"
                     /note="hexamer: AATAAA"
     polyA_site      1170
                     /gene="BC030500"
                     /note="major polyA site"
     regulatory      1583..1588
                     /regulatory_class="polyA_signal_sequence"
                     /gene="BC030500"
                     /note="hexamer: AATAAA"
     polyA_site      1605
                     /gene="BC030500"
                     /note="major polyA site"
ORIGIN      
        1 cattaatata aagcagtgga gtaaatacga tcgtttcata gaataatgca actgaacgaa
       61 cccagcgaag catcaccagc acccccaggg cagtatttct gatctccact tcacggcaag
      121 ggacggatgg caggcggcga atgtcaagtg tgaccgggct ttacagggag actggttcgt
      181 ctctgagctc acccgaaagg cgccaggcca gaaattccgg agtacaagtc gccctgagcg
      241 ggagggcaat ggaagaattc ctccatggtc ctgatgggat cgcagcgagg aaggcgcggc
      301 agcgacagcg agcagaggca acccagtctg gactggtccc tgagaggagg gtttccccag
      361 aacctacagc tcaagccagg tacgtagcgt ggaaggagaa agaggattcc cacgccgcgt
      421 ggacagcgtt gttagccgca gcttccagac aacactgtgg agaacagagg cagctcagcg
      481 ggagtcggcc agcacctggg gcccaggttt agatttggct tcactaactg atgcttctcc
      541 gccctaccat gcctgcacct cccactgctg atagctgaga ggtcttctgg ttcctcgctt
      601 agctcacaca cccctccctg gttatccaga aaccttagaa ctgagataag tctccagcag
      661 atgggaccct tccctccccg tagaaaacgg agtcaacaca cacaggagaa cctgtggcct
      721 ctctaaggaa cctttgtgcc tgcctggctc aggatccaga gcgcctaact cctggtgtga
      781 acttaagtaa ggtgatggat ggccatgcca tgctgcgcag catcaggcta tccagagcct
      841 cccaaaacac tgtggtcgcc tccttgttac agtctagaga gtgatgccca tatgcttgag
      901 atatagagac ctcactccag atggttttct ccttcatcca ctttttcccc tttccccctc
      961 tctctaattt ccctccccca tcccccgcct tttttttttt ttttctcttc ccctagtctt
     1021 ctctatccac agggactcaa gcctctcaag acccagattt gaccctggag agttaacctt
     1081 taaactgttc aggttattca tttaaaacaa aagggactgg aacaatagag gttggctgta
     1141 ctgctacaca aataaagctt tatgttgtaa gcacttgttc tctgtggatg acttgccatc
     1201 tcagaaaagt ttcgaaacac actaaataca tattttgaat gtgtgctttc tgtacgtaaa
     1261 aatagtttgc tttacatttt acacaagtgt aatttgaagg tgcagaggga agagggtttt
     1321 aatcactgct tccaaaccac acacatatac actcttattg gttctgcgta attttcaaat
     1381 cctgctctga gttaaaggag ttctataaca gaatttgaag gcctggaagc catgtactaa
     1441 gggagagttg ttttggaata aattaactgt cacgaaaaac tgttaggaga actatttaac
     1501 tttattggat ttttttttca tttttggaca caagttactg ataaatgacc tgaagggaag
     1561 taaaagtgct ttgcaattaa ataataaaaa tatcatttta agcaa
//
