LOCUS       NM_026034               2099 bp    mRNA    linear   ROD 06-JUN-2024
DEFINITION  Mus musculus armadillo repeat containing 10 (Armc10), transcript
            variant 1, mRNA.
ACCESSION   NM_026034
VERSION     NM_026034.5
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2099)
  AUTHORS   Xie,L., Yin,Y., Jayakar,S., Kawaguchi,R., Wang,Q., Peterson,S.,
            Shi,C., Turnes,B.L., Zhang,Z., Oses-Prieto,J., Li,J.,
            Burlingame,A., Woolf,C.J., Geschwind,D., Rasband,M. and
            Benowitz,L.I.
  TITLE     The oncomodulin receptor ArmC10 enables axon regeneration in mice
            after nerve injury and neurite outgrowth in human iPSC-derived
            sensory neurons
  JOURNAL   Sci Transl Med 15 (708), eadg6241 (2023)
   PUBMED   37556559
  REMARK    GeneRIF: The oncomodulin receptor ArmC10 enables axon regeneration
            in mice after nerve injury and neurite outgrowth in human
            iPSC-derived sensory neurons.
REFERENCE   2  (bases 1 to 2099)
  AUTHORS   Lopez-Domenech,G., Serrat,R., Mirra,S., D'Aniello,S., Somorjai,I.,
            Abad,A., Vitureira,N., Garcia-Arumi,E., Alonso,M.T.,
            Rodriguez-Prados,M., Burgaya,F., Andreu,A.L., Garcia-Sancho,J.,
            Trullas,R., Garcia-Fernandez,J. and Soriano,E.
  TITLE     The Eutherian Armcx genes regulate mitochondrial trafficking in
            neurons and interact with Miro and Trak2
  JOURNAL   Nat Commun 3, 814 (2012)
   PUBMED   22569362
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 2099)
  AUTHORS   Bar,I., Lambert De Rouvroit,C., Royaux,I., Krizman,D.B.,
            Dernoncourt,C., Ruelle,D., Beckers,M.C. and Goffinet,A.M.
  TITLE     A YAC contig containing the reeler locus with preliminary
            characterization of candidate gene fragments
  JOURNAL   Genomics 26 (3), 543-549 (1995)
   PUBMED   7607678
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC161484.4.
            
            On May 18, 2018 this sequence version replaced NM_026034.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC058573.1, AK009821.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-230               AC161484.4         27537-27766         c
            231-379             AC161484.4         25004-25152         c
            380-514             AC161484.4         21893-22027         c
            515-691             AC161484.4         20220-20396         c
            692-763             AC161484.4         13148-13219         c
            764-2099            AC161484.4         11073-12408         c
FEATURES             Location/Qualifiers
     source          1..2099
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 9.97 cM"
     gene            1..2099
                     /gene="Armc10"
                     /gene_synonym="2810037C14Rik; Svh"
                     /note="armadillo repeat containing 10"
                     /db_xref="GeneID:67211"
                     /db_xref="MGI:MGI:1914461"
     exon            1..230
                     /gene="Armc10"
                     /gene_synonym="2810037C14Rik; Svh"
                     /inference="alignment:Splign:2.1.0"
     CDS             98..1018
                     /gene="Armc10"
                     /gene_synonym="2810037C14Rik; Svh"
                     /note="isoform 1 is encoded by transcript variant 1;
                     armadillo repeat-containing protein 10"
                     /codon_start=1
                     /product="armadillo repeat-containing protein 10 isoform
                     1"
                     /protein_id="NP_080310.1"
                     /db_xref="CCDS:CCDS19104.1"
                     /db_xref="GeneID:67211"
                     /db_xref="MGI:MGI:1914461"
                     /translation="MGGARDVGWVAAGLVLGAGACYCIYRLTRGPRRGGRRLRPSRSA
                     EDLTDGSYDDILNAEQLKKLLYLLESTDDPVITEKALVTLGNNAAFSTNQAIIRELGG
                     IPIVGNKINSLNQSIKEKALNALNNLSVNVENQTKIKIYVPQVCEDVFADPLNSAVQL
                     AGLRLLTNMTVTNDYQHLLSGSVAGLFHLLLLGNGSTKVQVLKLLLNLSENPAMTEGL
                     LSVQVDSSFLSLYDGQVANEILLRALTLFQNINNCLKVEGRLANQIPFAKGSLFFLLY
                     GEECAQKMRALACHHDVDVKEKALAIKPKF"
     exon            231..379
                     /gene="Armc10"
                     /gene_synonym="2810037C14Rik; Svh"
                     /inference="alignment:Splign:2.1.0"
     exon            380..514
                     /gene="Armc10"
                     /gene_synonym="2810037C14Rik; Svh"
                     /inference="alignment:Splign:2.1.0"
     exon            515..691
                     /gene="Armc10"
                     /gene_synonym="2810037C14Rik; Svh"
                     /inference="alignment:Splign:2.1.0"
     exon            692..763
                     /gene="Armc10"
                     /gene_synonym="2810037C14Rik; Svh"
                     /inference="alignment:Splign:2.1.0"
     exon            764..2099
                     /gene="Armc10"
                     /gene_synonym="2810037C14Rik; Svh"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1000..1005
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Armc10"
                     /gene_synonym="2810037C14Rik; Svh"
                     /note="hexamer: AATAAA"
     polyA_site      1018
                     /gene="Armc10"
                     /gene_synonym="2810037C14Rik; Svh"
                     /note="major polyA site"
     regulatory      1129..1134
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Armc10"
                     /gene_synonym="2810037C14Rik; Svh"
                     /note="hexamer: AATAAA"
     polyA_site      1158
                     /gene="Armc10"
                     /gene_synonym="2810037C14Rik; Svh"
                     /note="major polyA site"
     regulatory      1983..1988
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Armc10"
                     /gene_synonym="2810037C14Rik; Svh"
                     /note="hexamer: AATAAA"
     polyA_site      2013
                     /gene="Armc10"
                     /gene_synonym="2810037C14Rik; Svh"
                     /note="major polyA site"
     regulatory      2075..2080
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Armc10"
                     /gene_synonym="2810037C14Rik; Svh"
                     /note="hexamer: AATACA"
     polyA_site      2094
                     /gene="Armc10"
                     /gene_synonym="2810037C14Rik; Svh"
                     /note="major polyA site"
ORIGIN      
        1 gctccaaccc catttccttt ctctgggctg gttctggccc agctgcacct gcgtgtggcc
       61 ctggctcctc ggctccctgc agctccgagg cagcagcatg ggtggcgcgc gggacgtggg
      121 ctgggtggca gcagggctgg tcctgggcgc cggcgcctgc tactgtatct accggctgac
      181 tcggggaccg cggcgaggcg gtcgccgact gcgcccttcg cgatccgcag aagacctaac
      241 cgatggctcc tatgacgata tcttaaatgc agagcagctt aagaaacttc tgtatctgct
      301 ggagtcaacc gacgatcctg tcattactga aaaggccttg gtcaccttgg gaaataatgc
      361 agccttctcc actaaccagg ccattattcg tgagttgggt ggtatcccaa ttgttggaaa
      421 caaaatcaac tccctgaacc aaagtattaa agagaaagct ttaaatgcac tgaataacct
      481 gagtgtgaat gttgaaaatc aaactaagat aaagatatac gtccctcaag tctgtgagga
      541 cgtctttgct gaccccctga actctgcggt gcagctggcc ggactgaggc tgctgacaaa
      601 catgacggtc accaacgact atcagcacct gctcagcggc tccgtcgctg gcctgttcca
      661 cctgctgctg ctgggaaacg gaagcaccaa ggtccaggtt ttgaagctgc ttttgaattt
      721 gtctgagaat ccagccatga cagaaggact actgagtgtc caagtggatt cttcattcct
      781 ttccctttat gacggccaag tagcaaatga gattcttctt cgggctctta cactgtttca
      841 gaatataaac aactgcctca aagtggaagg ccggttagct aatcagattc cttttgctaa
      901 agggtcattg ttttttctgt tatacggaga agaatgtgcc cagaaaatga gagctttagc
      961 ctgtcatcat gatgtggatg tgaaagagaa agctttagca ataaagccga aattctgatc
     1021 ggttgctcct atttttatca aagactcaaa cagtaaggca gtcttaagtc agcacacggg
     1081 agcgtttgcc tgcctttaaa aggggtcttt cagccgatgg agttaaacaa taaaagtgag
     1141 tgagcagctc taatccaaca cgatgttcaa aattttagat tttggagtag ttcagatttg
     1201 gggtttgggg attgagtaga gtctggaacc ttccgaggat gtggatcatt tacggggcaa
     1261 acgtttggtt atgatcgtgg acagactggc catgctcttc aggactattt gaaggattct
     1321 agtgctagtg aatgaatatg aggggctgta ctgaagatac ttgctgaggt atttaatggt
     1381 ttcctgacac gaactgagtg gcctgtctct gtacaatcct aactcctggg agcatttgca
     1441 gttgctcatg agacagcgtt aagtgctgag ttgaagtctg ttactgccac agcaaggacc
     1501 ttgtgcctca aaccagtgaa tactgcaagc tcgagtccac caccaaccct gccatgctgc
     1561 ttgcaagtct gagctcatcg tgagacactg cctgcagcat ttctgatcag taggactgta
     1621 ctcccattta catggaaagc gttttcttac tgcttacccc cttgtgtaag atactgcaga
     1681 gcactccaag cttccaccca caggcagaca gccctttaaa aaagagtgtc ctgataagtc
     1741 cagatggata catggagaaa catacccatg agatggctgc tttgaaagca tgctgggaag
     1801 caatgtatta gggtcccgtg tctttttttt ctctcagtaa tgataaatac acttatacat
     1861 ggacagaaca tttctagaac gattcagaaa acttctggga ctgggactag ggtacataga
     1921 tttctttgtg ttcctgtttc taccgtttgg atttgtactg agcataaatt gtataatttt
     1981 ttaataaaaa ggaaaaatgc aaggtgtaca taatttcttc ccccactgac attattttac
     2041 taaatttcat cacatttttc ttaagtaaaa ttacaataca tacatttttt aaaattttt
//
