LOCUS       NM_001353501             583 bp    mRNA    linear   ROD 03-JUN-2024
DEFINITION  Mus musculus Asnsd1 upstream reading frame (Asdurf), mRNA.
ACCESSION   NM_001353501
VERSION     NM_001353501.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 583)
  AUTHORS   Slavoff,S.A., Mitchell,A.J., Schwaid,A.G., Cabili,M.N., Ma,J.,
            Levin,J.Z., Karger,A.D., Budnik,B.A., Rinn,J.L. and Saghatelian,A.
  TITLE     Peptidomic discovery of short open reading frame-encoded peptides
            in human cells
  JOURNAL   Nat Chem Biol 9 (1), 59-64 (2013)
   PUBMED   23160002
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC153650.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BG802465.1, CN686184.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384, SAMN01164133
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-223               AC153650.4         63540-63762
            224-277             AC153650.4         65359-65412
            278-353             AC153650.4         66230-66305
            354-583             AC153650.4         67734-67963
FEATURES             Location/Qualifiers
     source          1..583
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="1"
                     /map="1"
     gene            1..583
                     /gene="Asdurf"
                     /gene_synonym="Asnsd1; ASNSD1-SEP; Gm50478"
                     /note="Asnsd1 upstream reading frame"
                     /db_xref="GeneID:110599589"
                     /db_xref="MGI:MGI:5905289"
     exon            1..223
                     /gene="Asdurf"
                     /gene_synonym="Asnsd1; ASNSD1-SEP; Gm50478"
                     /inference="alignment:Splign:2.1.0"
     CDS             134..433
                     /gene="Asdurf"
                     /gene_synonym="Asnsd1; ASNSD1-SEP; Gm50478"
                     /note="Asparagine synthetase domain-containing protein 1"
                     /codon_start=1
                     /product="ASNSD1 upstream open reading frame protein"
                     /protein_id="NP_001340430.1"
                     /db_xref="CCDS:CCDS87828.1"
                     /db_xref="GeneID:110599589"
                     /db_xref="MGI:MGI:5905289"
                     /translation="MPSSGVHADGRAAPGPPHTSTAHAESLSSKIKEQKIIVDELSNL
                     KKNRRVYKQQQNSNIFFLEDRTKIFSESKNTLDELKKEYQALETSETTKVKTQST"
     exon            224..277
                     /gene="Asdurf"
                     /gene_synonym="Asnsd1; ASNSD1-SEP; Gm50478"
                     /inference="alignment:Splign:2.1.0"
     exon            278..353
                     /gene="Asdurf"
                     /gene_synonym="Asnsd1; ASNSD1-SEP; Gm50478"
                     /inference="alignment:Splign:2.1.0"
     exon            354..583
                     /gene="Asdurf"
                     /gene_synonym="Asnsd1; ASNSD1-SEP; Gm50478"
                     /inference="alignment:Splign:2.1.0"
     regulatory      491..496
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Asdurf"
                     /gene_synonym="Asnsd1; ASNSD1-SEP; Gm50478"
                     /note="hexamer: AGTAAA"
     polyA_site      510
                     /gene="Asdurf"
                     /gene_synonym="Asnsd1; ASNSD1-SEP; Gm50478"
                     /note="major polyA site"
ORIGIN      
        1 gtgagtgtgc gcactccatt ggtcggggtg ccggaagggg cggattcctg agtggaaccc
       61 aggcttcctg ccggggctgc tggctgccgt tccttcctca gtcgcggttc ttggcgtgcg
      121 gcgcggctag gcgatgccca gcagtggggt gcacgccgat ggccgcgccg cgccggggcc
      181 cccacacaca tcgactgcgc acgccgagtc ccttagcagc aagattaaag aacagaaaat
      241 tattgtggat gaactttcta atctaaagaa gaatcggaga gtatacaagc agcaacagaa
      301 cagcaacata ttctttcttg aagatcgaac aaaaatcttt tctgaaagca aaaatacatt
      361 agacgaacta aaaaaagaat accaagcatt agaaacctcc gagacaacca aagtcaagac
      421 acagtcaacc tgacttcaca taaccatgtg tggcatttgc tgttctgtaa gcttctctat
      481 tgaacacttc agtaaagagt taaaagagga tttgctgcat aatcttagac ggcggggccc
      541 caacagcagc aggcagttgt taaaatctgc tgttaactat cag
//
