LOCUS       NM_001374033            4676 bp    mRNA    linear   ROD 06-AUG-2023
DEFINITION  Mus musculus cDNA sequence BC024063 (BC024063), transcript variant
            1, mRNA.
ACCESSION   NM_001374033 XM_011243614
VERSION     NM_001374033.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4676)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 4676)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC158605.5.
            
            On Oct 28, 2019 this sequence version replaced XM_011243614.3.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR9219380.2919.1,
                                           SRR7652917.122569.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849382
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-93                AC158605.5         33724-33816
            94-220              AC158605.5         58214-58340
            221-281             AC158605.5         58543-58603
            282-4676            AC158605.5         59143-63537
FEATURES             Location/Qualifiers
     source          1..4676
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="10"
                     /map="10 39.72 cM"
     gene            1..4676
                     /gene="BC024063"
                     /note="cDNA sequence BC024063"
                     /db_xref="GeneID:666584"
                     /db_xref="MGI:MGI:2670978"
     exon            1..93
                     /gene="BC024063"
                     /inference="alignment:Splign:2.1.0"
     CDS             91..2340
                     /gene="BC024063"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /codon_start=1
                     /product="uncharacterized protein LOC666584 isoform 1"
                     /protein_id="NP_001360962.1"
                     /db_xref="GeneID:666584"
                     /db_xref="MGI:MGI:2670978"
                     /translation="MDTVTYEDVHVNFTKEEWTLLHPSQKSLYRDVMLETCRNLTAIG
                     YKWEDHNIEESCQSSGRYKRNNICHSGPQPCEYQGYGKKQCTVASNSVLQTYGRVHTD
                     EKSCKRNQCSKPIANSNSLRQHERSHSRRKLYECNYCGKAFPSRSSLQVHERTHTGEK
                     PYGCNECGKAFSTRSHLQIHQRTHTGEKPYGCSECGKAFASKGNLQTHQRTHTGEKPY
                     CCHECGKAFATHNNLQIHEIIHTGEKPYECNECGRAFAYSRALEAHEKTHTGEKPYEC
                     NQCSKAFASHASLRNHLKHHTGEKFFVCTQCGKAFTSQSILHRHERTHTGEKPYECSQ
                     CGKAFALQSYLQIHKRTHTGEKPYECNHCGKAFTSHANLQNHEKHHTGEKPYGCNQCG
                     KAFVCSSSLQIHERSHTGNKPYECNQCGKAFTSRSYIQIHERIHTGEKPYGCKQCGKA
                     FAYSSSLQIHERSHTGEKLFECTHCSKAFASRSYLRIHKRVHTGEKPYECNHCGEAFA
                     SRGSLQNHEKHHTGEKPYGCNQCGKVFARRSNLQIHERIHTGEKPYGCKQCGKAFVLK
                     RDLQIHERIHTGEKPYGCKQCGKAFVCSSSLKIHERSHTGEKPCECNQCGKAFASRSY
                     LQIHKRVHTGEKPYECNLCGKAFVSHSYLQVHKRTHTGQKPNECNQCGKAFVSHSYLQ
                     IHKRLHTGEKPYGCNQCGKAFTYNRDLHRHEIIHTGEKPYECNQRDKAFASQSYLQIH
                     NRVHTRVEP"
     exon            94..220
                     /gene="BC024063"
                     /inference="alignment:Splign:2.1.0"
     exon            221..281
                     /gene="BC024063"
                     /inference="alignment:Splign:2.1.0"
     exon            282..4676
                     /gene="BC024063"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 attacccgct ttgttgtgaa tctgaggaaa gcactattga ccatctgccg gtagttgagc
       61 ggagagtgag gcgaacttgg aatccgcgcc atggatacag tgacctatga ggatgtgcat
      121 gtgaacttca ccaaagaaga gtggactttg ctgcatcctt ctcagaagag tctctacaga
      181 gatgtgatgc tggaaacgtg caggaacctc actgctatag gctacaaatg ggaagaccac
      241 aatattgaag aaagttgtca aagttctgga agatataaaa ggaataatat ctgtcactct
      301 ggaccccagc cttgtgagta tcagggatat ggaaagaagc aatgtactgt tgcaagtaac
      361 agtgttcttc aaacttacgg aagagtccat actgacgaga aatcctgtaa acgtaatcag
      421 tgcagtaaac ccattgcaaa ttctaatagt cttcgacaac atgaaagaag tcatagtaga
      481 agaaaactct atgaatgtaa ttactgtggt aaagcttttc caagtcgaag ttctcttcaa
      541 gtacatgaaa gaactcatac aggagagaaa ccctatgggt gcaatgaatg tgggaaagcc
      601 ttttcaactc gcagtcatct tcaaattcac caaagaactc acactggaga gaaaccctat
      661 gggtgcagtg agtgtgggaa agcctttgca agtaaaggta atcttcaaac gcaccaaaga
      721 actcacacag gagagaaacc atattgctgc catgaatgtg ggaaagcctt tgctactcac
      781 aataatcttc aaatacatga aatcattcat actggagaaa aaccctatga atgtaatgaa
      841 tgtggtagag catttgcata cagcagagct ctagaagcac atgagaaaac tcacactgga
      901 gagaaaccct atgaatgtaa ccaatgcagc aaagcctttg caagccatgc tagtcttcga
      961 aatcatctaa aacatcatac tggagagaaa ttctttgtat gtacacaatg tggtaaagcc
     1021 tttacaagtc agagtattct tcacaggcat gaaagaactc acactggtga gaaaccttat
     1081 gaatgtagtc aatgtggtaa agcctttgca cttcaaagtt atcttcaaat acacaaaaga
     1141 actcacactg gagagaaacc atatgaatgt aatcattgtg gtaaagcctt tacaagtcat
     1201 gctaatcttc aaaatcatga aaaacatcat actggagaga aaccctatgg atgtaatcaa
     1261 tgtggtaaag cctttgtatg tagtagcagt cttcaaatac atgaaagaag tcatactgga
     1321 aataaacctt atgaatgtaa tcagtgtggt aaagccttta caagtcgcag ttatattcaa
     1381 atacatgaaa gaattcatac tggggagaaa ccctatggat gcaagcaatg tggtaaagcc
     1441 tttgcatata gcagtagtct tcaaatacat gagagaagtc acactggaga gaaacttttt
     1501 gaatgtactc attgtagtaa agcttttgca agtcgtagtt atcttcgaat acacaaaaga
     1561 gttcatactg gagagaaacc ctatgaatgt aatcattgtg gtgaagcctt tgctagtcga
     1621 ggtagtcttc agaatcatga aaaacatcat actggagaga aaccttatgg atgtaaccaa
     1681 tgtggtaagg tctttgcacg tcgcagtaat cttcaaatac atgaaagaat tcatactgga
     1741 gaaaaaccct atggatgtaa gcaatgtggt aaagcctttg tattaaagcg tgatcttcaa
     1801 atacatgaaa ggattcatac cggagaaaaa ccctatggat gtaagcaatg tggtaaagcc
     1861 tttgtatgta gtagcagtct taaaatacat gaaagaagtc acactggaga gaaaccttgt
     1921 gaatgtaatc agtgtggtaa agcctttgca agtcgaagtt atctccaaat acacaaaaga
     1981 gttcatactg gagagaaacc atatgaatgt aatctttgtg gtaaagcctt tgtaagtcat
     2041 agttatcttc aagtacacaa aaggactcat actggacaga aaccaaatga atgtaatcag
     2101 tgtggtaaag cttttgtaag tcacagttac cttcaaatac acaaaagact tcatactgga
     2161 gaaaaaccct atggatgtaa tcagtgtggt aaagccttta catataaccg agatcttcat
     2221 aggcatgaaa taattcacac tggagagaaa ccctatgaat gtaatcagcg tgataaagcc
     2281 tttgcaagtc aaagttatct tcaaatacac aaccgagttc atactagagt ggaaccataa
     2341 gaatgtactc actgtggtta aagcctttgc atatcacact actctttgta atcacaaaaa
     2401 aatttgtact ggataggatt atggatgtaa ttgatgtaat aaaagtttga tcatcagcat
     2461 aatcttgaaa cacatcccag agaaaagtca atgtcatagt gcctctgtat gtcatagtct
     2521 tctccaaaat catgaaagca ttcctactgg aaatcatcac tatgaatcta atagatgcac
     2581 taaagccttg cacagcaagc acatatttcc cactgagcca tcttcttgtg cttatagaag
     2641 attagcagaa ctatgtcatc cttcaaaaaa attgtcttgt ttttttatta tatacaaatt
     2701 gtcaaccaag aatagaacac cacagtaatt tgaaaaataa aaacctactt acaaatgata
     2761 attatatact gccatccatt tctatgggtt ggtttattct gaggaataaa tacttgttcg
     2821 taacactttc taagaaacac aaatgaacgg ccgagaatta tcactgtggg taaaggaggt
     2881 tgctgctaag cctggtgatc tgagtctatt ccgtgggaga caaacatgca ggtttttctc
     2941 tgatcactat acacgtgcta tgacatatgc atacccacac agcaacacat acataaatat
     3001 ttctgaaact taagcaccag tgagttcact caccagttga agattcttgc tgcaaaactt
     3061 gactatgtgg gtcaaactta ccctgaggaa atatgaatag acacgtgtaa gttggcttct
     3121 gactgacagg tgcacaccct agcacaggtg tatgcatcca ggtaaaaatt attgaacatg
     3181 aaattaagaa aacaaaatag ccacagtgtt gagaacataa atgatttacc gcttgtaatt
     3241 aatctattgt tgtattccag gaggtgcttt ttttgttcat caaagaatga tggtttgtgc
     3301 ataaatctta cataattctt tcattctctg attcaaagat aggccattgt aaaaacacct
     3361 cagttagatg gaaaggtact tgcctataat cacagcactt gtaagaaagt gagttccagg
     3421 atgacatggt tatgtataga gaccctgtct ccatctaccc cccaaaatcc aaaagccaac
     3481 catcctacca ctaccatcaa caacaacaaa aatcccaaga catcaagaac aaaatacccc
     3541 taaaacaaac aaccatatct ctgtttttgg atcttttctt agtataatct gaactcatct
     3601 ctactcaact aaattttctt cacgctcata gaacttctaa aaataacagt gaaaagcaat
     3661 agcagagtcc attcataata ggatagatat ccattcagtt cttcaatgat catttatcag
     3721 ggaccctata agtgatagaa gaccaaggga ataatggggc ttcttcattt tctgcattat
     3781 agttgcatat ttgtggtctg gaatgttgac atagtagtac ttctcttcct agcagttaca
     3841 acagatgggt cagaagtacc tctaattcct gatacagaag ttcagataca ttcttctggc
     3901 ttccttggac atctggtatg caaagattgt aaaggcacac acatacacaa aaggactcca
     3961 tattttaaat atgtatatgt aaatgtaaaa atcatgttat atttttagaa aataaaaata
     4021 atttacgtgt attactgaga aacagtcctg gagtggagtt acatgagaat tctgaatgct
     4081 tgtgaaaaca caactaaaaa aacatgagaa gattcttatg accttagatt cttcaaatca
     4141 cagtcttgtt cttggaatgt attttcatgc tctgaaatgt aggagctagg agtgagatta
     4201 ctctttgttg cttttagttg ctcatttaaa agtttatagt atgctttaaa tgcttctgta
     4261 ggaaaacatg tttgtcatgt gtgtttgtac tcttgtacac agctttattc atgagaactt
     4321 aggtgacatt tcttaatctt cagagtttaa attgcctctg gccgtgtaaa gttgactatt
     4381 gcatgagact tcagtccagc tctcctattg gctcagttct cccaggtccc ccagctctaa
     4441 gccagtgaga agaactaaac agggaccaaa tgtcaacaat gagtgaagtg agtgagaatg
     4501 atgggtagga aaggctttgc cttttttcac gcttatgcat catttttgag aaaggagaat
     4561 gtgtattaag atgacaactg ttagagttct tttttttctt aatttttaat aaatgcattt
     4621 tatacatcaa acaataatat tgaatatttt gagaatcaag aaacaaaaat tttgtt
//
