LOCUS       NM_029569               1579 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus ankyrin repeat and SOCs box-containing 5 (Asb5),
            transcript variant 1, mRNA.
ACCESSION   NM_029569
VERSION     NM_029569.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1579)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 1579)
  AUTHORS   Gineste,C., De Winter,J.M., Kohl,C., Witt,C.C., Giannesini,B.,
            Brohm,K., Le Fur,Y., Gretz,N., Vilmen,C., Pecchi,E., Jubeau,M.,
            Cozzone,P.J., Stienen,G.J., Granzier,H., Labeit,S.,
            Ottenheijm,C.A., Bendahan,D. and Gondin,J.
  TITLE     In vivo and in vitro investigations of heterozygous nebulin
            knock-out mice disclose a mild skeletal muscle phenotype
  JOURNAL   Neuromuscul Disord 23 (4), 357-369 (2013)
   PUBMED   23375831
REFERENCE   3  (bases 1 to 1579)
  AUTHORS   Yokoyama,S., Ito,Y., Ueno-Kudoh,H., Shimizu,H., Uchibe,K.,
            Albini,S., Mitsuoka,K., Miyaki,S., Kiso,M., Nagai,A., Hikata,T.,
            Osada,T., Fukuda,N., Yamashita,S., Harada,D., Mezzano,V., Kasai,M.,
            Puri,P.L., Hayashizaki,Y., Okado,H., Hashimoto,M. and Asahara,H.
  TITLE     A systems approach reveals that the myogenesis genome network is
            regulated by the transcriptional repressor RP58
  JOURNAL   Dev Cell 17 (6), 836-848 (2009)
   PUBMED   20059953
REFERENCE   4  (bases 1 to 1579)
  AUTHORS   Kile,B.T., Metcalf,D., Mifsud,S., DiRago,L., Nicola,N.A.,
            Hilton,D.J. and Alexander,W.S.
  TITLE     Functional analysis of Asb-1 using genetic modification in mice
  JOURNAL   Mol Cell Biol 21 (18), 6189-6197 (2001)
   PUBMED   11509662
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC102933.6.
            
            On Apr 30, 2007 this sequence version replaced NM_029569.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK003770.1, AF398966.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849381
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-310               AC102933.6         35758-36067
            311-390             AC102933.6         66253-66332
            391-498             AC102933.6         68978-69085
            499-649             AC102933.6         70086-70236
            650-784             AC102933.6         70406-70540
            785-976             AC102933.6         71198-71389
            977-1579            AC102933.6         72661-73263
FEATURES             Location/Qualifiers
     source          1..1579
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="8"
                     /map="8 29.27 cM"
     gene            1..1579
                     /gene="Asb5"
                     /gene_synonym="1110018D09Rik"
                     /note="ankyrin repeat and SOCs box-containing 5"
                     /db_xref="GeneID:76294"
                     /db_xref="MGI:MGI:1923544"
     exon            1..310
                     /gene="Asb5"
                     /gene_synonym="1110018D09Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             115..1104
                     /gene="Asb5"
                     /gene_synonym="1110018D09Rik"
                     /note="isoform 1 is encoded by transcript variant 1;
                     ankyrin repeat and SOCs box-containing protein 5; ankyrin
                     repeat and SOCS box protein 5; ASB-5"
                     /codon_start=1
                     /product="ankyrin repeat and SOCS box protein 5 isoform 1"
                     /protein_id="NP_083845.1"
                     /db_xref="CCDS:CCDS22307.1"
                     /db_xref="GeneID:76294"
                     /db_xref="MGI:MGI:1923544"
                     /translation="MSVLEESRPFAQQLSNVYFTILSLFCFKLFVKISLAILSHFYIV
                     KGNRKEAARIAAEFYGVSQGQGSWADRSPLHEAASQGRLLALRTLLSQGYNVNAVTID
                     HVTPLHEACLGDHVACARTLLEAGANANAITIDGVTPLFNACSQGSASCAELLLEYGA
                     KAQLESCFPSPTHEAASKGHHECLDILIAWGIDVDQDIPHLGTPLYVACMSQQFHCIW
                     KLLYAGADVHKGKYWDTPLHAAAQQPSTEIVNLLLEFGADINAKNTDLLRPVDLATSN
                     SAVERILLQHEATPSSLCQLCRLCIRNYIGRQRFHLIPQLQLPTLLQNFLQYR"
     exon            311..390
                     /gene="Asb5"
                     /gene_synonym="1110018D09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            391..498
                     /gene="Asb5"
                     /gene_synonym="1110018D09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            499..649
                     /gene="Asb5"
                     /gene_synonym="1110018D09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            650..784
                     /gene="Asb5"
                     /gene_synonym="1110018D09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            785..976
                     /gene="Asb5"
                     /gene_synonym="1110018D09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            977..1579
                     /gene="Asb5"
                     /gene_synonym="1110018D09Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 accagttgat attttcttcc cttcggacca gctgttcaag agcatcccgg aacagagcca
       61 gacacagttg agacttggct gggacctaac actagggcag atttctctgc aacaatgtcg
      121 gtgttagaag aaagccggcc atttgctcaa cagctatcta atgtctattt tacgatactc
      181 tccctcttct gttttaaact ttttgtgaag atcagccttg ccatccttag tcatttctac
      241 atcgtgaaag gcaaccgaaa ggaagccgca aggatagcag ctgagtttta tggagtaagc
      301 caaggacaag gatcctgggc agatcgatca ccactgcatg aagctgcaag tcaaggtcgt
      361 cttcttgctc tgaggacatt gctatcacaa ggatataatg taaatgcagt aaccatagac
      421 catgtcactc cactccatga ggcctgccta ggtgaccacg tggcctgtgc aaggactctc
      481 ctggaagctg gggctaatgc aaacgcaatc accatagatg gcgtgactcc cttgttcaac
      541 gcatgctcac aaggcagcgc aagttgtgca gaactccttt tggaatatgg tgccaaagcc
      601 caactggagt cctgttttcc atctccaaca catgaggctg ccagtaaagg tcaccatgaa
      661 tgtctcgaca ttttgatagc ctggggcata gatgttgacc aagacatacc tcacttggga
      721 actcctcttt atgtagcttg tatgtcacag cagttccatt gcatctggaa gcttctttat
      781 gctggtgctg atgtgcacaa aggcaagtac tgggacacgc cactgcatgc tgccgctcaa
      841 caacccagta ccgaaatcgt gaacttactg ctagaatttg gagcagacat caatgcaaag
      901 aacacagatc tcttgcggcc tgtcgacttg gctacatcta acagtgctgt agaaagaata
      961 cttcttcaac atgaagctac cccaagctct ctttgccaac tgtgccgact ctgcatccga
     1021 aactacatag gaagacaaag gttccatctt atccctcagc tccagttacc aacattgctg
     1081 cagaatttct tacagtatcg ataacacaga aaatagtttc acattcttaa gaaatcaaaa
     1141 ttttctattt tggtttcttt ttaaaatata gaagataagg gtgatgatgc atataagttc
     1201 acccagcaaa gccgtaaaat ctaagtggat tttcatctga agaatactca ttggtactgt
     1261 ttatcaattt ttacggtctt tggtttatat ttaaaacatc tatatcatct cagcattctt
     1321 ggtgtatctt cttgatttag gggaaagatg ggaatttatt cattttatgt ttttttatta
     1381 tagagtggaa agaaaattgt acacttttgc taaaatatta gtttaattat aaatttcatc
     1441 ctatgttaca ttttgaagga tctgtattct caaaaatggt taactgtaat ttcagatact
     1501 gtcattggtt acctgtgttt ttaatattgt caaaaattag agcaattaat atgctttttg
     1561 aaataaagat gacttatgc
//
