LOCUS       NM_001025102            3308 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus ADP-ribosylation factor-like 14 effector protein
            (Arl14ep), transcript variant 1, mRNA.
ACCESSION   NM_001025102
VERSION     NM_001025102.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3308)
  AUTHORS   Sansom,S.N., Griffiths,D.S., Faedo,A., Kleinjan,D.J., Ruan,Y.,
            Smith,J., van Heyningen,V., Rubenstein,J.L. and Livesey,F.J.
  TITLE     The level of the transcription factor Pax6 is essential for
            controlling the balance between neural stem cell self-renewal and
            neurogenesis
  JOURNAL   PLoS Genet 5 (6), e1000511 (2009)
   PUBMED   19521500
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BX649348.8 and BX890640.4.
            
            On May 1, 2018 this sequence version replaced NM_001025102.1.
            
            Transcript Variant: This variant (1) differs in the 5' UTR compared
            to variant 3. All four variants encode the same protein.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC054106.2, AK134965.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164135 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-126               BX649348.8         8209-8334           c
            127-613             BX649348.8         3009-3495           c
            614-741             BX890640.4         52009-52136         c
            742-966             BX890640.4         50331-50555         c
            967-3308            BX890640.4         47438-49779         c
FEATURES             Location/Qualifiers
     source          1..3308
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 55.97 cM"
     gene            1..3308
                     /gene="Arl14ep"
                     /gene_synonym="2700007P21Rik; 4930448O08Rik; ARF7EP"
                     /note="ADP-ribosylation factor-like 14 effector protein"
                     /db_xref="GeneID:212772"
                     /db_xref="MGI:MGI:1926020"
     exon            1..126
                     /gene="Arl14ep"
                     /gene_synonym="2700007P21Rik; 4930448O08Rik; ARF7EP"
                     /inference="alignment:Splign:2.1.0"
     exon            127..613
                     /gene="Arl14ep"
                     /gene_synonym="2700007P21Rik; 4930448O08Rik; ARF7EP"
                     /inference="alignment:Splign:2.1.0"
     exon            614..741
                     /gene="Arl14ep"
                     /gene_synonym="2700007P21Rik; 4930448O08Rik; ARF7EP"
                     /inference="alignment:Splign:2.1.0"
     exon            742..966
                     /gene="Arl14ep"
                     /gene_synonym="2700007P21Rik; 4930448O08Rik; ARF7EP"
                     /inference="alignment:Splign:2.1.0"
     exon            967..3308
                     /gene="Arl14ep"
                     /gene_synonym="2700007P21Rik; 4930448O08Rik; ARF7EP"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3196..3201
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Arl14ep"
                     /gene_synonym="2700007P21Rik; 4930448O08Rik; ARF7EP"
                     /note="hexamer: AATAAA"
     polyA_site      3221
                     /gene="Arl14ep"
                     /gene_synonym="2700007P21Rik; 4930448O08Rik; ARF7EP"
                     /note="major polyA site"
ORIGIN      
        1 ggtttctgcg cggggccggc ggtggtgtgg aaagccgagc ttggcctgtg cagagacggt
       61 gcttccggag cccagcggag acccgtggca gctcaggtgg accgggccgg gtcgggccgt
      121 agggctgttg acctatcaaa gagatttcta gacaaaataa aagaggggga aattgataga
      181 atcaaggacg atggatccgt gttcagttgg agtccagctt cgtaccacac acgactgcca
      241 taaaaccttc tatactcggc acacaggttt caagacattg aaagaattgt catcaaatga
      301 catgctttta cttcagctta gaactggaat gacactttct gggaataata caatttgtct
      361 ccatcacgta aaaatttata ttgacagatt tgaagatttg cagaagtcgt gttgtgaccc
      421 atttaacata cacaagaagc tagccaaaaa gaacctgcac gtcattgact tagatgatgc
      481 cacttttctg agcgccaagt ttggaagaca gcttgtacct ggttggaagc tttgccccaa
      541 atgtacccag atcatcaatg gaagtgtgga cgttgattca gatgaccgcc agagacggaa
      601 acccgactca gatggaagga ctgctaaagc tctgaggtca ctacagttta caaacccagg
      661 gaagcaaact gaatttgctc cagaaggcgg taagagggag aaaagaaagc tcaccaaagc
      721 cacaagcgct gcttctgaca gacaaattat tccagcaaag agtaaggtgt atgacagcca
      781 gggcctgctg attttcagtg gcatggacct ctgcgactgc ctggacgagg actgcttggg
      841 atgcttctac gcttgcccca cttgtggctc taccaaatgt ggggctgagt gccgctgcga
      901 ccgaaagtgg ctgtatgagc agatagagat tgaaggagga gagataatcc ataataaaca
      961 tgctggaaaa gcatatggtc tgttatctcc ctgtcaccca tatgatattt tacaaaaatg
     1021 atcacccaaa tattgaccaa caaagacgaa aacgaggaaa agaattgaac agtgatattt
     1081 ctggaagtga agtttggatc agtcctgaat ggaattgtag acatcgccgc tggtcatggg
     1141 agtgttggtt accattgctg ttctggagac agatgcatca gaggaacctg atgatggaaa
     1201 cttaacccac attgctgagg gaagcagctg ggatgagcaa gaagacggtc ctagacaaag
     1261 ttatggtaaa aacttaacat taaagactgt attgtaaata gataacttca caacattgga
     1321 gtggtcagaa aggtacctgt taaatgttac taacgaaaca aatgctcttc agactacttt
     1381 taggcaaaac aataaaactc caattctcaa tacataaact ttaattttct tgtccatttg
     1441 tagctacaag tttttaatgt tttgataggt atctaaaggt catacaacaa ttctcttttc
     1501 ccttattagc tttttttttt tttttttttt ttggtgcatg gcctcacagt gctgtgcaaa
     1561 tagacccggc ccttagctgg aagcagggcc tgtgacacag aaaattgatc tccatgcaac
     1621 acaataggtg aatattttag ataagatact taagtgctaa aatacagttc ttctaactag
     1681 agatgaacac aaatgttcat tataccatca gctttttagt tcttaatcta tgcattcttg
     1741 gtgaaaattt gttcctaaag aaaaattcat tccttttttt taacatttaa aacatgagtg
     1801 tatagttcat aaatggctgc atatttgtct cagtcactgt tccattgctg tgaagagata
     1861 ccataaccaa ggcaatgctt ataaaaagaa gcattgaggg cttgcttaca gtttcaaagg
     1921 cttagcccat taaccatcat ggtggggaga acggtggcct gcagaaagat gtgtcagtat
     1981 ctgagatctt tatgtcctta cccacaggca agagagcctg gcatggcttt tgaaacctca
     2041 gtgctcacca ccaatgacat acttttctag caaggccacc ccttctaact cttatcagat
     2101 agtaccaccc gctggtaaac aagcattcaa gtgtatgatg agcctatggg acccttattc
     2161 aaaccttcac agcagtattt ctgactgtta aaactggata gatgtgatag atagacttct
     2221 aaaaatgtcc ctcaagagag tgatggaaag ttggagacgc tggggcatgt gggatagaaa
     2281 cagggcttct gggtactgat gaaggccgct gagaagtcag aatggaagca gccccagcac
     2341 ttcttactaa agccttcggc aggctcccgg agcctccaag ctgctgctgt tccgagtctt
     2401 agcagcttag agtgcttgga agcatgaaag ccagttggaa ttttccagta aaatagcatt
     2461 tttgtttagt aggttattct acacttgctt gcttttcttt gataaaatgt cattttcaac
     2521 ttgaaattaa atgtgctttc atttagggtt tttctttggc ccaagtgtca gaaacctaat
     2581 gagcaaatca ctagatctga atgtcagcta attggtatca aaacagtttt taactatatt
     2641 tttaaattaa aaggtagaat tgtttacttt ttctaattta aggaaatgtt ttgcagggct
     2701 aaactctagt tttatctgaa tccttagaat cctttggttt tagtcatttt tttattgtct
     2761 ctttttgttc ctttgtgtga gttagggctg cacattgctt ggactcttga gagaaaactt
     2821 ttatttgttt tctatcattc tgtttccttg ctgcagggcc ttgcactgta gcccaggctg
     2881 gccctggacc tctgcaggct tcgcaccaca gccttttcac gctgggcaac atgcatgtgt
     2941 taccaggctg ctaaatttaa agtttgggcc atttattttt acttacaatg ggagtatatt
     3001 tctagtgggg aaaaggcttt gtataaaaat ggctatatta attattcctt caaacgtatc
     3061 tgttcttttt gtaaagagaa taacgttttc caaggggaag agtctcaaca gttgctgtgt
     3121 gttctttgta tgtattcgga gaccaaacat accgtagagt ttatagacaa aagtatatct
     3181 gatcttgagt aaactaataa agactgtatt ttagaaataa acaatgcagg cttactgttt
     3241 aatttttaag tatgtatgtg agagagagag agatcttaag tacactaata aagactttta
     3301 gaaataat
//
