LOCUS       NM_144509               1182 bp    mRNA    linear   ROD 06-APR-2024
DEFINITION  Mus musculus ADP-ribosylation factor-like 6 interacting protein 4
            (Arl6ip4), mRNA.
ACCESSION   NM_144509 XM_917000 XM_924601 XM_924605 XM_924609 XM_924612
VERSION     NM_144509.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1182)
  AUTHORS   Bedogni,F. and Hevner,R.F.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1182)
  AUTHORS   Jerome-Majewska,L.A., Achkar,T., Luo,L., Lupu,F. and Lacy,E.
  TITLE     The trafficking protein Tmed2/p24beta(1) is required for
            morphogenesis of the mouse embryo and placenta
  JOURNAL   Dev Biol 341 (1), 154-166 (2010)
   PUBMED   20178780
REFERENCE   3  (bases 1 to 1182)
  AUTHORS   Kim,S., Zhang,S., Choi,K.H., Reister,R., Do,C., Baykiz,A.F. and
            Gershenfeld,H.K.
  TITLE     An E3 ubiquitin ligase, Really Interesting New Gene (RING) Finger
            41, is a candidate gene for anxiety-like behavior and
            beta-carboline-induced seizures
  JOURNAL   Biol Psychiatry 65 (5), 425-431 (2009)
   PUBMED   18986647
REFERENCE   4  (bases 1 to 1182)
  AUTHORS   Sasahara,K., Yamaoka,T., Moritani,M., Tanaka,M., Iwahana,H.,
            Yoshimoto,K., Miyagawa,J., Kuroda,Y. and Itakura,M.
  TITLE     Molecular cloning and expression analysis of a putative nuclear
            protein, SR-25
  JOURNAL   Biochem Biophys Res Commun 269 (2), 444-450 (2000)
   PUBMED   10708573
REFERENCE   5  (bases 1 to 1182)
  AUTHORS   Ingley,E., Williams,J.H., Walker,C.E., Tsai,S., Colley,S.,
            Sayer,M.S., Tilbrook,P.A., Sarna,M., Beaumont,J.G. and Klinken,S.P.
  TITLE     A novel ADP-ribosylation like factor (ARL-6), interacts with the
            protein-conducting channel SEC61beta subunit
  JOURNAL   FEBS Lett 459 (1), 69-74 (1999)
   PUBMED   10508919
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AC113474.18.
            
            On Mar 21, 2007 this sequence version replaced NM_144509.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AB035383.1, BC063748.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-504               AC113474.18        133431-133934
            505-783             AC113474.18        134238-134516
            784-901             AC113474.18        134594-134711
            902-971             AC113474.18        135153-135222
            972-1182            AC113474.18        135308-135518
FEATURES             Location/Qualifiers
     source          1..1182
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 63.39 cM"
     gene            1..1182
                     /gene="Arl6ip4"
                     /gene_synonym="Aip-4; Srp25"
                     /note="ADP-ribosylation factor-like 6 interacting protein
                     4"
                     /db_xref="GeneID:65105"
                     /db_xref="MGI:MGI:1929500"
     exon            1..504
                     /gene="Arl6ip4"
                     /gene_synonym="Aip-4; Srp25"
                     /inference="alignment:Splign:2.1.0"
     CDS             339..1028
                     /gene="Arl6ip4"
                     /gene_synonym="Aip-4; Srp25"
                     /note="SRp25 nuclear protein; ARL-6-interacting protein 4;
                     ADP-ribosylation-like factor 6 interacting protein 4;
                     splicing factor SRrp37"
                     /codon_start=1
                     /product="ADP-ribosylation factor-like protein
                     6-interacting protein 4"
                     /protein_id="NP_653092.1"
                     /db_xref="CCDS:CCDS19673.1"
                     /db_xref="GeneID:65105"
                     /db_xref="MGI:MGI:1929500"
                     /translation="MAHVGSRKRSRSRSRSRSGRRGSEKRSKRSSKDASRNCSASRSQ
                     GHKAGSASGVEERSKHKAQRTSRSSSTSSSSSSSSSASSSSSSDGRKKRAKHKEKKRK
                     KKKKKRKKKLKKRVKEKAVAVHQAEALPGPSLDQWHRSAGEDNDGPVLTDEQKSRIQA
                     MKPMTKEEWDARQSVIRKVVDPETGRTRLIKGDGEVLEEIVTKERHREINKQATRGDG
                     LAFQMRTGLLP"
     exon            505..783
                     /gene="Arl6ip4"
                     /gene_synonym="Aip-4; Srp25"
                     /inference="alignment:Splign:2.1.0"
     exon            784..901
                     /gene="Arl6ip4"
                     /gene_synonym="Aip-4; Srp25"
                     /inference="alignment:Splign:2.1.0"
     exon            902..971
                     /gene="Arl6ip4"
                     /gene_synonym="Aip-4; Srp25"
                     /inference="alignment:Splign:2.1.0"
     exon            972..1182
                     /gene="Arl6ip4"
                     /gene_synonym="Aip-4; Srp25"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cctcccgcga aaggcctgct gtgggctaat ggtggatgtg gggacccagc agcctcggga
       61 cgcgtctccg gcgacccacg cggtcctatt gcagctgagg aaagctgcag cgttccctcc
      121 ctgggccacc aagtccagtg cgcaggcttg agggcggggc gggagtcgga ggaggtgctg
      181 ggatcgctaa gccccggggc tcgctccggc aggaatgggc actgggcgcc ccgaggatcg
      241 ggtcccgttg gcgctgcgtt tggattcgcc tccgaggaca cgctcacgaa gagtcgcagg
      301 ctaagcgctt tccttccggt ccctagcccg cctcgctgat ggctcacgtt ggctctcgaa
      361 agcgctcgag aagtcgcagt cggtcccgta gtggtcggcg agggtcagaa aagcgaagta
      421 agaggagtag caaggatgcc tcgaggaact gttcagcctc cagatcccag ggccacaagg
      481 ctggcagcgc ctccggggtt gaggagagaa gcaagcacaa ggcccagagg acatcgcgat
      541 ccagttcaac ctcctcctct tccagttctt ctagctccgc ctcgtcctca tcctccagtg
      601 atggccggaa gaagcgagcg aagcacaagg agaagaagag gaagaagaag aagaagaaac
      661 ggaagaagaa gttgaagaag agagtcaagg agaaggcagt ggcggtgcac caggccgagg
      721 ctctgcccgg cccctcactg gatcagtggc acagatcagc tggggaggac aatgatggcc
      781 cagtcctgac agatgagcag aagtctcgta tccaggccat gaaacccatg acaaaggagg
      841 agtgggatgc ccgacagagc gttattcgaa aggtggtgga cccagagaca ggacgcacaa
      901 ggctcatcaa gggagacggc gaggttttag aggaaatcgt aaccaaagaa cgacacagag
      961 agatcaacaa gcaagccacc cgaggggatg ggctggcctt ccagatgcga acaggcctac
     1021 ttccctgagg gctcagccat cccaggtttg tgaactgctg ttggtgactt ggagactaat
     1081 aggtccaggt gcctttccta cagcccagca tcctcttggg tgcagtggat tggacagcaa
     1141 attggacagc agagtgtcac tattaaatga tcttggtcac ag
//
