LOCUS       XM_011238739            7494 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus astrotactin 1 (Astn1), transcript variant
            X1, mRNA.
ACCESSION   XM_011238739
VERSION     XM_011238739.4
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000067.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_011238739.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7494
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="1"
     gene            1..7494
                     /gene="Astn1"
                     /gene_synonym="Astn; GC14; mKIAA0289"
                     /note="astrotactin 1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 38 ESTs, 1941 long SRA
                     reads, and 100% coverage of the annotated genomic feature
                     by RNAseq alignments, including 13 samples with support
                     for all annotated introns"
                     /db_xref="GeneID:11899"
                     /db_xref="MGI:MGI:1098567"
     CDS             507..4463
                     /gene="Astn1"
                     /gene_synonym="Astn; GC14; mKIAA0289"
                     /codon_start=1
                     /product="astrotactin-1 isoform X1"
                     /protein_id="XP_011237041.1"
                     /db_xref="GeneID:11899"
                     /db_xref="MGI:MGI:1098567"
                     /translation="MALAGLCALFACCWGPAAVLATAAGDVDPSKELECKLKSITVSA
                     LPFLRENDLSIMHSPSASEPKLLFSVRNDFPGEMVVVDDLENTELPYFVLEISGNTED
                     IPLVRWRQQWLENGTLLFHIHHQDGAPSLPGQDPTEEPQHESAEEELRILHISVMGGM
                     IALLLSILCLVMILYTRRRWCKRRRVPQPQKSASAEAANEIHYIPSVLIGGHGRESLR
                     NARVQGHNSSGTLSIRETPILDGYEYDITDLRHHLQRECMNGGEDFASQVTRTLDSLQ
                     GCNEKSGMDLTPGSDNAKLSLMNKYKDNIIATSPVDSNHQQATLLSHTSSSQRKRINN
                     KARAGSAFLNPEGDSSTEAENDPQLTFYTDPSRSRRRSRVGSPRSPVNKTTLTLISVT
                     SCVIGLVCSSHVSCPLVVKITLHVPEHLIADGSRFILLEGSQLDASDWLNPAQVVLFS
                     QQNSSGPWAMDLCARRLLDPCEHQCDPETGRREHRAAGECLCYEGYMKDPVHKHLCIR
                     NEWGTNQGPWPYTIFQRGFDLVLGEQPSDKIFRFTYTLGEGMWLPLSKSFVIPPAELA
                     INPSAKCKTDMTVMEDAVEVREELMTSSSFDSLEVLLDSFGPVRDCSKDNGGCSKNFR
                     CISDRKLDSTGCVCPSGLSPMKDSSGCYDRHIGVDCSDGFNGGCEQLCLQQMAPFPED
                     PTLYNILMFCGCIEDYKLGVDGRSCQLVTETCPEGGDCGESREVPMNQTLFGEMFFGY
                     NNQSKEVATGQVLKGTFRQNNFARGLDQQLPDGLVVASVPLENQCLEEISEPTPDPDF
                     LTGMVNFSEVSGYPVLQHWKVRSVMYHIKLNQAAISQAFSNALHSLDGATSRADFVAL
                     LDQFGNHYIQEAVYGFEESCSIWYPNKQVQRRLWLEYEDISKGNSPSDESEERERDPK
                     VLTFPEYIASLSDSGTKRMAAGVRMECQSKGRCPSSCPLCHVTSSPETPAEPVLLEVT
                     RASPIYELVTNNQTQRSAFHRCDKTPDRINLKLLQEATMSSLWCSGTGDVIEDWCRCD
                     STAFGADGLPTCAPLPQPVLRLSTVHEPSSNLVVLEWEHSEPPIGVQIVDYLIRQEKV
                     TDRMDHSKVETETVLSFVDDIISGAKAPCAMPSQVPDKQLTTISLIIRCLEPDTIYMF
                     TLWGVDNTGRRSRPSDVIVKTPCPVVDDVKAQEIADKIYNLFNGYTSGKEQQTAYNTL
                     LDLGSPTLHRVLYHYNQHYESFGEFTWRCEDELGPRKAGLILSQLGDLSSWCNGLLQE
                     PKISLRRGSLKYLGCRYSEIKPYGLDWSELSRDLRKTCEEQTLSVPYNDYGDSKDI"
ORIGIN      
        1 agccctttaa ggtgtgtgcc agtgcatgcc ttttcccaag ccatttggat gctgctgcga
       61 caggagagat ttttgcatta caaagacgca attttaaaaa tgcagagcag gtagttaata
      121 accaagagcc ctggggatgg agaggaggag agaggcagga gcatcatcaa ccagctgggg
      181 gctgacctga ttccctagaa tccccagctc tcttcctctt tcctcccaac atccttcctt
      241 tcctttttct ctccccccca accccccttt cctttcccca gataagcagc tccgggaaac
      301 aaagagctgg gctctccaga cctcagcgct ggaacctaag gctctctgag tagcatctca
      361 tttcggggac cagggctctc gagctccgtg tcccctcccc aactcccccc cccccccccc
      421 gcctcccttg cttgctcgct gctccctccc tgctggctgc ctcccccacc atcgcagcgc
      481 tgggaggaag gcggccaggg ctcaagatgg ctttagccgg gctctgcgcc ctgttcgcct
      541 gctgctgggg gccggctgcg gtgctggcca cagctgccgg cgacgtggat ccatccaagg
      601 agctggagtg caagctcaag agcatcactg tgtcggcact gcccttcctg cgcgagaacg
      661 acctgagcat catgcacagt ccctcggcct ccgaacccaa gcttctcttc tccgtgcgca
      721 atgacttccc gggagaaatg gtcgtggtgg acgacctaga gaacacggag ctaccctatt
      781 tcgtgctgga gatctcaggg aatacagaag acatccccct ggtgcgctgg aggcagcaat
      841 ggctggagaa tggcacttta ctctttcata ttcaccacca agatggtgct ccaagtctcc
      901 ctggacaaga cccaactgaa gaaccccaac atgaatcagc agaggaagag ctgaggatcc
      961 tgcacatctc agtcatgggt ggcatgatcg ctctgttgct atccatcttg tgcctggtga
     1021 tgatcctgta cactcgcagg cgctggtgca aacgtcgccg ggttccccag ccccagaaga
     1081 gtgccagtgc agaggcagca aatgagattc actacatccc atctgtgctg attggaggcc
     1141 atgggcggga aagcttgcgc aatgcccgtg tgcagggcca caactccagt ggcactctga
     1201 gcattcggga gacacccatc ctggatggct atgagtatga catcacagac ctgcgtcacc
     1261 acctgcaaag ggagtgtatg aatggagggg aggactttgc cagtcaggtc acacgcactt
     1321 tggactccct acagggatgc aatgagaagt ctgggatgga tctaacacca gggagtgaca
     1381 atgccaagct ttccctgatg aacaagtata aagacaatat catagccaca agccccgtgg
     1441 attctaacca ccagcaagcc actctgctct cccacacctc cagcagccag agaaagagga
     1501 tcaacaataa agccagagct ggttctgcct tcttgaaccc tgaaggggac tccagcacag
     1561 aggccgaaaa tgacccacag ctgaccttct acacagaccc ctctcggagc cggaggcgca
     1621 gtcgagtggg ctctccccga agtcctgtga ataagaccac cttgaccctg atcagtgtca
     1681 ccagctgcgt gattggcctc gtgtgctctt ctcatgtcag ctgccctctt gttgtcaaga
     1741 tcaccctaca cgtccctgag cacttgatcg ctgatgggag ccgcttcatc ctgctggagg
     1801 ggagccagct ggatgccagt gactggctga accctgccca agtggttctc ttctctcagc
     1861 agaactccag cgggccctgg gccatggacc tctgtgcccg gcggctcctg gacccttgtg
     1921 aacaccaatg tgaccccgaa actggtaggc gggagcaccg ggcagcgggg gaatgcctgt
     1981 gctatgaagg ctacatgaag gatcctgtcc acaagcacct ttgcattcgg aatgaatggg
     2041 ggaccaacca ggggccttgg ccttacacga tatttcagcg aggctttgac ctggttttgg
     2101 gagagcaacc ctctgataag atattcagat tcacctatac cctcggggaa ggcatgtggt
     2161 tacccctcag taagagcttt gtgattccac cagccgaact agccatcaat ccatcagcaa
     2221 agtgtaagac ggatatgact gtgatggaag atgctgtaga ggtcagagag gagctgatga
     2281 catcatcatc ctttgacagc ctggaggtcc tattagactc ctttgggcca gtgcgtgatt
     2341 gcagcaaaga taacggaggc tgcagtaaga attttcgctg catttcagat cgcaagttgg
     2401 actctactgg ttgtgtgtgt ccttcaggac tcagccctat gaaggacagc tcaggctgct
     2461 atgatcgcca tatcggagtg gactgctcag atggtttcaa cggcggctgc gaacagctgt
     2521 gtctccagca gatggcgccg ttcccagagg accccacctt gtacaacatc cttatgttct
     2581 gcgggtgtat cgaagactac aagcttggtg tggatggacg ctcttgccaa cttgtcactg
     2641 agacctgccc agagggaggt gactgtgggg aaagcagaga ggttcccatg aaccagactc
     2701 tctttggaga aatgttcttt ggctacaaca accagtccaa ggaagtagcc actggacagg
     2761 tgctaaaagg aacattcaga cagaacaact ttgctcgtgg tttagaccag caactgccgg
     2821 atggtcttgt ggttgcctct gtcccactgg agaatcagtg cctagaggaa atctcagagc
     2881 ccaccccaga ccctgacttc ttgactggga tggtgaactt cagtgaagtg tctggatacc
     2941 cggtgctgca gcactggaag gttcggtctg tgatgtacca catcaaactc aaccaagcag
     3001 ccatctcgca ggccttcagc aatgctcttc actccttgga tggggctaca tctcgtgcag
     3061 attttgtggc tttgttggat cagtttggaa accattacat ccaggaagct gtctacggct
     3121 ttgaggaatc ctgttctata tggtacccaa acaagcaagt ccagcggaga ctctggctgg
     3181 aatatgaaga catcagtaaa ggcaactctc catctgatga gtcggaggag cgggaaaggg
     3241 atcccaaggt gctgacattc ccagaataca tcgctagcct gtcagactct ggcaccaagc
     3301 gaatggcagc tggagtccgg atggagtgcc agagcaaggg acggtgtccc tcatcctgtc
     3361 ctttatgtca tgtgacatcc agccctgaaa cccctgctga gccagttcta ctggaagtga
     3421 ccagagcatc ccccatctat gaactggtga ccaataacca gacccagagg tcagcttttc
     3481 atcgctgtga caaaacaccc gacagaatca acttaaaact cttacaggaa gccaccatga
     3541 gctctctctg gtgttcaggg accggagatg tcattgagga ctggtgccga tgcgactcga
     3601 ctgcttttgg agcagatgga cttcctacct gtgcacccct cccacagcct gtgctgagac
     3661 tttccacagt acacgagccc agcagtaacc tcgtggtcct ggagtgggaa cattcagagc
     3721 cgccaattgg ggtgcagatt gtagactacc tgatccggca agagaaagtc actgaccgga
     3781 tggaccactc caaagtagag acggaaacag tgctgagctt tgtagacgac atcatctctg
     3841 gagcaaaggc tccatgtgcc atgccgtctc aggtgccaga caaacagctc accacgattt
     3901 ctctcatcat ccgatgcctg gaacctgaca ccatttacat gttcaccctc tggggagtag
     3961 ataacacagg gcgacgttcc aggccaagtg atgtgattgt gaagacccca tgtcctgtgg
     4021 tggatgatgt caaagcccaa gaaatagcag acaagatcta caatctcttc aatggctaca
     4081 ccagtggaaa ggagcaacag actgcctaca acacccttct ggatctgggt tctcccactt
     4141 tgcaccgagt cctctaccac tataaccagc actatgagag ttttggggaa ttcacctggc
     4201 ggtgtgaaga tgagttagga cccaggaaag caggcctcat cctttcccag cttggagatc
     4261 tgagcagctg gtgcaatgga ctccttcagg agcccaagat aagcttgagg cgtggttcac
     4321 tcaagtacct gggctgccgc tacagtgaga tcaaacccta tggactggac tggtcagagc
     4381 tcagtcggga cctcaggaag acatgtgaag aacagaccct gagtgtcccc tacaatgact
     4441 acggggacag caaagacatc tagcatcatg ggaccaggaa ataactgcag aaataaagca
     4501 ggggagaaga gggcaacatc tgggttggtt tgtggattct tagacatttt ttaatggaac
     4561 acccaaagct ctacaagtcc cttctaaacc aggaagaggg tagacctttg ctccctgcaa
     4621 gatttgtcca gtgtgatatt ctccacctgc atgaccagtc aacccgccag ccagtagctt
     4681 catgcagcac tgttcgtttt tgtttttgtt tttgtttttg tttttgtttt tttcttagaa
     4741 gattaccttg aaactcactt tggtatccat tggttttgtt cactttttcg ccttcagtca
     4801 acccatcagg attctcaaga gcactatcct gcatcctaca gcaggtctaa tgtggaggct
     4861 cttctgccta atgggttccc aagtctatga cacctgggga cagaagtgag ggcataaagc
     4921 ttctgctgcc tcatgccctt gctcaggcat ttcttaggaa gcatcagaat gttgggagcc
     4981 aaggcatgta ctgaagaaga taataaatga cccatgccct tttctcatgg gttttccccc
     5041 agactctctc ctgttactgt ttccacacct cagaggtaaa cctaagctct gttacaggac
     5101 tgttggacat aacagagatt taggtctctc ttcccccatt ttaaaccagg actccaagtt
     5161 ctcgttgatt tctgtccttt cttctaaaca acctgatctt tgagaggcag tgagataata
     5221 cctgttaaat atggctccag agagggctac ctgcaagatt atttagtagc cttcactgta
     5281 ggaaataagt ggagtttatt taaaaaaaaa aacagttgta catgtctaga gtatcatcag
     5341 agtcctaaga gccttgattc tgcttggtcc caggcctttt tccctggaca gaaaggactt
     5401 ggctgttgtt tgctttagtc caggaatgag attatttctt gtcagtgttt tagtgaacta
     5461 aagctcttat caatctgaaa agtacttctg tccgcactgc cctcactaaa ttttcttaat
     5521 tatattgtaa attttgacag cctattctct gatgaaaatc atcagtactc tgtcattgtc
     5581 actgcctgcc cacccaactc tgccagttac tgaagagcaa cagagcctct ggagagacct
     5641 gaacatctga tgattgcaca taaggactga ggctccattt gcacacactg cccaaggatg
     5701 atgatacggt gaactagcta ctaggaagcc tagcctgtta gaaacaacct catgggacca
     5761 gaatgactaa caatgaccca atgtacattc agccagcttg ccttgactgg aattcttcat
     5821 gtggaaacac agccttcatg tggaaggctc tataattcag ccactgagcc ttattcatac
     5881 tttccaatta ggaataatga cagatgacat ctgaggtgtg atgtgtgcta ctataaataa
     5941 caggaatctc acagaacccc taaagaaagt tctattccta ttcactattc ttttagtaat
     6001 gaggaaaaca aggaagtgag gtgacttgcc attccccagg tccctcatac actatatacc
     6061 ctgagctgca gtgcctctag aacacaggag tttaactact ctgtgttgcc taaagcatat
     6121 gactgttgaa gctctaagct ctactgggaa catgcccaga gaacttcacc ttcctaaggg
     6181 accgtgtaca aatatacaat gagtcaaagt acacccatag cctttggagt cagggcacct
     6241 ttggtatgct caacactgtg gcacactagc ttccccactg atgaatagga aggaaattca
     6301 gttgcaggct ggtcttattt ctctctttgc ttctttgcag agaaatattg gaaaacttgc
     6361 cttgtacttt ttggcctcag agataccatc acttttagaa caaaacacag cagaaaactt
     6421 agctggcttt cctctggcca gcatagggat ttcagtaaaa gtgcatccga aggaagcttg
     6481 ttcactattg ccagagaaga ggatgctatg ggacagtgtg gcagtgtgga cagcatccct
     6541 ttactgccgt tctttttcca ctcttctgtt caatcctatg aagaaaagag tgtcttcttt
     6601 tgaacagaat gatagtgaga ctgtggatgc cttccagccc tgttggagat aggaacttat
     6661 gggctcagga gggaggacag gagtgatata atgatcacta ctgttaccca ccccatcttt
     6721 tattccagac atactctcct cctctctttt acctttatgc cccattttcc aaagattttt
     6781 cacctctcac acacatatct cctttatcct ccatctttcc cccctcttcc catcgactgc
     6841 cttattcttt cagtgtgctc ttgtgttttc tcttcagatg tgtgtgtgtc tatacacaca
     6901 ctcactccca agcaccacgt acatagctcc tattattgga gcaatgtact tttgagttaa
     6961 aaactccaac atgaatggat tgggggtcgt ctggagatgg ttctacatgt tgctggagga
     7021 cttttaccct cagagagatc atatcacacc ctgccaatga ttctcagttt ttgcctggag
     7081 gaactgtcta gaaaggctaa tgtaatgaag ccagtattaa acctcatttc taagctgcca
     7141 aacaggtctt aagggagcca cttctgtcca cctaaccacc tccagctctg tgtccagctg
     7201 agatctctat tgtttcctct tgaatgtcca cgaaccactg tatagcatca gacccttaaa
     7261 tgagtgtgca attgtttctc ttgaagtttg gtccattcgt tatttttaat taactgcact
     7321 tcttgatatt caaatgttct attaaaaata attgtgaaaa acactccact actgtagaag
     7381 aaagaggtgg tacaatgtga ccaacttcaa ctacaacagt gttgtttaag agatttattg
     7441 tacgattatg aaaaatgaag taatcgacta aataataaac aaagctgtca gtaa
//
