LOCUS       NM_133728               2450 bp    mRNA    linear   ROD 03-JUN-2024
DEFINITION  Mus musculus asparagine synthetase domain containing 1 (Asnsd1),
            transcript variant 1, mRNA.
ACCESSION   NM_133728 XM_906709 XM_920007 XM_920033 XM_920046 XM_920057
            XM_920067
VERSION     NM_133728.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2450)
  AUTHORS   Vogel,P., Ding,Z.M., Read,R., DaCosta,C.M., Hansard,M., Small,D.L.,
            Ye,G.L., Hansen,G., Brommage,R. and Powell,D.R.
  TITLE     Progressive Degenerative Myopathy and Myosteatosis in
            ASNSD1-Deficient Mice
  JOURNAL   Vet Pathol 57 (5), 723-735 (2020)
   PUBMED   32638637
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK168534.1, AK031295.1 and AA170909.1.
            
            On Mar 21, 2014 this sequence version replaced NM_133728.2.
            
            Transcript Variant: This variant (1) represents the longer
            transcript and encodes the longer isoform (1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK049194.1, AK170510.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164133, SAMN01164134
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-42                AK168534.1         2-43
            43-2226             AK031295.1         1-2184
            2227-2450           AA170909.1         161-384
FEATURES             Location/Qualifiers
     source          1..2450
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="1"
                     /map="1 26.99 cM"
     gene            1..2450
                     /gene="Asnsd1"
                     /gene_synonym="2210409M21Rik"
                     /note="asparagine synthetase domain containing 1"
                     /db_xref="GeneID:70396"
                     /db_xref="MGI:MGI:1917646"
     exon            1..223
                     /gene="Asnsd1"
                     /gene_synonym="2210409M21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            224..277
                     /gene="Asnsd1"
                     /gene_synonym="2210409M21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            278..353
                     /gene="Asnsd1"
                     /gene_synonym="2210409M21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            354..1897
                     /gene="Asnsd1"
                     /gene_synonym="2210409M21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1898..2079
                     /gene="Asnsd1"
                     /gene_synonym="2210409M21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2080..2442
                     /gene="Asnsd1"
                     /gene_synonym="2210409M21Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2397..2402
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Asnsd1"
                     /gene_synonym="2210409M21Rik"
                     /note="hexamer: AATAAA"
     polyA_site      2417
                     /gene="Asnsd1"
                     /gene_synonym="2210409M21Rik"
                     /note="major polyA site"
ORIGIN      
        1 gtgagtgtgc gcactccatt ggtcggggtg ccggaagggg cggattcctg agtggaaccc
       61 aggcttcctg ccggggctgc tggctgccgt tccttcctca gtcgcggttc ttggcgtgcg
      121 gcgcggctag gcgatgccca gcagtggggt gcacgccgat ggccgcgccg cgccggggcc
      181 cccacacaca tcgactgcgc acgccgagtc ccttagcagc aagattaaag aacagaaaat
      241 tattgtggat gaactttcta atctaaagaa gaatcggaga gtatacaagc agcaacagaa
      301 cagcaacata ttctttcttg aagatcgaac aaaaatcttt tctgaaagca aaaatacatt
      361 agacgaacta aaaaaagaat accaagcatt agaaacctcc gagacaacca aagtcaagac
      421 acagtcaacc tgacttcaca taaccatgtg tggcatttgc tgttctgtaa gcttctctat
      481 tgaacacttc agtaaagagt taaaagagga tttgctgcat aatcttagac ggcggggccc
      541 caacagcagc aggcagttgt taaaatctgc tgttaactat cagtgtttat tttctggtca
      601 tgttcttcat ttaagaggtg ttttgactat ccaacctgta gaagatgaac atggcaatgt
      661 gttcttatgg aatggagaag tttttaatgg agtaaaggtt gaagcagaag ataatgacac
      721 ccaggttatg ttcaatagcc tttctgcctg taagaatgag tctgaaattt tgctgctctt
      781 ctctaaagtg caaggtccat ggtcgtttat ctattatcag gcctctagcc atcacttatg
      841 gtttggtagg gacttttttg gtcggcgtag cttgctttgg cagtttagta atctgggcaa
      901 gagtttctgc ctttcgtcag ttggtaccca ggtatatgga gttgcagacc agtggcaaga
      961 agttccagca tctggaattt tccagattga tctcaattct gctgctgttt ccagatctgt
     1021 gatcttaaaa ttatatcctt ggagatacat ttctaaggag gatattgccg aagaatgtgg
     1081 taatgacctg actcagactc cagcaggatt gccagagttt gtatcagtgg taataaatga
     1141 agccaacctg tacctctcaa aacctgtcgt tcccttaaat aagaagctgc ctgagagtcc
     1201 attggaaatc caatgtagaa acagttctag cacttcaggt acaagagaga cacttgaggt
     1261 atttcttaca gatgaacaca caaaaaaaat agttcagcag ttcattgcca tcctcaatgt
     1321 ttcagtcaag agacgcatct tatgtttagc tagggaagaa aacctggcat caaaggaagt
     1381 tttaaaaact tgcagttcga aagcaaacat tgcgatcctg ttttctggag gtgttgattc
     1441 tatggtgatt gcagcccttg ctgatcgtca tattccttta gatgagccaa ttgatcttct
     1501 gaatgtggct tttgtgccta aacaaaaaac agggctacct attcctaaca tagaaagaaa
     1561 acagcagaac caccatgaga tcccttctga agagtcctct cagagtcctg ctgcagatga
     1621 ggggccaggt gaggctgagg taccagaccg agtcacagga aaagcaggac taaaggaact
     1681 acagtctgtc aacccttctc gaacttggaa ttttgtggaa ataaatgttt ctcttgaaga
     1741 actacaaaaa ctaagaagag ctcgaatatg tcacttagtt cagccattgg acacagttct
     1801 ggatgatagc attggctgtg ctgtgtggtt tgcttctaga ggaatcggtt ggttggtgac
     1861 ccaagatgct gtgagatctt acaagagcag tgcaaaggtg attcttactg ggattggtgc
     1921 agatgagcag ttggcaggtt attcccgtca tcgtgcccgc tttcagtctc ttggcctaga
     1981 aggactgaac gaggaaatag caatggaatt gggtcgcatt tcttctagaa accttggtcg
     2041 tgatgacaga gttattggtg atcatggaaa ggaagcaaga tttcctttcc tggatgaaaa
     2101 tgttgtgtct ttcctaaatt ctctgccagt ttgggaaaag gtagacctca ctctgccccg
     2161 tggagttggt gagaagctta ttttacgcct tgcagctatg gaacttggtc tcccagcctc
     2221 tgcccttctg ccaaaacgag ccatacaatt tggatctaga attgcaaaac tggaaaaatc
     2281 taatgagaag gcatctgata agtgtggaag gctccaaatc ctaccttaga aaacctctct
     2341 caaaattaca tcataataag attattctat cctgtacttt gtgacagtta cctcaaaata
     2401 aacagctgct gccttactgt ggggtgtagt agtttcacat ttaaaaaaaa
//
