LOCUS       NM_133972               2215 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus armadillo repeat containing 6 (Armc6), mRNA.
ACCESSION   NM_133972
VERSION     NM_133972.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2215)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 2215)
  AUTHORS   Bedogni,F. and Hevner,R.F.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 2215)
  AUTHORS   Nagamachi,A., Matsui,H., Asou,H., Ozaki,Y., Aki,D., Kanai,A.,
            Takubo,K., Suda,T., Nakamura,T., Wolff,L., Honda,H. and Inaba,T.
  TITLE     Haploinsufficiency of SAMD9L, an endosome fusion facilitator,
            causes myeloid malignancies in mice mimicking human diseases with
            monosomy 7
  JOURNAL   Cancer Cell 24 (3), 305-317 (2013)
   PUBMED   24029230
REFERENCE   4  (bases 1 to 2215)
  AUTHORS   Sampson,N.D. and Hewitt,J.E.
  TITLE     SF4 and SFRS14, two related putative splicing factors on human
            chromosome 19p13.11
  JOURNAL   Gene 305 (1), 91-100 (2003)
   PUBMED   12594045
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC043070.1.
            
            On Aug 25, 2006 this sequence version replaced NM_133972.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC043070.1, AK081550.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164138, SAMN01164139
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2215
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="8"
                     /map="8 34.15 cM"
     gene            1..2215
                     /gene="Armc6"
                     /gene_synonym="2410153K17Rik"
                     /note="armadillo repeat containing 6"
                     /db_xref="GeneID:76813"
                     /db_xref="MGI:MGI:1924063"
     exon            1..313
                     /gene="Armc6"
                     /gene_synonym="2410153K17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            314..440
                     /gene="Armc6"
                     /gene_synonym="2410153K17Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             320..1726
                     /gene="Armc6"
                     /gene_synonym="2410153K17Rik"
                     /codon_start=1
                     /product="armadillo repeat-containing protein 6"
                     /protein_id="NP_598733.2"
                     /db_xref="CCDS:CCDS40371.1"
                     /db_xref="GeneID:76813"
                     /db_xref="MGI:MGI:1924063"
                     /translation="MASKRITQETFDAAVRENIEEFEMGTEEAIREAVEQFESQGVDL
                     SNIVKTIPKVSLDGLQEPTHSVLQALNDLQESLTGSRLQEVSAHLVRFCDQCKQQKAS
                     RYLAAQKGAYPILLAAWQLAATSNQGLLLQALNALAVLTDGQPDLLDAQGLHLLVATL
                     AQNAANTELTCCGIRCVRHVCLKHEQNRQDLVKAGVLPLLTAAITQHGQHADVVREAC
                     WALRVMTFDDDIRVPFGHAHEHAKMIVQENKGLKVLIEAARAFSDNPGVLSELCSTLS
                     RLAVRNEFCQEVIDLGGLGILVTLLADCNDHQDLVKQVLSALRAIAGNDDVKDAIVRA
                     GGTESIVAAMTRHLASPQVCEQSCAALCVLALRKPDNSRVIIEGGGALAALQAMKAHP
                     QEAGVQKQACMLIRNLVSRSQVFSKPILDLGAEELILQARAAHPDCEDVAKAALRDLG
                     CRVELRELWTGKKGDLAL"
     exon            441..523
                     /gene="Armc6"
                     /gene_synonym="2410153K17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            524..1097
                     /gene="Armc6"
                     /gene_synonym="2410153K17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1098..1243
                     /gene="Armc6"
                     /gene_synonym="2410153K17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1244..1375
                     /gene="Armc6"
                     /gene_synonym="2410153K17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1376..1513
                     /gene="Armc6"
                     /gene_synonym="2410153K17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1514..2199
                     /gene="Armc6"
                     /gene_synonym="2410153K17Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2182..2187
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Armc6"
                     /gene_synonym="2410153K17Rik"
                     /note="hexamer: AACAAA"
     polyA_site      2199
                     /gene="Armc6"
                     /gene_synonym="2410153K17Rik"
                     /note="major polyA site"
ORIGIN      
        1 cgctgctcac ttctcagggc cgagtctacc taggtgaaaa ctatctcttt tgaggggaag
       61 cgacacctag gagtagcatt gagagtactg caagagtctc aggcccacgc gtattctgtg
      121 gctcccttcg ctttacctgt gctcgcggtc gccctcgttg ccccggaaag gagcctctcg
      181 gctgaaggag ggacgccgag gcgaggcggc gcctctgcgc ttgcgcttat atggtggctc
      241 gaaggagcca aaggcaaagt ctcgggtgac agctgcgagc cccacccttt ccccacgtgg
      301 ctgcgtagac ccggcagtga tggcttccaa gcgcatcacc caggaaacct ttgatgctgc
      361 agtgcgggag aacattgagg agtttgagat gggcactgag gaggccattc gagaggctgt
      421 ggagcagttt gaatcacaag gggttgatct gagcaacatt gtgaagacaa taccgaaagt
      481 atcactggat ggccttcagg agcccacaca tagtgtcctt caggccctta acgatctgca
      541 ggagtccctg actggctctc ggctccagga ggtgtcagcc caccttgtcc gcttctgtga
      601 ccagtgcaag cagcagaagg ccagccgcta cctggcagcc cagaagggag cctacccaat
      661 cctcctggct gcctggcagc tggctgccac tagcaaccag ggtcttctgc tccaggctct
      721 caatgctctg gcagtgctga ctgatggcca gcctgacctc ctggatgccc agggcttgca
      781 tcttctcgtg gccacgctag cacagaatgc cgccaacact gaactcacgt gctgtgggat
      841 tcgctgcgtg cgccatgtct gcctaaagca cgaacagaat cggcaggact tggtgaaagc
      901 tggcgtgttg cccctgctca cagcggctat tacacagcat ggccagcacg ccgatgtggt
      961 cagggaggcc tgctgggcct tgcgggtcat gacctttgat gatgatatcc gagtgccctt
     1021 tggccatgcc catgagcacg ccaagatgat tgttcaggag aacaaaggcc tgaaggtgct
     1081 cattgaggct gccagagcat tctctgacaa cccaggggtc ctgagcgaac tctgcagcac
     1141 cctatcccgc ctggctgttc ggaatgaatt ctgccaggag gttatagacc tcggaggcct
     1201 tggcatcctt gtgaccctgc tggctgactg caatgaccac caggacctcg tgaagcaagt
     1261 tctcagtgcc ctgagggcta tcgcaggcaa cgacgacgta aaggatgcca ttgtccgggc
     1321 aggtggtacg gagtccattg tggctgctat gactcggcac ctggccagcc cccaggtgtg
     1381 tgagcaaagc tgcgccgcac tctgcgtcct agctcttcgc aagccagaca acagccgggt
     1441 cattattgag ggcggcgggg cgctggctgc tctgcaggcc atgaaggcgc atccacagga
     1501 ggctggtgtc cagaaacagg cttgcatgct gatccgaaac ctggtgtccc gcagccaagt
     1561 cttctccaag cccatcctgg acctgggggc agaggagctc attttgcaag cccgagctgc
     1621 tcacccagac tgtgaagatg tggctaaggc cgcattgcga gacctaggct gccgtgtgga
     1681 gcttcgtgaa ctgtggacag gaaagaaggg tgacctggct ctatgacctt agctcagaga
     1741 actctgactc cagaacgtgg gtggctatgg ggccctgcct ctctgtcctc cttcccatgc
     1801 tacccagagc acaagtgtgc tagcagggca gggggtgggg agggcagaag cagtgatgac
     1861 ctggtggccc accactgcca gtgtcccttc taccacagct gctctctgca gctttgggac
     1921 aaagggcaca tggaactgca gtgttctgtc tggagtttga ggcctccaca agctggtgtc
     1981 ccagcagggc cagcctgcaa tccgggcacc actccaagca gttgataacc ctgctccttg
     2041 ggcaggcccc ctgggtagag gtgcttcagc caaggctgat tccccaagat ccgcatgatg
     2101 ggaggaggga ggtgtctcct ccaaattgtc ctctgaactc tgtatgtgtg ctgtggtgca
     2161 cacatacatg ctagctaaat aaacaaacaa acaaataaaa aaaaaaaaaa aaaaa
//
