LOCUS       XM_036159868            2366 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus cDNA sequence, BC016579 (BC016579),
            transcript variant X4, mRNA.
ACCESSION   XM_036159868
VERSION     XM_036159868.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000082.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2366
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="16"
     gene            1..2366
                     /gene="BC016579"
                     /note="cDNA sequence, BC016579; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     ESTs, 2 long SRA reads, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 6 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:212998"
                     /db_xref="MGI:MGI:2384848"
     CDS             1812..2315
                     /gene="BC016579"
                     /codon_start=1
                     /product="TPA-induced transmembrane protein homolog
                     isoform X4"
                     /protein_id="XP_036015761.1"
                     /db_xref="GeneID:212998"
                     /db_xref="MGI:MGI:2384848"
                     /translation="MEEGSRSQSPREELELSMLDGPQEELTPLNNDLRIQPNSAEDPS
                     PAQVGKESPWSPCNKSVVGKCKLWMVIVTIFLCFIIVIVISLCLVGVTYIDEDENEIL
                     ELSSNKTFFITLKIPEECANEEELHHLLTERLTDTYRQSPSLSRFFTSADILDFSLEF
                     HLKMMTL"
ORIGIN      
        1 aagaaactga cccaccccac acaaaactca gggtttccaa tcttcactaa gcgacagaaa
       61 gcagaatggt aagaggtgga ctgaggcata cctctgagct cttggtcaca caggtggcca
      121 gcagtgaaag gccagatgca ttttgggtga gtgttctgaa agtcaaactt ttcaggtatg
      181 ctatctcctg gcttctggtt gtttttgtaa aatttaaagg gccaagattt caatttgttc
      241 tcaaagcctc gtaatgcatg gtttgaatag ctgtaagtct atagtacttg ctcagcccat
      301 cccagttctt gatttatctt aatttagaga gtgtctcact ccatattaga accgtatttt
      361 tcctgtcaga gggcagagtt aaccgtagca ccaaacaagt aaaatgggat gaaaaagaat
      421 ttcaaaggag aaatagtaac actatattaa acaggactca gagcactgca cagaactgta
      481 gagaaagtag aattgaaagg acagagaaca ggaaatgtta ttttccaaat tagtaaaagt
      541 gattggcaaa ttatgactac cctgtgataa tgagtatttc cagttcatag tacttagttc
      601 aattttctaa aaacactttc tttgggatta aggataaaca tcacaataac agcatctctc
      661 tggtgactgg tgataaaacc caggggtagg gccatatacc tgggctgagc ccctagcact
      721 gcaaagaaaa gagatatttc caaatatttc tggaatcctc aaactggtct taataactat
      781 ctatgtgaga ggaaggaaat ggggagagga tggtggttct gaaaagaagg tttagctaga
      841 ggcaagatct ttggaccaat acccaataca cactttgctt tgcaaacgta attcccggct
      901 cactaagcca gttctgagct gtgcatgggg tgtggaaggc attgtatgct tcctgacaca
      961 tgggcctttt cttcaggtgc ggtgttcatg acccctcctc tcaaagataa acaataatca
     1021 gtaaatcagt aatgtttatg aatttttgct tctgcgagtc actgtcttct gtgctgagaa
     1081 acacaagcgt atgaagaact cacacagtgc cgattgccct tactagtcta agggatactg
     1141 atactgcccc tgtgcctgaa tcaggagggg cgtggctgct cctttcaatg gagagcaaag
     1201 ccatagaggt agaggtagtg tatgaaaatt acttcggggc tgtgtattat tcatcttcgt
     1261 gtgttcggaa tcaagcatgc tgcctggcac acggaagatg attcatagct gtttgttgat
     1321 ttggtagatg agccctcgct agacagtgag tactggagta agtttcagca tcacactggt
     1381 ccaggtagaa ggctggaaag tttccggaac cgcaccctcc cccgtccccc aacaccctcc
     1441 ccacccaacc ctgcctatcc cttccttgcc acagtccagc ttgcaatcag gccctgtgag
     1501 cttctgcggt ctgcatccac acggaaaggc attgcagcta gcaccctgaa caaacctgaa
     1561 aaacagccgg tcccacttgc atctaccttt cctgagcaag gtcagctaac caaagccgga
     1621 gtgcttccac tctctctggc ttcgcccctc ccctccaggt ccgccaccgc aggcctatct
     1681 ggcgccgccc gaggtctacc tgccgcgcct ggtgggtgga gtgtgagctg agtagtctcc
     1741 ctgtgctgga ctctgcaccc ttaggtgcta gagtcttgcc tctcagcgga gcctccgtct
     1801 tcggcgctgc catggaagaa gggtccagat cccaatcgcc ccgggaagag ctggagctct
     1861 cgatgctgga cgggcctcag gaagagctga cacctctcaa caatgacctt cggatccagc
     1921 ctaactccgc tgaggaccct agcccagccc aggtgggcaa ggaaagcccc tggagtccct
     1981 gcaacaagag cgtggttgga aaatgtaaac tgtggatggt cattgtcacc atattcttgt
     2041 gcttcattat agtgatcgtt ataagcctat gccttgtagg agtgacgtat atcgatgaag
     2101 atgaaaatga aatactcgaa ttatcgtcaa acaaaacatt cttcatcacg ctcaagattc
     2161 cagaggagtg tgctaatgaa gaggagttgc atcacttgct cactgaaagg ctcacggaca
     2221 cgtatagaca gtccccatct ctgagtcgtt ttttcacttc tgctgatatc ttggatttca
     2281 gtttggagtt ccatctgaag atgatgactt tatgaaatac atgatgagtg aagagttggt
     2341 gctcggcatc atgcgacaga gcttcc
//
