LOCUS       NM_001159559            1084 bp    mRNA    linear   ROD 02-JUL-2024
DEFINITION  Mus musculus ATP23 metallopeptidase and ATP synthase assembly
            factor homolog (Atp23), transcript variant 1, mRNA; nuclear gene
            for mitochondrial product.
ACCESSION   NM_001159559
VERSION     NM_001159559.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1084)
  AUTHORS   Yang,G., Lu,S., Jiang,J., Weng,J. and Zeng,X.
  TITLE     Kub3 Deficiency Causes Aberrant Late Embryonic Lung Development in
            Mice by the FGF Signaling Pathway
  JOURNAL   Int J Mol Sci 23 (11), 6014 (2022)
   PUBMED   35682694
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1084)
  AUTHORS   Bedogni,F. and Hevner,R.F.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 1084)
  AUTHORS   Mu,X., Zhao,S., Pershad,R., Hsieh,T.F., Scarpa,A., Wang,S.W.,
            White,R.A., Beremand,P.D., Thomas,T.L., Gan,L. and Klein,W.H.
  TITLE     Gene expression in the developing mouse retina by EST sequencing
            and microarray analysis
  JOURNAL   Nucleic Acids Res 29 (24), 4983-4993 (2001)
   PUBMED   11812828
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BG801921.1, AK004405.1 and CB203044.1.
            
            Transcript Variant: This variant (1) uses an alternate splice site
            in its 3' terminal exon compared to variant 4. The encoded isoform
            (1) has a shorter and distinct C-terminus compared to isoform 4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK004405.1, SRR13861890.145304.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-23                BG801921.1         1-23
            24-736              AK004405.1         4-716
            737-1084            CB203044.1         352-699
FEATURES             Location/Qualifiers
     source          1..1084
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="10"
                     /map="10 73.84 cM"
     gene            1..1084
                     /gene="Atp23"
                     /gene_synonym="1110068E08Rik; 2410012H02Rik; Xrcc6bp1"
                     /note="ATP23 metallopeptidase and ATP synthase assembly
                     factor homolog"
                     /db_xref="GeneID:68876"
                     /db_xref="MGI:MGI:1916984"
     exon            1..270
                     /gene="Atp23"
                     /gene_synonym="1110068E08Rik; 2410012H02Rik; Xrcc6bp1"
                     /inference="alignment:Splign:2.1.0"
     exon            271..316
                     /gene="Atp23"
                     /gene_synonym="1110068E08Rik; 2410012H02Rik; Xrcc6bp1"
                     /inference="alignment:Splign:2.1.0"
     exon            317..398
                     /gene="Atp23"
                     /gene_synonym="1110068E08Rik; 2410012H02Rik; Xrcc6bp1"
                     /inference="alignment:Splign:2.1.0"
     exon            399..536
                     /gene="Atp23"
                     /gene_synonym="1110068E08Rik; 2410012H02Rik; Xrcc6bp1"
                     /inference="alignment:Splign:2.1.0"
     exon            537..620
                     /gene="Atp23"
                     /gene_synonym="1110068E08Rik; 2410012H02Rik; Xrcc6bp1"
                     /inference="alignment:Splign:2.1.0"
     exon            621..1067
                     /gene="Atp23"
                     /gene_synonym="1110068E08Rik; 2410012H02Rik; Xrcc6bp1"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1037..1042
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Atp23"
                     /gene_synonym="1110068E08Rik; 2410012H02Rik; Xrcc6bp1"
                     /note="hexamer: AATAAA"
     polyA_site      1067
                     /gene="Atp23"
                     /gene_synonym="1110068E08Rik; 2410012H02Rik; Xrcc6bp1"
                     /note="major polyA site"
ORIGIN      
        1 cttcgtgctg gcccgcggag cgtgcgccgg cggcggaagc ggctgtccta ggtcgagcgg
       61 gcaggaggag gcttgcgggc ctcatggcag gagctccggg cggcggcgag ctcggccctg
      121 cggctggcga gccactgctg cagcgacccg actctggcca gggctcgcct gagccgccgg
      181 cccacgggaa gccccagcag ggcttcctct ccagcctctt cacccgggac cagagttgtc
      241 cgctcatgct ccagaagacg ctggatacca atccatatgt caaacttcta cttgatgcta
      301 tgaaacactc aggttgtgct gtgaacaggg gaagacactt ttcctgcgaa gtctgcgatg
      361 gaaacgtcag cggaggcttt gatgcgtcta cgtctcagat tgttttgtgc gagaataaca
      421 tccggaatca ggcgcacatg ggcagggtcg tcacccacga gctcattcac gcgtttgacc
      481 actgccgggc tcacgtccac tggttcacca acatcagaca tctggcgtgc tcggagattc
      541 gagccgcaag cctcagcggg gactgctccc ttgtgaacga actcttcagg ctgcgttttg
      601 gattaaagca acatcatcag acttgcgtgc gggacagggc tgttctctct atcttggctg
      661 tccggaacgt cagcagagag gaggcccaga aggctgtgga tgaagtcttc cagacctgtt
      721 tcaatgaccg ggagcccttc ggcaggatcc cacataacca gacgtatgcc agatacgctc
      781 acagggactt tcagaaccgg gaccgctact actccaacat atgaagatgg tagccgcctg
      841 tcaggaccgt gaggaacatg gggttcttcg gcacagaatg tataaaatgt aaatggtcag
      901 ttagggtcta cgcataaagt gcagaacgtg ctgattttag cgtttgacta caaaaaattg
      961 gacacggcag aaaggaactc cttaaactgc agtgcagaaa tggaatcttc agagctaatc
     1021 attagtgaaa aatgtaaata aatgacattt ttgtattttt tacagtaaaa aaaaaaaaaa
     1081 aaaa
//
