LOCUS       NM_020582                428 bp    mRNA    linear   ROD 26-JUN-2024
DEFINITION  Mus musculus ATP synthase membrane subunit f (Atp5mf), mRNA;
            nuclear gene for mitochondrial product.
ACCESSION   NM_020582
VERSION     NM_020582.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 428)
  AUTHORS   Zhang,D., Deng,W., Jiang,T., Zhao,Y., Bai,D., Tian,Y., Kong,S.,
            Zhang,L., Wang,H., Gao,S. and Lu,Z.
  TITLE     Maternal Ezh1/2 deficiency impairs the function of mitochondria in
            mouse oocytes and early embryos
  JOURNAL   J Cell Physiol 239 (6), e31244 (2024)
   PUBMED   38529784
REFERENCE   2  (bases 1 to 428)
  AUTHORS   Sharma,S., Kajjo,S., Harra,Z., Hasaj,B., Delisle,V., Ray,D.,
            Gutierrez,R.L., Carrier,I., Kleinman,C., Morris,Q., Hughes,T.R.,
            McInnes,R. and Fabian,M.R.
  TITLE     Uncovering a mammalian neural-specific poly(A) binding protein with
            unique properties
  JOURNAL   Genes Dev 37 (15-16), 760-777 (2023)
   PUBMED   37704377
REFERENCE   3  (bases 1 to 428)
  AUTHORS   Basta,J.M., Singh,A.P., Robbins,L., Stout,L., Pherson,M. and
            Rauchman,M.
  TITLE     The core SWI/SNF catalytic subunit Brg1 regulates nephron
            progenitor cell proliferation and differentiation
  JOURNAL   Dev Biol 464 (2), 176-187 (2020)
   PUBMED   32504627
REFERENCE   4  (bases 1 to 428)
  AUTHORS   Mootha,V.K., Bunkenborg,J., Olsen,J.V., Hjerrild,M.,
            Wisniewski,J.R., Stahl,E., Bolouri,M.S., Ray,H.N., Sihag,S.,
            Kamal,M., Patterson,N., Lander,E.S. and Mann,M.
  TITLE     Integrated analysis of protein composition, tissue diversity, and
            gene regulation in mouse mitochondria
  JOURNAL   Cell 115 (5), 629-640 (2003)
   PUBMED   14651853
REFERENCE   5  (bases 1 to 428)
  AUTHORS   Da Cruz,S., Xenarios,I., Langridge,J., Vilbois,F., Parone,P.A. and
            Martinou,J.C.
  TITLE     Proteomic analysis of the mouse liver mitochondrial inner membrane
  JOURNAL   J Biol Chem 278 (42), 41566-41571 (2003)
   PUBMED   12865426
REFERENCE   6  (bases 1 to 428)
  AUTHORS   Inoue,S., Sano,H. and Ohta,M.
  TITLE     Growth suppression of Escherichia coli by induction of expression
            of mammalian genes with transmembrane or ATPase domains
  JOURNAL   Biochem Biophys Res Commun 268 (2), 553-561 (2000)
   PUBMED   10679242
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC127411.3.
            
            On Apr 17, 2020 this sequence version replaced NM_020582.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BU534759.1, CN838669.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164143, SAMN02415134
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: reported by MitoCarta
            RefSeq Select criteria             :: based on single
                                                  protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-39                AC127411.3         166262-166300
            40-147              AC127411.3         170570-170677
            148-264             AC127411.3         173155-173271
            265-428             AC127411.3         173936-174099
FEATURES             Location/Qualifiers
     source          1..428
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 85.09 cM"
     gene            1..428
                     /gene="Atp5mf"
                     /gene_synonym="1110019H14Rik; Atp5j2"
                     /note="ATP synthase membrane subunit f"
                     /db_xref="GeneID:57423"
                     /db_xref="MGI:MGI:1927558"
     exon            1..39
                     /gene="Atp5mf"
                     /gene_synonym="1110019H14Rik; Atp5j2"
                     /inference="alignment:Splign:2.1.0"
     CDS             27..293
                     /gene="Atp5mf"
                     /gene_synonym="1110019H14Rik; Atp5j2"
                     /EC_number="3.6.1.14"
                     /function="expression of this gene product inhibits the
                     growth of E. coli"
                     /note="ATP synthase, H+ transporting, mitochondrial F0
                     complex, subunit f; hypothetical protein, clone:2-31; ATP
                     synthase, H+ transporting, mitochondrial F0 complex,
                     subunit F2"
                     /codon_start=1
                     /product="ATP synthase subunit f, mitochondrial"
                     /protein_id="NP_065607.1"
                     /db_xref="CCDS:CCDS39385.1"
                     /db_xref="GeneID:57423"
                     /db_xref="MGI:MGI:1927558"
                     /translation="MASLVPLKEKKLMEVKLGELPSWIMMRDFTPSGIAGAFRRGYDR
                     YYNKYINVRKGSISGISMVLAAYVVFSYCISYKELKHERRRKYH"
     exon            40..147
                     /gene="Atp5mf"
                     /gene_synonym="1110019H14Rik; Atp5j2"
                     /inference="alignment:Splign:2.1.0"
     exon            148..264
                     /gene="Atp5mf"
                     /gene_synonym="1110019H14Rik; Atp5j2"
                     /inference="alignment:Splign:2.1.0"
     exon            265..428
                     /gene="Atp5mf"
                     /gene_synonym="1110019H14Rik; Atp5j2"
                     /inference="alignment:Splign:2.1.0"
     regulatory      405..410
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Atp5mf"
                     /gene_synonym="1110019H14Rik; Atp5j2"
                     /note="hexamer: AATAAA"
     polyA_site      428
                     /gene="Atp5mf"
                     /gene_synonym="1110019H14Rik; Atp5j2"
                     /note="major polyA site"
ORIGIN      
        1 agttctgcgg acaccaggac ttcaagatgg cgtcactcgt gccgctgaag gagaagaagc
       61 tcatggaagt caaacttgga gagctgccga gctggataat gatgcgggat ttcaccccca
      121 gtggcattgc cggagccttt cggagagggt atgaccggta ttacaacaag tacatcaacg
      181 ttcggaaagg cagcatctcg gggattagca tggtcctggc agcctacgtg gttttcagct
      241 actgcatttc ttacaaggaa ctcaaacatg agcggcgacg caagtaccac tgaagagggg
      301 tcgctggagg gcattgcatg gccgagcata actgcccgcc ccactccgac ctaggaagaa
      361 ttcaactggc tgaaccttca taccctgact gagaactagt gtccaataaa aggtgactgg
      421 ttcacata
//
