LOCUS       NM_020579               1998 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase,
            polypeptide 3 (B4galt3), mRNA.
ACCESSION   NM_020579
VERSION     NM_020579.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1998)
  AUTHORS   Wei,H., Naruse,C., Takakura,D., Sugihara,K., Pan,X., Ikeda,A.,
            Kawasaki,N. and Asano,M.
  TITLE     Beta-1,4-galactosyltransferase-3 deficiency suppresses the growth
            of immunogenic tumors in mice
  JOURNAL   Front Immunol 14, 1272537 (2023)
   PUBMED   37901252
  REMARK    GeneRIF: Beta-1,4-galactosyltransferase-3 deficiency suppresses the
            growth of immunogenic tumors in mice.
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1998)
  AUTHORS   Nishimura,M., Yokoi,N., Miki,T., Horikawa,Y., Yoshioka,H.,
            Takeda,J., Ohara,O. and Seino,S.
  TITLE     Construction of a multi-functional cDNA library specific for mouse
            pancreatic islets and its application to microarray
  JOURNAL   DNA Res 11 (5), 315-323 (2004)
   PUBMED   15747579
REFERENCE   3  (bases 1 to 1998)
  AUTHORS   Nakamura,N., Yamakawa,N., Sato,T., Tojo,H., Tachi,C. and
            Furukawa,K.
  TITLE     Differential gene expression of beta-1,4-galactosyltransferases I,
            II and V during mouse brain development
  JOURNAL   J Neurochem 76 (1), 29-38 (2001)
   PUBMED   11145975
REFERENCE   4  (bases 1 to 1998)
  AUTHORS   Eddleston,J., Murdoch,J.N., Copp,A.J. and Stanier,P.
  TITLE     Physical and transcriptional map of a 3-Mb region of mouse
            chromosome 1 containing the gene for the neural tube defect mutant
            loop-tail (Lp)
  JOURNAL   Genomics 56 (2), 149-159 (1999)
   PUBMED   10051400
REFERENCE   5  (bases 1 to 1998)
  AUTHORS   Lo,N.W., Shaper,J.H., Pevsner,J. and Shaper,N.L.
  TITLE     The expanding beta 4-galactosyltransferase gene family: messages
            from the databanks
  JOURNAL   Glycobiology 8 (5), 517-526 (1998)
   PUBMED   9597550
REFERENCE   6  (bases 1 to 1998)
  AUTHORS   Tchernev,V.T., Barbosa,M.D., Detter,J.C., Patel,T.D., Achey,K.,
            Wakeland,E.K., Gueorguieva,R.V., Yang,M.C., Gossler,A. and
            Kingsmore,S.F.
  TITLE     Genetic mapping of 20 novel expressed sequence tags from
            midgestation mouse embryos suggests chromosomal clustering
  JOURNAL   Genomics 40 (1), 170-174 (1997)
   PUBMED   9070936
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BU703242.1, AF142671.1, CD363941.1 and BP772898.1.
            
            [WARNING] On Aug 27, 2024 this sequence was replaced by
            NM_020579.3.
            
            On Mar 11, 2009 this sequence version replaced NM_020579.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AF142671.1, BC013619.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-60                BU703242.1         1-60
            61-1157             AF142671.1         1-1097
            1158-1747           CD363941.1         70-659
            1748-1998           BP772898.1         47-297              c
FEATURES             Location/Qualifiers
     source          1..1998
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="1"
                     /map="1 79.29 cM"
     gene            1..1998
                     /gene="B4galt3"
                     /gene_synonym="9530061M23Rik; ESTM26; ESTM6"
                     /note="UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase,
                     polypeptide 3"
                     /db_xref="GeneID:57370"
                     /db_xref="MGI:MGI:1928767"
     exon            1..87
                     /gene="B4galt3"
                     /gene_synonym="9530061M23Rik; ESTM26; ESTM6"
                     /inference="alignment:Splign:2.1.0"
     exon            88..258
                     /gene="B4galt3"
                     /gene_synonym="9530061M23Rik; ESTM26; ESTM6"
                     /inference="alignment:Splign:2.1.0"
     exon            259..553
                     /gene="B4galt3"
                     /gene_synonym="9530061M23Rik; ESTM26; ESTM6"
                     /inference="alignment:Splign:2.1.0"
     exon            554..789
                     /gene="B4galt3"
                     /gene_synonym="9530061M23Rik; ESTM26; ESTM6"
                     /inference="alignment:Splign:2.1.0"
     exon            790..980
                     /gene="B4galt3"
                     /gene_synonym="9530061M23Rik; ESTM26; ESTM6"
                     /inference="alignment:Splign:2.1.0"
     exon            981..1103
                     /gene="B4galt3"
                     /gene_synonym="9530061M23Rik; ESTM26; ESTM6"
                     /inference="alignment:Splign:2.1.0"
     exon            1104..1208
                     /gene="B4galt3"
                     /gene_synonym="9530061M23Rik; ESTM26; ESTM6"
                     /inference="alignment:Splign:2.1.0"
     exon            1209..1998
                     /gene="B4galt3"
                     /gene_synonym="9530061M23Rik; ESTM26; ESTM6"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1979..1984
                     /regulatory_class="polyA_signal_sequence"
                     /gene="B4galt3"
                     /gene_synonym="9530061M23Rik; ESTM26; ESTM6"
                     /note="hexamer: AATAAA"
     polyA_site      1997
                     /gene="B4galt3"
                     /gene_synonym="9530061M23Rik; ESTM26; ESTM6"
                     /note="major polyA site"
ORIGIN      
        1 ggccccgccc cagcgcccgc ttccaagatg gctgcagcga tacctgcccg gttgtccggg
       61 tggcggtgac gacggggagc agaccaggtg actggttatc cttgctcatt tctggttccc
      121 gctggtccca gattggctgt tggaatgctt tttttctggc ccctgtgaca gttccaattt
      181 gagataatgc ctcatatctc tgctccccgg ggacctcctg gagcccccac gatccggaac
      241 aaggcagcgt gaacacagaa atcccttcac tccttaccta gctctcaagt caggatgttg
      301 cggaggctgc tggagagacc ctgtacattg gccctgcttg tgggctccca actggcagtg
      361 atgatgtatc tgtcactagg gggcttccga agtcttagtg ccctgtttgg tcgagatccg
      421 ggcccaacat tcgactattc tcatccccac gatgtctata gtaacctcag tcacctgccc
      481 gcagcccctg gagctgcagg ggctcctccg gctcaagcat tgccctactg tccagaaaga
      541 tcacccttct tagtgggtcc tgtgtcagta tcctttagcc cagtgccgtc actagcggag
      601 attgtggagc ggaatccccg ggtggaatca gggggccggt accgtcctgc agggtgtgag
      661 cctcgctccc gaacagccat aattgtgccc catcgtgccc gggagcacca ccttcggctg
      721 ctgctctatc acctgcaccc tttcctgcag cgccagcagc ttgcgtacgg catttatgtc
      781 atccaccagg ctggaaatgg aacgtttaac agggcaaagc tgctgaacgt aggggtgagg
      841 gaagcccttc gtgatgaaga atgggactgc ttgttcttac acgacgtgga cctccttcca
      901 gaaaacgacc ataacctgta tgtgtgcgac ccccggggac cccgccacgt tgctgttgcc
      961 atgaacaagt ttggatacag cctcccgtac ccccagtact ttggcggagt ttcagcgctc
     1021 actcccgacc agtacctgaa gatgaacggc ttccccaacg agtactgggg ctggggtggc
     1081 gaggatgacg acattgctac cagggtccgc ctggctggga tgaagatctc tcgaccacct
     1141 acctctgtgg gacactataa gatggtgaag cacagagggg ataaaggaaa tgaggaaaat
     1201 ccccacagat ttgacctcct ggtccgtacc cagaattctt ggacacaaga tggaatgaac
     1261 tcactaacgt accgactgct ggcaagagag ctgggtcctc tctataccaa catcaccgca
     1321 gacatcggga ctgaccctcg gggtccccgg tctccctctg gtccccgata cccacctggt
     1381 tcctcccagg ccttccgtca agagatgctg caacgccggc ccccagctag gcctggccct
     1441 ctgcccactg ccaaccacac agctccccgt ggctcacact gattctctgc ccactgtaat
     1501 catgagactg aattggaggg gttgtgtccc tcacacctct gctcctcact gctctcagag
     1561 ggatgtgagg gaattaaccc tagtgctgtg ctagggggca gggacctctt ctcactgcta
     1621 gattggagct gggctcctct agacctggag gttcctcttt ctaggggtca cctgtcaggg
     1681 cttatgactg tgaatctttg atgtcatttt atgtgacgaa tcctgggagt cctctgcccc
     1741 tggggtagga gcagggctgg accccaagtc ccttcctcgt ccatggacat tactcttttc
     1801 caagagtgac ctggcttctc ctgggacctc tgtgaatatt tattctattt atggttccta
     1861 agaagctgtc tggtggagga aacccctagc cgggcatttc ctgcgagtgc tggaatggct
     1921 gctcctcctc tggtcttggc cccggagggg cgggggctgg gattttgata tcttttctaa
     1981 taaaggactt tgtctcac
//
