LOCUS       NM_028840               3719 bp    mRNA    linear   ROD 05-JUN-2024
DEFINITION  Mus musculus armadillo repeat containing 1 (Armc1), transcript
            variant 1, mRNA.
ACCESSION   NM_028840 XM_909822
VERSION     NM_028840.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3719)
  AUTHORS   Tewari,R., Bailes,E., Bunting,K.A. and Coates,J.C.
  TITLE     Armadillo-repeat protein functions: questions for little creatures
  JOURNAL   Trends Cell Biol 20 (8), 470-481 (2010)
   PUBMED   20688255
  REMARK    Review article
REFERENCE   2  (bases 1 to 3719)
  AUTHORS   Chang,J.Y. and Han,J.K.
  TITLE     Cloning and expression of a novel armadillo motif containing gene
            in Xenopus
  JOURNAL   Mech Dev 119 Suppl 1, S83-S85 (2002)
   PUBMED   14516665
REFERENCE   3  (bases 1 to 3719)
  AUTHORS   Hatzfeld,M.
  TITLE     The armadillo family of structural proteins
  JOURNAL   Int Rev Cytol 186, 179-224 (1999)
   PUBMED   9770300
  REMARK    Review article
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY165551.1, AK082783.1, AC127283.2, AK034483.1 and BF464987.1.
            
            On Nov 4, 2017 this sequence version replaced NM_028840.2.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC021451.1, AK167233.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164137, SAMN01164138
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-16                BY165551.1         2-17
            17-1191             AK082783.1         2-1176
            1192-1684           AC127283.2         46708-47200         c
            1685-3692           AK034483.1         1064-3071
            3693-3719           BF464987.1         1-27                c
FEATURES             Location/Qualifiers
     source          1..3719
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="3"
                     /map="3 5.36 cM"
     gene            1..3719
                     /gene="Armc1"
                     /gene_synonym="2310016N05Rik; 2900046P06Rik;
                     3110009G21Rik; Arcp; C330014L16Rik"
                     /note="armadillo repeat containing 1"
                     /db_xref="GeneID:74252"
                     /db_xref="MGI:MGI:1921502"
     exon            1..186
                     /gene="Armc1"
                     /gene_synonym="2310016N05Rik; 2900046P06Rik;
                     3110009G21Rik; Arcp; C330014L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            187..407
                     /gene="Armc1"
                     /gene_synonym="2310016N05Rik; 2900046P06Rik;
                     3110009G21Rik; Arcp; C330014L16Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             225..1073
                     /gene="Armc1"
                     /gene_synonym="2310016N05Rik; 2900046P06Rik;
                     3110009G21Rik; Arcp; C330014L16Rik"
                     /note="isoform 1 is encoded by transcript variant 1;
                     armadillo repeat containing protein"
                     /codon_start=1
                     /product="armadillo repeat-containing protein 1 isoform 1"
                     /protein_id="NP_083116.1"
                     /db_xref="CCDS:CCDS17255.1"
                     /db_xref="GeneID:74252"
                     /db_xref="MGI:MGI:1921502"
                     /translation="MNSSSSTMNEEPDALSVVNQLRDLAADPLNRRAIVQDQGCLPGL
                     ILFMDHPNPPVVHSALLALRYLAECRANREKMKGELGMMLSLQNVIQKTTTPGETKLL
                     ASEIYDILQSSNLADGDSFNEMNSRRRKAQFFLGTTNKRAKTVVLHIDGLDDTSRRNL
                     CEEALLKIKGVISFTFQMAVQRCVVRIRSDLKAEALASAIASTKVMKAQQVVKSESGE
                     EMLVPFQDAPVEVEENTELPDYLPEDESPTKEQDKAVSRVGSHPEGGASWLSTAANFL
                     SRSFYW"
     exon            408..499
                     /gene="Armc1"
                     /gene_synonym="2310016N05Rik; 2900046P06Rik;
                     3110009G21Rik; Arcp; C330014L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            500..689
                     /gene="Armc1"
                     /gene_synonym="2310016N05Rik; 2900046P06Rik;
                     3110009G21Rik; Arcp; C330014L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            690..806
                     /gene="Armc1"
                     /gene_synonym="2310016N05Rik; 2900046P06Rik;
                     3110009G21Rik; Arcp; C330014L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            807..881
                     /gene="Armc1"
                     /gene_synonym="2310016N05Rik; 2900046P06Rik;
                     3110009G21Rik; Arcp; C330014L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            882..3703
                     /gene="Armc1"
                     /gene_synonym="2310016N05Rik; 2900046P06Rik;
                     3110009G21Rik; Arcp; C330014L16Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2937..2942
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Armc1"
                     /gene_synonym="2310016N05Rik; 2900046P06Rik;
                     3110009G21Rik; Arcp; C330014L16Rik"
                     /note="hexamer: AATAAA"
     regulatory      2950..2955
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Armc1"
                     /gene_synonym="2310016N05Rik; 2900046P06Rik;
                     3110009G21Rik; Arcp; C330014L16Rik"
                     /note="hexamer: AATGAA"
     polyA_site      2961
                     /gene="Armc1"
                     /gene_synonym="2310016N05Rik; 2900046P06Rik;
                     3110009G21Rik; Arcp; C330014L16Rik"
                     /note="major polyA site"
     polyA_site      2971
                     /gene="Armc1"
                     /gene_synonym="2310016N05Rik; 2900046P06Rik;
                     3110009G21Rik; Arcp; C330014L16Rik"
     regulatory      3676..3681
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Armc1"
                     /gene_synonym="2310016N05Rik; 2900046P06Rik;
                     3110009G21Rik; Arcp; C330014L16Rik"
                     /note="hexamer: AATAAA"
     polyA_site      3700
                     /gene="Armc1"
                     /gene_synonym="2310016N05Rik; 2900046P06Rik;
                     3110009G21Rik; Arcp; C330014L16Rik"
ORIGIN      
        1 atgggataat aaagccagca gaggtgacag ggtcaccgcg gagcctgcag ctcctccgcc
       61 gccagcgact cagccctgtg gttctttgag tcgggccgtg gctcggggtc ttcgccgccc
      121 gttgtccgcc gtggtgggtg cggctctgat gctgcggcag gctccggacg cccggagctc
      181 tggaggaatt taagaagctt ttattcatgt gcatgtcata gaagatgaat tcatcctctt
      241 ctactatgaa tgaagaacct gatgctctat cagtagttaa ccagctacgg gatttagcag
      301 cagatccact aaatagaaga gccatcgtcc aggatcaggg atgtttgcct ggccttattt
      361 tatttatgga ccatccaaac cctcctgtcg ttcactcagc tttgcttgcg ctacgctact
      421 tggctgaatg ccgtgcgaat agagaaaaga tgaagggaga gctggggatg atgctgagct
      481 tgcagaatgt catccagaag actacaactc caggagaaac aaaacttctg gcctcagaaa
      541 tctatgacat ccttcaatcc tccaatttgg ctgatggtga tagttttaat gaaatgaatt
      601 cgcgtagaag gaaagctcag ttttttttgg gaactacaaa caaacgggcc aaaacagtag
      661 ttttgcacat agatggtctc gatgatacgt ctcgacgaaa tctatgtgaa gaggccttgt
      721 taaaaattaa aggtgtcatt agctttactt ttcaaatggc tgttcaaaga tgcgtggtgc
      781 ggatccgttc agacttgaag gcagaggctc tggcgtcagc aatagcatca accaaggtca
      841 tgaaagctca gcaagttgtg aagagcgaga gtggagaaga gatgctggtc ccttttcagg
      901 atgcccctgt ggaagtggaa gagaacacag agctacctga ctacctgcct gaggatgaga
      961 gtcccacaaa ggagcaggac aaggcagtgt cccgggttgg atcgcaccct gaaggtggag
     1021 ccagctggtt gagcacagca gcaaactttt tatccagatc attttactgg tgacttcaac
     1081 ttcagtttgg ggctcaagga ctgtgcaaac caacaggggg ccagctttcc attgttgtgg
     1141 tgaactgtca agtgcaattt gcaataaatt atcatggaaa gtttctagat tacatgacta
     1201 tgtatgctgc attttacatc ttattggaca ttttccgcac aagacagagg ctacaggtca
     1261 agtttgttta tgaaggtatt ttggtattgt tttcctttgc ttaattgcct cacattttgt
     1321 tctgaaaaac atgggtccac tgttaaaacc gaatgtatgt gtagctttat tctgtttcac
     1381 aggcgcatgt gattggaaaa ctcattttct cctccagcct caggagactt ctaaaaagtt
     1441 ttgcgtagct caagttgtgc atgaattacc gaatatatta tttttcagct tttcttcatg
     1501 aacgatattt gacatgtgct ttggtaccct tctctgaaag ttgaaaacct acctacttag
     1561 tcccttctgt gcctttttta ttttgccaac catgttttat ggaaaagaca ttagcaatta
     1621 cattttgcaa atggaattat gttcatttga acatagaagt acctaaaaag aaaaaaaaaa
     1681 aacctctaca aaaagctgta cagtcatact tgctgtaatt ttaataagat tactgtaggc
     1741 cagttaaaac acagggatat ttgctgtaaa gtgcttttgg aaggatttga atgtggccaa
     1801 gcctggctct gttgactcct gctcaccagt tagagtggct tttaagaatt aagtccactg
     1861 tgatgtttga gcagcagatg gtctcttggc cttactctgt ggtgacactg tatcctgcta
     1921 gagaaaatta atagtttaaa caactgacaa acttgaaaag gaaattggat gcctagaatg
     1981 ccgcagtgcc accttggttg gtctgatgtc agacatcaac acatacccat cccagagatg
     2041 ctgggcttat tgcctttttg tggttattaa gaaagggctg cagtcagttt gactaaaacg
     2101 ggatccacgt tattgcttag aaaggaagca agccagcagt gatcacttat tcttattctt
     2161 catatctatc cagaaaactg acttcagtga aggtaagata tatacagaca tacacttgtg
     2221 tttttcttta agactgaagt acacgtatgc gatgctttct taagattcta acatatttga
     2281 caactaatat ttctttttag aagtcagcta aatctattta aaggcaacat cattaaaact
     2341 aacaggaaga aactgaaatg catctttacc aggtagagct gctgttttgc tacttggaga
     2401 aagtgaaggg aagttggacc ctggagggtt tccttacatc tttgctgtct ctctcttaga
     2461 gatcattgaa gccatccagt gttgctgagg agaaataacc gtacaatcct atggcccatg
     2521 agaccattaa gtttattaac atttggcttt ctggaaggag ggtgttgaag gcttttagag
     2581 cattttcccc acgtctggtc tctgattcaa gtgctatgta caagcagaaa gcagacattt
     2641 tcagggcaca tctctaagct gtgtaactgc ttgctgccag aaccagacgt gttgaagaca
     2701 aaacaacaaa tcacctcctt tctagatcca ttaaagcaaa gtttactttc tgtttcaaca
     2761 ggtttttatt ttattttgca ttgtcacaca tttatttaaa aactgtagcc cttttggtag
     2821 tgatggtcca ggtcggttgg tatttcagac tgaagtttgt gtgtgtctag gtgttcaagg
     2881 actctcagag atctcaaggc aactataatg gcagtttttg aaatatattg taagataata
     2941 aaagataaca atgaaaatca agcagttatt gtatttttaa atttttattt atcaacttcc
     3001 cgcccatcca tccatccatc catccatcct ccatgtctct gtgtgtacat gcctggggga
     3061 gtcaggagac tattaggtca cgggagctgg agttacaggc agttgtgagc tgtctgatat
     3121 ggttctggga gttgagctca gtgctctgca agaataattc atgttcttaa ccactgagct
     3181 atttctctag ccttgggata ttgtagtata aagattgata cgtacgtacg tgtgtgtgtg
     3241 tgtgtgtgtg agatgctggg tatccatcca gtgactcagg attcttttta agcttgtttg
     3301 aaattatcta tttatacatt tagagacaag gtcttactat ctagtccaag ctggcctgaa
     3361 ccttttatgt ggcccacctt aaccttgaac tctagattct cttgcttaca tcctgaatgg
     3421 caggtatcat catgccaagc tctttggcag tttgcacaca taatgtatgg cacatagtct
     3481 tagttctata gttgcaagag tcaggggaag tacctcacct gttactgtgt aattatgtgt
     3541 agacccctga gctggacaaa ccagacctgc actcttgtca tgtttttggg tttggttttc
     3601 cagagcctcc tgtagaagct tgtgttccaa tctcagatct acccatattc tgattttaaa
     3661 gaattgttac aggagaataa aaattgcttc ttataacttg caaaaaaaaa aaaaaaaaa
//
