LOCUS       NM_001377044            1705 bp    mRNA    linear   ROD 17-JAN-2022
DEFINITION  Mus musculus beta-1,3-galactosyltransferase 9 (B3galt9), transcript
            variant 1, mRNA.
ACCESSION   NM_001377044
VERSION     NM_001377044.2
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1705)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 1705)
  AUTHORS   Hansen GM, Markesich DC, Burnett MB, Zhu Q, Dionne KM, Richter LJ,
            Finnell RH, Sands AT, Zambrowicz BP and Abuin A.
  TITLE     Large-scale gene trapping in C57BL/6N mouse embryonic stem cells
  JOURNAL   Genome Res 18 (10), 1670-1679 (2008)
   PUBMED   18799693
REFERENCE   3  (bases 1 to 1705)
  AUTHORS   Zambrowicz BP, Abuin A, Ramirez-Solis R, Richter LJ, Piggott J,
            BeltrandelRio H, Buxton EC, Edwards J, Finch RA, Friddle CJ, Gupta
            A, Hansen G, Hu Y, Huang W, Jaing C, Key BW Jr, Kipp P, Kohlhauff
            B, Ma ZQ, Markesich D, Payne R, Potter DG, Qian N, Shaw J, Schrick
            J, Shi ZZ, Sparks MJ, Van Sligtenhorst I, Vogel P, Walke W, Xu N,
            Zhu Q, Person C and Sands AT.
  TITLE     Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap
            screen to identify potential targets for therapeutic intervention
  JOURNAL   Proc Natl Acad Sci U S A 100 (24), 14109-14114 (2003)
   PUBMED   14610273
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL929106.5 and AL929068.20.
            
            On Jan 14, 2022 this sequence version replaced NM_001377044.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR5189682.76179.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164135 [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-123               AL929106.5         124441-124563
            124-172             AL929106.5         128616-128664
            173-1368            AL929106.5         129677-130872
            1369-1705           AL929068.20        2001-2337
FEATURES             Location/Qualifiers
     source          1..1705
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2"
     gene            1..1705
                     /gene="B3galt9"
                     /gene_synonym="Gm34653"
                     /note="beta-1,3-galactosyltransferase 9"
                     /db_xref="GeneID:102637973"
                     /db_xref="MGI:MGI:5593812"
     exon            1..123
                     /gene="B3galt9"
                     /gene_synonym="Gm34653"
                     /inference="alignment:Splign:2.1.0"
     exon            124..172
                     /gene="B3galt9"
                     /gene_synonym="Gm34653"
                     /inference="alignment:Splign:2.1.0"
     CDS             167..1273
                     /gene="B3galt9"
                     /gene_synonym="Gm34653"
                     /codon_start=1
                     /product="beta-1,3-galactosyltransferase 9"
                     /protein_id="NP_001363973.1"
                     /db_xref="GeneID:102637973"
                     /db_xref="MGI:MGI:5593812"
                     /translation="MQVTLCRLRTHQWCFILFNVILFHALLFGADFVEEYFLHSLPHV
                     DMKILDIKDKARKLNLEPLRGNPSKYYILNQPEVCNGKTIFLLSLIFSSPGNGTRRDL
                     IRKAWGSVTTVQGYPILTLFALGMPALVTTQEEIDAESQKNNDIIEGIFLDSSENQTL
                     KIISMTQWAVAFCPSALFILKADEMFINLPGLVDYLLNLKGHLEGIYLGRVIHQDIPN
                     RDPHSQEFVSLSEYPEKYYPDYCSGEAFILSQDVARMVYVVLNEAPVMVPADVFVGIC
                     AKSVGLIPIHSSRFSGERHITYNRCCYKFIFTSAEVTDAETSLAWKEVSDGKECSLFE
                     TYYGLISCKLLTYLDSFKHFHTGSAKDNAVYFGN"
     exon            173..1705
                     /gene="B3galt9"
                     /gene_synonym="Gm34653"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 actgactcag ctagttgctt aatagtttta aaatctattg gctcatgata ctatcgtccc
       61 tggccatcta agaagacagg gaaagtcagt ccaacttcct tccaaacctc tgggcaaaat
      121 aaggaactta ataatttctg aagccctgaa attgcccaca gacaacatgc aggtgacgct
      181 ctgccgactt cggactcacc agtggtgttt cattctcttt aacgtcatac tgtttcacgc
      241 attgcttttt ggagctgact ttgtagaaga atatttctta cattctttgc ctcatgtaga
      301 tatgaaaatt ctcgacatta aggacaaggc aagaaaattg aacctggaac ctttaagagg
      361 taatccctcc aagtattata tcctaaacca gccggaggtc tgtaatggga aaaccatctt
      421 tctgctctct cttatcttca gtagcccagg gaatggaaca agacgggacc tcatcaggaa
      481 agcctggggt agtgtgacca ctgtccaagg ctacccaatt ctcacgctgt ttgctctggg
      541 aatgccagca ttggtaacta ctcaagaaga gatagatgcg gagtctcaga agaataatga
      601 tatcattgaa gggatcttct tggacagttc tgaaaaccaa acactgaaga tcatctcaat
      661 gacccagtgg gctgtggcct tctgccccag tgccctgttc atactcaaag ctgacgagat
      721 gtttatcaat ctaccaggct tggtagacta tcttctcaat ctgaaaggtc acctggaagg
      781 tatctattta ggaagagtta ttcatcagga tatacctaac agagaccccc atagtcaaga
      841 atttgtctct cttagtgagt accccgaaaa atactaccca gactactgca gtggtgaggc
      901 ctttatactg tcccaagatg tggctcggat ggtgtacgtg gttttgaatg aagcacctgt
      961 tatggtgccc gccgatgtat ttgtagggat ctgtgctaag tccgtgggcc ttatacctat
     1021 ccacagttca aggttttctg gggaaagaca catcacatat aacagatgct gctacaagtt
     1081 catttttaca tctgcagaag ttacagatgc tgaaacttcc ctggcatgga aagaagtgag
     1141 tgatgggaag gagtgttccc tgtttgagac ttattacggg ctcatttcct gcaagcttct
     1201 gacatacctt gacagcttca agcattttca cacggggagc gcaaaagaca atgctgtgta
     1261 ttttgggaat tagtattcac tcgctgttag atgtcttctt cttctttttt tttttttgtt
     1321 tttttcgaga cagggtttct ctgtgtagcc ctggctgtcc tggaattcac tttgtagacc
     1381 aggctggcct cgaactcaga aatccacctg cctctgcctc ccgagtgcgg ggattaaagg
     1441 agtgcgccac cactgtccgg ctttagatgt cttcttctta aagtgctgtt ttcctattac
     1501 agaaggcaac tctctgggcc catgttaggt aacttctctg aatctattcg tacctagcaa
     1561 acccacaaga tgttcttagt gttctgatgt actcagtctt gacatcttga ttttgatgtt
     1621 taagtcattt aaaataggac ggtgtgatac ttttcaaaat aaaatctttc agaaaagaca
     1681 aaacattaaa tttcattata acata
//
