LOCUS       NM_197995               2023 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus ADP-ribosylation factor-like 16 (Arl16), mRNA.
ACCESSION   NM_197995 XM_126711
VERSION     NM_197995.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2023)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 2023)
  AUTHORS   Dewees,S.I., Vargova,R., Hardin,K.R., Turn,R.E., Devi,S.,
            Linnert,J., Wolfrum,U., Caspary,T., Elias,M. and Kahn,R.A.
  TITLE     Phylogenetic profiling and cellular analyses of ARL16 reveal roles
            in traffic of IFT140 and INPP5E
  JOURNAL   Mol Biol Cell 33 (4), ar33 (2022)
   PUBMED   35196065
  REMARK    GeneRIF: Phylogenetic profiling and cellular analyses of ARL16
            reveal roles in traffic of IFT140 and INPP5E.
REFERENCE   3  (bases 1 to 2023)
  AUTHORS   Yang,Y.K., Qu,H., Gao,D., Di,W., Chen,H.W., Guo,X., Zhai,Z.H. and
            Chen,D.Y.
  TITLE     ARF-like protein 16 (ARL16) inhibits RIG-I by binding with its
            C-terminal domain in a GTP-dependent manner
  JOURNAL   J Biol Chem 286 (12), 10568-10580 (2011)
   PUBMED   21233210
  REMARK    GeneRIF: ARF-like protein 16 (ARL16) inhibits RIG-I by binding with
            its C-terminal domain in a GTP-dependent manner
REFERENCE   4  (bases 1 to 2023)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BF472168.1, AK038349.1 and AK140077.1.
            
            On Apr 6, 2006 this sequence version replaced NM_197995.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK038349.1, BC139260.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-129               BF472168.1         8-136
            130-442             AK038349.1         2-314
            443-527             AK140077.1         447-531
            528-1346            AK038349.1         400-1218
            1347-2023           AK140077.1         1513-2189
FEATURES             Location/Qualifiers
     source          1..2023
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 84.16 cM"
     gene            1..2023
                     /gene="Arl16"
                     /gene_synonym="2600005N12Rik"
                     /note="ADP-ribosylation factor-like 16"
                     /db_xref="GeneID:70317"
                     /db_xref="MGI:MGI:1917567"
     exon            1..238
                     /gene="Arl16"
                     /gene_synonym="2600005N12Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             178..699
                     /gene="Arl16"
                     /gene_synonym="2600005N12Rik"
                     /codon_start=1
                     /product="ADP-ribosylation factor-like protein 16"
                     /protein_id="NP_932112.2"
                     /db_xref="CCDS:CCDS36390.1"
                     /db_xref="GeneID:70317"
                     /db_xref="MGI:MGI:1917567"
                     /translation="MCLLLGAAGVGKTLLVKRLQKLSSGDGKGDLGEPPPTRPTVGTN
                     LTDIVAHRKITIRELGGCMSPIWSSYYGNCHSLLFMMDASNPTQLSASCMQLLGLLSA
                     EELEKASVLILFNKIDLPCYMTMEEMKSLMRLPDIIACAKQNITAVEISARNGTGLAT
                     VLLWLQNQHRHSS"
     exon            239..297
                     /gene="Arl16"
                     /gene_synonym="2600005N12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            298..411
                     /gene="Arl16"
                     /gene_synonym="2600005N12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            412..527
                     /gene="Arl16"
                     /gene_synonym="2600005N12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            528..2023
                     /gene="Arl16"
                     /gene_synonym="2600005N12Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      830..835
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Arl16"
                     /gene_synonym="2600005N12Rik"
                     /note="hexamer: AACAAG"
     polyA_site      849
                     /gene="Arl16"
                     /gene_synonym="2600005N12Rik"
                     /note="major polyA site"
ORIGIN      
        1 ctgctccatg gcgagacttg cgcttacaca ctgactctga gcgtccattg gaccgctcag
       61 tccattggga ctaaccaatg agcagcctgg acgagcggtc tatccaatga aagctaagcg
      121 gaggcgggcc tcattgcgtg gtagctcgga ggtacaagcg cgttatccga ggaagggatg
      181 tgtctcctgc ttggagctgc tggggtcggg aagaccctgc tggtgaaacg ccttcagaag
      241 ctgagctccg gagatggcaa aggcgacctg ggagagcccc caccgacgcg gcccacggtg
      301 ggcaccaacc ttacagacat tgtggcccac aggaagatca ccatccgaga gctcggggga
      361 tgcatgagcc ccatctggtc cagttactat ggaaactgcc attcgctctt gttcatgatg
      421 gatgcttcta accccaccca gctctctgca tcctgcatgc agctcctggg tctcctttct
      481 gcagaagaac ttgaaaaagc ctccgtcctc atactcttca ataaaattga cctaccctgt
      541 tacatgacca tggaggaaat gaagtcattg atgaggcttc cagacatcat tgcttgtgcc
      601 aagcaaaaca tcaccgcagt agaaataagt gccaggaatg gcactggctt ggcaacagta
      661 ttgctctggc tccagaatca acacaggcac agcagttgac agcaagatgg agaagtatgg
      721 ctgaccccac ccagtgccta ggaggcaaat gcatgagagc ctgaggtgtt tgataggagc
      781 aggccaccca gtgtatctgc aagtgatggg ggctgtgctg tgaccagtaa acaagcatac
      841 acttacaaac accactgtca tctcacttct gaacaatggt cccaagacag aacaaactgc
      901 aggtgtcttc acgtctccca ccaagaagtt ggacccactg agggctttgg actgcacgga
      961 gcccaggtca tttttatagt acagactctg cctttctgag ttcctatatc ctgaccatgt
     1021 tgcccagaaa aaaatataaa gttaatgaag aattgggaag tgggccgggc atggtggcac
     1081 atgcctttaa tcccagtact cgggaggcag aggcaggtgg atttcagagt tcgaggccag
     1141 cctcgtctac aaagtgagtt ccaggacagc cagagctaca cagagaaacc ctgtctcgaa
     1201 aaccaaaaaa aaatttggga agttggggag gggtgagatg gctcagtggg taagagcact
     1261 ggcttctctt cagaagatcc tgaattcaaa tcccagcaac cgcatggtgg cccacagccc
     1321 tctgtaatga gagctgactc actcttctgg agtgtctaaa gacagctaca gtagtgagca
     1381 gaggttgagt tcaattccca gcaaccacat gatggctcac aatcatctat acagctacag
     1441 tgtactcata tacataaaat ataatttaaa aaaaaaaaaa agaattgtct tggcctggag
     1501 agatggcgca gcacttgaga gctgtctgct tctagaggta ctgaattgta ctcccagcaa
     1561 ccatatggtg gccatactga gatctgatgt gctcttctgg cttgcaggtg tacatgcaga
     1621 tacagcactc atatacggaa aattaatttt aaagaaaaaa tagagttgtg tctcaaatgg
     1681 gaaaaagtag gcaggatgtg gtggcacgtg cctgtagctt gagctactcg agagacaaag
     1741 gcaaaaggat catcttaagc tcaagagctg agcttttcat agagatgggg gtgagcggga
     1801 cgggtgtggt agagcatttc tctaatccca gcacttagaa gtcaggcagg agaatctcaa
     1861 gatctggctg gcacagtgag aaactgtctc aaaaaaaaaa aaaaaaaaaa cccaaaaaac
     1921 aaaaagccaa aactctgggg gagggggagt gtggttgtga cctcaccaga aacaagaatg
     1981 ttctcattga tggatttatt caataaactt ttatttctca tgt
//
