LOCUS       NM_001007578            2034 bp    mRNA    linear   ROD 03-JUN-2024
DEFINITION  Mus musculus armadillo repeat containing, X-linked 6 (Armcx6),
            mRNA.
ACCESSION   NM_001007578 XM_204367
VERSION     NM_001007578.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2034)
  AUTHORS   Zhou,J., McCarrey,J.R. and Wang,P.J.
  TITLE     A 1.1-Mb segmental deletion on the X chromosome causes meiotic
            failure in male mice
  JOURNAL   Biol Reprod 88 (6), 159 (2013)
   PUBMED   23677977
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2034)
  AUTHORS   Lopez-Domenech,G., Serrat,R., Mirra,S., D'Aniello,S., Somorjai,I.,
            Abad,A., Vitureira,N., Garcia-Arumi,E., Alonso,M.T.,
            Rodriguez-Prados,M., Burgaya,F., Andreu,A.L., Garcia-Sancho,J.,
            Trullas,R., Garcia-Fernandez,J. and Soriano,E.
  TITLE     The Eutherian Armcx genes regulate mitochondrial trafficking in
            neurons and interact with Miro and Trak2
  JOURNAL   Nat Commun 3, 814 (2012)
   PUBMED   22569362
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 2034)
  AUTHORS   Carninci,P., Waki,K., Shiraki,T., Konno,H., Shibata,K., Itoh,M.,
            Aizawa,K., Arakawa,T., Ishii,Y., Sasaki,D., Bono,H., Kondo,S.,
            Sugahara,Y., Saito,R., Osato,N., Fukuda,S., Sato,K., Watahiki,A.,
            Hirozane-Kishikawa,T., Nakamura,M., Shibata,Y., Yasunishi,A.,
            Kikuchi,N., Yoshiki,A., Kusakabe,M., Gustincich,S., Beisel,K.,
            Pavan,W., Aidinis,V., Nakagawara,A., Held,W.A., Iwata,H., Kono,T.,
            Nakauchi,H., Lyons,P., Wells,C., Hume,D.A., Fagiolini,M.,
            Hensch,T.K., Brinkmeier,M., Camper,S., Hirota,J., Mombaerts,P.,
            Muramatsu,M., Okazaki,Y., Kawai,J. and Hayashizaki,Y.
  TITLE     Targeting a complex transcriptome: the construction of the mouse
            full-length cDNA encyclopedia
  JOURNAL   Genome Res 13 (6B), 1273-1289 (2003)
   PUBMED   12819125
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK160766.1, BY777182.1 and AL772348.2.
            
            On Oct 22, 2009 this sequence version replaced NM_001007578.1.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC027264.1, AK148507.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164139, SAMN01164143
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-98                AK160766.1         2-99
            99-359              BY777182.1         79-339
            360-2034            AL772348.2         33297-34971         c
FEATURES             Location/Qualifiers
     source          1..2034
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 56.25 cM"
     gene            1..2034
                     /gene="Armcx6"
                     /note="armadillo repeat containing, X-linked 6"
                     /db_xref="GeneID:278097"
                     /db_xref="MGI:MGI:2147993"
     exon            1..90
                     /gene="Armcx6"
                     /inference="alignment:Splign:2.1.0"
     exon            91..183
                     /gene="Armcx6"
                     /inference="alignment:Splign:2.1.0"
     exon            184..263
                     /gene="Armcx6"
                     /inference="alignment:Splign:2.1.0"
     exon            264..2034
                     /gene="Armcx6"
                     /inference="alignment:Splign:2.1.0"
     CDS             409..1314
                     /gene="Armcx6"
                     /codon_start=1
                     /product="protein ARMCX6"
                     /protein_id="NP_001007579.1"
                     /db_xref="CCDS:CCDS30399.1"
                     /db_xref="GeneID:278097"
                     /db_xref="MGI:MGI:2147993"
                     /translation="MGRAREMGWMAAGLMIGAGACYCMYKLTMGRSEGNELEDEEEDE
                     WEDGQDLDEEEADNWFDFTAMARPWSEDGDWDEPGAPGGTEDRRSGGGKANRAHPIKQ
                     RPFPYEHKNIWGEQSFKSFTCILDLNKCVSTQRKKRFTKNINAGFSLSPNISKHLASL
                     SVVGNRSPTPHPTVREKALFVPENPNSSLENQGQIKMSIDEVCRETLLCCCKSFLQQA
                     GLSLLISMTVINNMLAKSVSDLKFPLLSKGSGCAEVRGLEELMSLSEKPVLVGEALAA
                     QMLSSFMCLFTRSGSREMLVEAISP"
     regulatory      1994..1999
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Armcx6"
                     /note="hexamer: AATAAA"
     polyA_site      2029
                     /gene="Armcx6"
                     /note="major polyA site"
ORIGIN      
        1 gaagtcctgt tagtcgcctc tgactgggta ccaaccccct attactctgc aggcgcgtga
       61 aggagaagga aactcgctgg gaccgtgcag gtctccgctg gagcctagac ttgagaagaa
      121 gcaacccgcc ttggttggaa ccttgctgca ggtttgaagg tgggattcat cctgatccta
      181 aagactcggt ccacctatct ccgtggaggg aatacagcag aagccaccag aagaaaaaag
      241 gaattcaatt ggtttttgta gagattcatg acaagaatcg cagaagccta gaagaggctg
      301 aagattacta gcctgaccta ttaatccaca catccgctga ccgttctctt caatcaggtg
      361 aagaaaggcc ctcttctttc tggccacaag gctcacacac ctataatcat gggtcgggcc
      421 cgggaaatgg gttggatggc agccggactc atgattggag ctggtgcctg ttactgcatg
      481 tacaaactga ccatgggaag aagtgagggg aacgagctgg aggacgagga ggaagatgaa
      541 tgggaagatg gacaggatct ggatgaagag gaagcagaca attggtttga tttcacagca
      601 atggctcgac cctggagtga ggatggggac tgggatgaac ctggggcccc aggtgggact
      661 gaggacagac ggtcaggtgg tggaaaggca aacagagcac acccaatcaa gcagcggcca
      721 ttcccttatg aacataaaaa catatggggt gaacagagct ttaaatcctt cacttgtatt
      781 cttgacctga acaagtgtgt ttccactcaa agaaagaaaa ggttcacgaa gaacataaat
      841 gctggctttt cccttagccc caatatcagt aaacatctgg ccagcctatc agtggttgga
      901 aacaggagtc ccacccccca tcccactgtg agggagaagg ctctgtttgt ccctgaaaac
      961 ccaaacagca gccttgaaaa tcagggccag attaagatgt ccattgatga agtgtgtcga
     1021 gagacactgt tgtgttgctg caagtctttt ctgcagcagg caggattaag tctgctaata
     1081 agcatgacag tcattaataa catgcttgcc aagtctgttt cagacctgaa gtttcctttg
     1141 ctatccaagg ggagtggatg tgcagaggtg cggggcttgg aagagctgat gagtttgtct
     1201 gaaaagccag tgctggtggg ggaagcactg gctgcccaaa tgctctcctc cttcatgtgc
     1261 ctctttacca gaagtgggag cagagagatg cttgtggaag ccatctcccc ttaagtggct
     1321 gtctcagaaa gaatgagact gaagccaccc agagcctgag cactttcctg agggcaaaga
     1381 ggctgcagtg agtgccacta aggatgcagc tttagccagt cagctcctcc ctgggtgaga
     1441 gttccttcca ctgtctaaat ggagggctac actctgactg gccaggcaag gctcttccag
     1501 agctgtgggc aacttctggg ttttgtagtt tgcaggtaaa gtgcattgta aattgctgcc
     1561 ctgcagcctt cttcatgtgg taaagggtaa ggggctcccc gtggccacta gctggggatg
     1621 actaacagca aatcacagca tagaggtgaa gggtaagggg atgcccgcgg ccactagctg
     1681 gggaaactaa cagcaagtca cagcatcaga gtgaatgttg ctgttgcctg tggtgatctc
     1741 cctgtctaag cgctgaacca cttagcagaa atgacaccca tatgagagct tgtgccaaat
     1801 acccttctgc tgctgctgct gctgctgctg ctgctgctgc tgcttagata gaagtagttc
     1861 ccttctcctc tgtcctacac tagctgatgg atggctagca tgttaatcaa gagatgcact
     1921 cccttcctgt ccactgtagt gactgaccct cttactcccc agtcccttac cctcaccccc
     1981 agtttgtatc ctcaataaac tgtgtgcttt gattggcaag acaattaaac aggg
//
