LOCUS       NM_178664               2866 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus UDP-GlcNAc:betaGal
            beta-1,3-N-acetylglucosaminyltransferase-like 1 (B3gntl1), mRNA.
ACCESSION   NM_178664
VERSION     NM_178664.5
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2866)
  AUTHORS   Diez-Roux,G., Banfi,S., Sultan,M., Geffers,L., Anand,S., Rozado,D.,
            Magen,A., Canidio,E., Pagani,M., Peluso,I., Lin-Marq,N., Koch,M.,
            Bilio,M., Cantiello,I., Verde,R., De Masi,C., Bianchi,S.A.,
            Cicchini,J., Perroud,E., Mehmeti,S., Dagand,E., Schrinner,S.,
            Nurnberger,A., Schmidt,K., Metz,K., Zwingmann,C., Brieske,N.,
            Springer,C., Hernandez,A.M., Herzog,S., Grabbe,F., Sieverding,C.,
            Fischer,B., Schrader,K., Brockmeyer,M., Dettmer,S., Helbig,C.,
            Alunni,V., Battaini,M.A., Mura,C., Henrichsen,C.N.,
            Garcia-Lopez,R., Echevarria,D., Puelles,E., Garcia-Calero,E.,
            Kruse,S., Uhr,M., Kauck,C., Feng,G., Milyaev,N., Ong,C.K.,
            Kumar,L., Lam,M., Semple,C.A., Gyenesei,A., Mundlos,S., Radelof,U.,
            Lehrach,H., Sarmientos,P., Reymond,A., Davidson,D.R., Dolle,P.,
            Antonarakis,S.E., Yaspo,M.L., Martinez,S., Baldock,R.A., Eichele,G.
            and Ballabio,A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2866)
  AUTHORS   Visel,A., Thaller,C. and Eichele,G.
  TITLE     GenePaint.org: an atlas of gene expression patterns in the mouse
            embryo
  JOURNAL   Nucleic Acids Res 32 (Database issue), D552-D556 (2004)
   PUBMED   14681479
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BB641432.1, AK031361.1 and BC022739.1.
            
            On Jul 15, 2009 this sequence version replaced NM_178664.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK156318.1, AK031361.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-12                BB641432.1         1-12
            13-968              AK031361.1         2-957
            969-2866            BC022739.1         281-2178
FEATURES             Location/Qualifiers
     source          1..2866
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 86.14 cM"
     gene            1..2866
                     /gene="B3gntl1"
                     /gene_synonym="6030413G23Rik; QTGAL"
                     /note="UDP-GlcNAc:betaGal
                     beta-1,3-N-acetylglucosaminyltransferase-like 1"
                     /db_xref="GeneID:210004"
                     /db_xref="MGI:MGI:2441705"
     exon            1..167
                     /gene="B3gntl1"
                     /gene_synonym="6030413G23Rik; QTGAL"
                     /inference="alignment:Splign:2.1.0"
     CDS             120..1193
                     /gene="B3gntl1"
                     /gene_synonym="6030413G23Rik; QTGAL"
                     /EC_number="2.4.1.-"
                     /note="UDP-GlcNAc:betaGal
                     beta-1,3-N-acetylglucosaminyltransferase-like protein 1;
                     ortholog of human UDP-GlcNAc:betaGal
                     beta-1,3-N-acetylglucosaminyltransferase-like 1 B3GNTL1;
                     beta3GnTL1; BGnT-like protein 1; beta3Gn-T-like protein 1;
                     beta1,3-N-acetylglucosaminyltransferase-like protein 1"
                     /codon_start=1
                     /product="queuosine-tRNA galactosyltransferase"
                     /protein_id="NP_848779.2"
                     /db_xref="CCDS:CCDS25780.1"
                     /db_xref="GeneID:210004"
                     /db_xref="MGI:MGI:2441705"
                     /translation="MEVSENATTRGSLALVSIILPVHNAEQWLDECLMSVLQQDFEGA
                     MELSVFNDASKDKSRAIIEKWKVKLEDSGISVVIGGHDSPSPRGVGYSKNQAVAQSTG
                     SYLCFLDSDDVMMPQRVRMQYEAAGQHPTSIIGCQVRRDPPDSTERYTRWINHLTSDQ
                     LLTQVFTSHGPTVIMPTWFCSRAWFSHVGPFDEGGQGVPEDLLFFYEHLRKGGGVFRV
                     DHSLLLYRYHLYAATHSVLEMTIWTHRVHFLEEQVLPHWKSFTIWNAGKQGRKLYRSL
                     TAASRHKVVAFCDVDENKIRKGFYCYEDSQERPKPKVPILHFQAAQSPFVICVKLDLT
                     GGEFEDNLKSLDLQEGRDFVHFS"
     exon            168..284
                     /gene="B3gntl1"
                     /gene_synonym="6030413G23Rik; QTGAL"
                     /inference="alignment:Splign:2.1.0"
     exon            285..384
                     /gene="B3gntl1"
                     /gene_synonym="6030413G23Rik; QTGAL"
                     /inference="alignment:Splign:2.1.0"
     exon            385..449
                     /gene="B3gntl1"
                     /gene_synonym="6030413G23Rik; QTGAL"
                     /inference="alignment:Splign:2.1.0"
     exon            450..515
                     /gene="B3gntl1"
                     /gene_synonym="6030413G23Rik; QTGAL"
                     /inference="alignment:Splign:2.1.0"
     exon            516..611
                     /gene="B3gntl1"
                     /gene_synonym="6030413G23Rik; QTGAL"
                     /inference="alignment:Splign:2.1.0"
     exon            612..707
                     /gene="B3gntl1"
                     /gene_synonym="6030413G23Rik; QTGAL"
                     /inference="alignment:Splign:2.1.0"
     exon            708..832
                     /gene="B3gntl1"
                     /gene_synonym="6030413G23Rik; QTGAL"
                     /inference="alignment:Splign:2.1.0"
     exon            833..968
                     /gene="B3gntl1"
                     /gene_synonym="6030413G23Rik; QTGAL"
                     /inference="alignment:Splign:2.1.0"
     exon            969..1037
                     /gene="B3gntl1"
                     /gene_synonym="6030413G23Rik; QTGAL"
                     /inference="alignment:Splign:2.1.0"
     exon            1038..1112
                     /gene="B3gntl1"
                     /gene_synonym="6030413G23Rik; QTGAL"
                     /inference="alignment:Splign:2.1.0"
     exon            1113..1206
                     /gene="B3gntl1"
                     /gene_synonym="6030413G23Rik; QTGAL"
                     /inference="alignment:Splign:2.1.0"
     exon            1207..2851
                     /gene="B3gntl1"
                     /gene_synonym="6030413G23Rik; QTGAL"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2268..2273
                     /regulatory_class="polyA_signal_sequence"
                     /gene="B3gntl1"
                     /gene_synonym="6030413G23Rik; QTGAL"
                     /note="hexamer: AATAAA"
     polyA_site      2292
                     /gene="B3gntl1"
                     /gene_synonym="6030413G23Rik; QTGAL"
                     /note="major polyA site"
     regulatory      2832..2837
                     /regulatory_class="polyA_signal_sequence"
                     /gene="B3gntl1"
                     /gene_synonym="6030413G23Rik; QTGAL"
                     /note="hexamer: AATAAA"
     polyA_site      2851
                     /gene="B3gntl1"
                     /gene_synonym="6030413G23Rik; QTGAL"
ORIGIN      
        1 gtggctctgc accaatcgga agcggtccag tctgtgcatc gcctcctgga gcttgctgtg
       61 catgcgttgg cctcctaggc aggactgcga ttgcaggaaa agggcagtgg agccgcgcga
      121 tggaggtctc cgagaacgcc acaacgcgcg gctcgctggc cctagtgtct atcatcctcc
      181 ccgtgcacaa cgctgagcag tggttggatg agtgcttgat gtctgttttg cagcaagact
      241 ttgaaggtgc catggagctc tctgttttta acgatgccag caaggacaag tctagggcca
      301 tcattgaaaa atggaaggtg aaactggaag attctggaat ctctgtagtc atcggaggcc
      361 atgactctcc ttctcccaga ggagttggat attctaaaaa ccaagccgtc gcacagagca
      421 cagggtctta cctttgcttt ttggattcag acgatgtcat gatgccgcag agagtgagga
      481 tgcagtacga agctgccggt cagcacccga cgagtatcat aggatgccaa gtgagaagag
      541 atcccccgga ctctacagag cgatatacac gttggatcaa ccatttgaca tctgatcagc
      601 tgctgacaca ggtgttcacc tcccacggcc ccacggtgat catgcctacc tggttctgct
      661 ctcgggcctg gttctcccac gtgggcccat ttgatgaagg aggccagggt gttccagagg
      721 atctgctgtt cttctatgag cacctcagga agggcggtgg cgtcttccgg gtggaccaca
      781 gcctgctact ctaccgatac cacctgtatg cagccacaca ttcggtcctt gagatgacca
      841 tctggacgca ccgtgtccac ttcctagagg aacaagtcct acctcactgg aagtccttca
      901 ccatctggaa tgcaggcaag caggggcgta agttataccg cagcctgact gcagccagcc
      961 ggcacaaggt ggtggccttc tgtgacgttg atgagaacaa gatcaggaag ggcttctact
     1021 gctacgaaga ctcacaggaa agacccaagc caaaggtccc catcctgcat ttccaagctg
     1081 cccagtctcc ctttgtcatc tgtgtgaagc tggacctcac aggaggtgag tttgaagaca
     1141 acttgaagtc gctggacttg caggaaggcc gggacttcgt ccatttcagc tgaggctgct
     1201 gcctagacaa gacatctaag cctgtctcac acatggcctc gtcagctgat ctcagccagg
     1261 ctttcttctg ctcccaagag aaaatgctga gcttaggaaa gaggtgtttg agactggaat
     1321 gaagtgtgaa ccaggccgca ggcccctaga agtccctgcc accagggcag cacagcaaac
     1381 ctgcagaccc aggcctggaa agtggctccc agtaaaggca gcagcctgtg tgctttcaag
     1441 tctggctatt acactgaggg gacacatact accatgactt ggcttgaggc cctggccact
     1501 tcactgtgag ctgttacctt gaattctgcc catctgcaac agcttaatga gcctcaggca
     1561 tcagatacaa agaggcagag gaggcagaca tgggactccc acagcaggac aggtaggcat
     1621 gcaggccctg ggaccagagg tgccattcat atgcccacag ggatgctggc ttctgatgat
     1681 ctctcagact gttgtagcat tgttggtgtc ttggctggcc gagcacgtgg gagctgcctg
     1741 tcacttcatc tgcccagcac ttcagactac accagggtct gaaacgcccc tcatgctaca
     1801 ggaatcacac agcaaagcac tgaaggggag agagccacag cagatcctcc agctccttgt
     1861 gcacggacgt cccagagata ggcagaggct gggctgtgtg atacatgatt taatgagaag
     1921 cacgtctgtg acagcaaacg tatgggcagt cccggccacc agagcaaagc acgcatgagg
     1981 aattactgct ctccagggat ggcctcccaa tgaaggtgct accttcctca gatgtctgtg
     2041 gcaccaagtt tccatgatgg taaagcttgt tgtggagcct cagggcgaga catcccagct
     2101 aggtaggcaa ggctcagctt cctggaatag gctgtaaaga gacatggcaa catcaggctg
     2161 gttgctacct caccctctct tgatagatgg ctaaagcctg ccatgtccca gaatcctggc
     2221 agcttgaatt gtgtagtaat agctctgtgg ccttgtcaga gtacattaat aaactgtttg
     2281 catatgttta aacttttcta acaatgtaaa gggcagagtt caccttgcat aagggaccaa
     2341 gactccacca tggccccatc tcttgtcacc actcctagag caacacctgt gtatctctca
     2401 tatggctcct gcagggggaa gccctgggaa gacttgggca cacagagagg aaaaaacaaa
     2461 acctcttaca acatgacaca gacatgacag gagctcaggc acagagctga caagagcaag
     2521 ttaagaagct gaccagtgag accatgcctg ctaaattcca agacctcagg gttagaacaa
     2581 gccagtttca gacagggctc tgcagctgga ggtcatggcc agggataacg taatgtgtca
     2641 agaaagagtg ctggccccag ggtaatcagg gacagaagaa cagagctgtg aaacaagtta
     2701 acagggtagg aaatgaaatt cagataaggg ggaaagaaac attaaacagg aaggtcaaat
     2761 aggaaacaaa gatgatggat gtaaacttgt ctgtaattat gcagtaaaca tgaattcatg
     2821 aaacactaat taataaagat ttaaaatgat aaaaaaaaaa aaaaaa
//
