LOCUS       NM_153513                768 bp    mRNA    linear   ROD 09-JUN-2024
DEFINITION  Mus musculus cDNA sequence BC028528 (BC028528), transcript variant
            1, mRNA.
ACCESSION   NM_153513 XM_006501376
VERSION     NM_153513.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 768)
  AUTHORS   Xie,H., Wang,Y., Zhang,H., Fan,Q., Dai,D., Zhuang,L., Tao,R.,
            Chen,Q., Shen,W., Lu,L., Ding,X., Zhang,R. and Yan,X.
  TITLE     Tubular epithelial C1orf54 mediates protection and recovery from
            acute kidney injury
  JOURNAL   J Cell Mol Med 22 (10), 4985-4996 (2018)
   PUBMED   29999589
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC092855.39.
            
            On Apr 10, 2020 this sequence version replaced NM_153513.3.
            
            Transcript Variant: This variant (1) represents the longest
            transcript and encodes the longer isoform (1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: CB595713.1, CB596398.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849387, SAMN01164143
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on manual assertion
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-71                AC092855.39        68808-68878         c
            72-158              AC092855.39        66646-66732         c
            159-217             AC092855.39        65780-65838         c
            218-373             AC092855.39        65064-65219         c
            374-475             AC092855.39        61893-61994         c
            476-768             AC092855.39        60868-61160         c
FEATURES             Location/Qualifiers
     source          1..768
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="3"
                     /map="3 41.44 cM"
     gene            1..768
                     /gene="BC028528"
                     /gene_synonym="L259"
                     /note="cDNA sequence BC028528"
                     /db_xref="GeneID:229600"
                     /db_xref="MGI:MGI:2385885"
     exon            1..71
                     /gene="BC028528"
                     /gene_synonym="L259"
                     /inference="alignment:Splign:2.1.0"
     CDS             26..472
                     /gene="BC028528"
                     /gene_synonym="L259"
                     /note="isoform 1 precursor is encoded by transcript
                     variant 1; uncharacterized protein C1orf54 homolog"
                     /codon_start=1
                     /product="uncharacterized protein C1orf54 homolog isoform
                     1 precursor"
                     /protein_id="NP_705733.2"
                     /db_xref="CCDS:CCDS50998.1"
                     /db_xref="GeneID:229600"
                     /db_xref="MGI:MGI:2385885"
                     /translation="MDVLFIALLVAPLILGQEYDHEEQLEEGDYYQVAYYYYTVTPNY
                     DDFSVNFTVDYSVFESEDRLNRLNKEVTTTEAVETTASSYSLHTELMDPQNPVTTKPV
                     TTEPVTTEPVTTEPQSPNQNDAMSTLQSPVSCFLLWTLLQGGVHFM"
     exon            72..158
                     /gene="BC028528"
                     /gene_synonym="L259"
                     /inference="alignment:Splign:2.1.0"
     exon            159..217
                     /gene="BC028528"
                     /gene_synonym="L259"
                     /inference="alignment:Splign:2.1.0"
     exon            218..373
                     /gene="BC028528"
                     /gene_synonym="L259"
                     /inference="alignment:Splign:2.1.0"
     exon            374..475
                     /gene="BC028528"
                     /gene_synonym="L259"
                     /inference="alignment:Splign:2.1.0"
     exon            476..768
                     /gene="BC028528"
                     /gene_synonym="L259"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      736
                     /gene="BC028528"
                     /gene_synonym="L259"
                     /note="major polyA site"
     regulatory      747..752
                     /regulatory_class="polyA_signal_sequence"
                     /gene="BC028528"
                     /gene_synonym="L259"
                     /note="hexamer: ATTAAA"
     polyA_site      768
                     /gene="BC028528"
                     /gene_synonym="L259"
                     /note="major polyA site"
ORIGIN      
        1 acacagtgat agtgcaaaac ccagaatgga tgtcctcttt atagccctcc ttgttgcacc
       61 actcatcctg ggacaggaat acgaccatga agagcagctg gaagagggtg attactatca
      121 agtggcatat tattattaca cagtgacccc taattatgat gacttcagtg taaacttcac
      181 tgttgattac tccgtgtttg agtcagagga taggttgaac aggttgaata aggaggtaac
      241 aacaacagaa gcggtagaga ctacagcctc ttcatacagt cttcatacag aacttatgga
      301 ccctcagaat cctgtaacca cgaaaccagt gaccacagaa ccagtgacca cagaaccagt
      361 gaccacagaa ccacagagtc caaatcagaa tgatgccatg tccacgctgc agagtcctgt
      421 gtcctgcttt ctgttatgga ccctccttca aggaggggta cattttatgt agaaggtgag
      481 agaaggccgc tatcactctt cagactagaa ttctttggca agaatttgga tgaaaaattt
      541 taaaaaaaaa ttgggactgg agagatggtt cagcggttaa gagcactgac tgctcttcaa
      601 gaggtcctga gttcaattcc cagcaaccac atggtggctc acaaccatct gtaatgggat
      661 ctcatgccct cttctggagt gtctgaagac agctacagtg tacacatata tatatatata
      721 caataaataa ttcttttaag aaaaaaatta aaaaattaat tttgccta
//
