LOCUS       NM_019968               2649 bp    mRNA    linear   ROD 12-FEB-2025
DEFINITION  Mus musculus ADP-ribosylation factor-like 10 (Arl10), transcript
            variant 1, mRNA.
ACCESSION   NM_019968
VERSION     NM_019968.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2649)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 2649)
  AUTHORS   Dickinson,M.E., Flenniken,A.M., Ji,X., Teboul,L., Wong,M.D.,
            White,J.K., Meehan,T.F., Weninger,W.J., Westerberg,H., Adissu,H.,
            Baker,C.N., Bower,L., Brown,J.M., Caddle,L.B., Chiani,F., Clary,D.,
            Cleak,J., Daly,M.J., Denegre,J.M., Doe,B., Dolan,M.E., Edie,S.M.,
            Fuchs,H., Gailus-Durner,V., Galli,A., Gambadoro,A., Gallegos,J.,
            Guo,S., Horner,N.R., Hsu,C.W., Johnson,S.J., Kalaga,S., Keith,L.C.,
            Lanoue,L., Lawson,T.N., Lek,M., Mark,M., Marschall,S., Mason,J.,
            McElwee,M.L., Newbigging,S., Nutter,L.M., Peterson,K.A.,
            Ramirez-Solis,R., Rowland,D.J., Ryder,E., Samocha,K.E.,
            Seavitt,J.R., Selloum,M., Szoke-Kovacs,Z., Tamura,M., Trainor,A.G.,
            Tudose,I., Wakana,S., Warren,J., Wendling,O., West,D.B., Wong,L.,
            Yoshiki,A., MacArthur,D.G., Tocchini-Valentini,G.P., Gao,X.,
            Flicek,P., Bradley,A., Skarnes,W.C., Justice,M.J., Parkinson,H.E.,
            Moore,M., Wells,S., Braun,R.E., Svenson,K.L., de Angelis,M.H.,
            Herault,Y., Mohun,T., Mallon,A.M., Henkelman,R.M., Brown,S.D.,
            Adams,D.J., Lloyd,K.C., McKerlie,C., Beaudet,A.L., Bucan,M. and
            Murray,S.A.
  CONSRTM   International Mouse Phenotyping Consortium; Jackson Laboratory;
            Infrastructure Nationale PHENOMIN, Institut Clinique de la Souris
            (ICS); Charles River Laboratories; MRC Harwell; Toronto Centre for
            Phenogenomics; Wellcome Trust Sanger Institute; RIKEN BioResource
            Center
  TITLE     High-throughput discovery of novel developmental phenotypes
  JOURNAL   Nature 537 (7621), 508-514 (2016)
   PUBMED   27626380
  REMARK    Erratum:[Nature. 2017 Nov 16;551(7680):398. doi:
            10.1038/nature24643.. PMID: 29144450]
REFERENCE   3  (bases 1 to 2649)
  AUTHORS   West,D.B., Engelhard,E.K., Adkisson,M., Nava,A.J., Kirov,J.V.,
            Cipollone,A., Willis,B., Rapp,J., de Jong,P.J. and Lloyd,K.C.
  TITLE     Transcriptome Analysis of Targeted Mouse Mutations Reveals the
            Topography of Local Changes in Gene Expression
  JOURNAL   PLoS Genet 12 (2), e1005691 (2016)
   PUBMED   26839965
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 2649)
  AUTHORS   Koscielny,G., Yaikhom,G., Iyer,V., Meehan,T.F., Morgan,H.,
            Atienza-Herrero,J., Blake,A., Chen,C.K., Easty,R., Di Fenza,A.,
            Fiegel,T., Grifiths,M., Horne,A., Karp,N.A., Kurbatova,N.,
            Mason,J.C., Matthews,P., Oakley,D.J., Qazi,A., Regnart,J.,
            Retha,A., Santos,L.A., Sneddon,D.J., Warren,J., Westerberg,H.,
            Wilson,R.J., Melvin,D.G., Smedley,D., Brown,S.D., Flicek,P.,
            Skarnes,W.C., Mallon,A.M. and Parkinson,H.
  TITLE     The International Mouse Phenotyping Consortium Web Portal, a
            unified point of access for knockout mice and related phenotyping
            data
  JOURNAL   Nucleic Acids Res 42 (Database issue), D802-D809 (2014)
   PUBMED   24194600
REFERENCE   5  (bases 1 to 2649)
  AUTHORS   Louro,R., Nakaya,H.I., Paquola,A.C., Martins,E.A., da Silva,A.M.,
            Verjovski-Almeida,S. and Reis,E.M.
  TITLE     RASL11A, member of a novel small monomeric GTPase gene family, is
            down-regulated in prostate tumors
  JOURNAL   Biochem Biophys Res Commun 316 (3), 618-627 (2004)
   PUBMED   15033445
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC155262.2.
            
            On Dec 12, 2019 this sequence version replaced NM_019968.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR7652917.136895.1,
                                           SRR11927933.1052207.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-231               AC155262.2         104666-104896
            232-430             AC155262.2         105369-105567
            431-606             AC155262.2         108412-108587
            607-2649            AC155262.2         110340-112382
FEATURES             Location/Qualifiers
     source          1..2649
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="13"
                     /map="13 28.82 cM"
     gene            1..2649
                     /gene="Arl10"
                     /gene_synonym="Arl10a; Arm1"
                     /note="ADP-ribosylation factor-like 10"
                     /db_xref="GeneID:56795"
                     /db_xref="MGI:MGI:1930788"
     exon            1..231
                     /gene="Arl10"
                     /gene_synonym="Arl10a; Arm1"
                     /inference="alignment:Splign:2.1.0"
     CDS             49..780
                     /gene="Arl10"
                     /gene_synonym="Arl10a; Arm1"
                     /note="isoform 1 is encoded by transcript variant 1;
                     ADP-ribosylation factor-like 10A; ADP-ribosylation
                     factor-like protein 10; ADP-ribosylation factor-like
                     membrane-associated protein"
                     /codon_start=1
                     /product="ADP-ribosylation factor-like protein 10 isoform
                     1"
                     /protein_id="NP_064352.2"
                     /db_xref="CCDS:CCDS26530.1"
                     /db_xref="GeneID:56795"
                     /db_xref="MGI:MGI:1930788"
                     /translation="MAPRPLGPLVLALGGAAAVLGSVLFILWKAYFGRGRERRWDRGE
                     AWWGADTARLPQWDEWEPEDEEDEPALEELEQREVLVLGLDGSGKSTFLRMLAGKPPV
                     EGHVPTWGFNSVRLPTKNFEVDLLEIGGSQNLRFYWKEFVNEVDVLVFMVDSTDRLRL
                     PWARQELQKLLDRDPDLPVVIVANKQDLSGAMNMVELQQELGLLASYNQREVFLLAAS
                     IAPAGSGFGEPGTVHIWKLLLQLLS"
     exon            232..430
                     /gene="Arl10"
                     /gene_synonym="Arl10a; Arm1"
                     /inference="alignment:Splign:2.1.0"
     exon            431..606
                     /gene="Arl10"
                     /gene_synonym="Arl10a; Arm1"
                     /inference="alignment:Splign:2.1.0"
     exon            607..2649
                     /gene="Arl10"
                     /gene_synonym="Arl10a; Arm1"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2631..2636
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Arl10"
                     /gene_synonym="Arl10a; Arm1"
                     /note="hexamer: AATAAA"
     polyA_site      2649
                     /gene="Arl10"
                     /gene_synonym="Arl10a; Arm1"
                     /note="major polyA site"
ORIGIN      
        1 acagctccat cttccaccgc aggctggtcg gtcttgctcc caggccaaat ggcgccgcgg
       61 ccgctgggcc ccttggtgct ggctctgggt ggcgccgcag ccgtgctggg ctctgtgctc
      121 tttatcctct ggaaagctta cttcggccgc ggccgggagc ggcgctggga ccggggcgag
      181 gcctggtggg gcgcggacac tgcccgcctc cctcagtggg acgagtggga gcccgaggac
      241 gaggaagatg agccggcctt ggaagagctg gagcagcggg aagtgttggt gctgggcttg
      301 gatggctcag ggaaaagcac gttcttgcgc atgctggccg ggaagccacc ggtggaaggc
      361 cacgtcccta cctggggctt caactctgtt cggctgccta ccaagaattt cgaggtggac
      421 ctgttagaga ttggtggcag ccagaacctg cgcttttact ggaaggagtt tgtcaacgag
      481 gtggacgtgc tggtgttcat ggtggactcg actgaccggc taaggctgcc ctgggctcgg
      541 caggagctgc agaaactgtt ggacagggat ccggatctgc ctgttgttat agtggccaac
      601 aagcaggacc tgagcggggc catgaatatg gtggagctgc agcaggagct gggcctcctt
      661 gctagttata accagaggga ggttttcctc ttggcagcca gcattgcccc tgcaggatct
      721 ggctttgggg aacccggcac tgtgcacatc tggaaattgc tcttgcagct tctctcctaa
      781 gctggaccca cctgcctgct gcccagcctt gaataccaca tttctgcctt cttccgcatt
      841 gttgttgcta gcctaggcct tgggcaggag catcatagca acgcttcctc tcttcctcaa
      901 gagcaaggcc aaatccgtgc agaagtcttc ccggtgaggt agacgtgggg ctgaggcagg
      961 gaggacgcca tagtgtagct ccagcttgcc ttgccttgcc ttcctgcagt gtgatgctca
     1021 gcaggctcag tgccccccaa cccccctttg caggtcccac tgcttgcaga gcagtgtgga
     1081 tatcacaggt acttctgagc ctgcgtctcc cgtctcatgt ctcatggttc actcctggta
     1141 acatcataca tttaacatgt ggaaaggttc tgggtacagc acagcaagtc ctcgctccta
     1201 gtccttcatt atcctccagc ccctgctcgc tctgtctgtg gccttgtgtt cctgcctttc
     1261 tagccccggg gccattattt ttaaagggag atgatttcca tgtttttttt tttcctaaat
     1321 gccatccctg gcagtgccaa acctgaaaac cttagcacag aatcttctcg acacctcccc
     1381 actgttacta cagcctggcc ttgccagtct ttactgacca caaagtgcag ttcactgaac
     1441 agggtgaagg gtggttttgc ccaggtctgg agacaacctg ctgcttttgt actaactgtg
     1501 ccaacaccca tgtttacaca agtctagaga aggaaggagc cggagtcctg gaacaagact
     1561 ggagctaggg ggttgggggg gggggggtca gcctcagaat ggcattttat ttatttattt
     1621 atgtatttat caaaggaatg ggccaaagtt ctaggttctg tttctaggtg ctgtaatgaa
     1681 aaccctagga gactgtcaga aaagctgaag cttagaactg tttggaatta tgattgagat
     1741 taggtaacct atagctgtca atggagacac agaactgtag ctttcccctc ccctcccctc
     1801 ccctccccca aactggcctt gagaccataa ctggaagcaa gtacctcaag gagacctagt
     1861 actcatggtc caggacttag gataggacta gacgagccat cagaatgact cttcctgtgc
     1921 ccacggcggg cacatcacca agccttctgg gaccatttat ttgccagcca aaaacagact
     1981 gaaattctgt attctctgaa gtgaacattc cacgactgtg accgatgcaa agctggaccc
     2041 catgttgacc ctggtgcagg caaaagagcc tcggtctgcc agggacactg aatgacaaca
     2101 gcactgttgt ttgagacagt gtcactctgt agctcaggct ggccttgaat tgatggcact
     2161 tgtccttcct cagcctcccg tgctgggatt ataggaagca ctgtgccatc acgcctggcg
     2221 cattcagtct gctgtttgag aatcactgtg ctgtttgcca attgtccaac atacagccca
     2281 ggaagtggaa agcgtcgtta acgtgagcac aatcatcaga aggggggcgg gctgtgccct
     2341 tggactccag cccatgagaa cagaattact acaggacaaa gcactctcat tacaagggat
     2401 tgtcctgctt ttgtactaaa tatttaaaga atgactagga ttttaaagta gttgaaattt
     2461 tgttggacat tgtatgtctg ttctgaggat tccgcctctc cccagtgcta aagcttacct
     2521 tacaaccaga cttattgaga gaatttcttt ttcctaactg aaagaccttt gtctaatgcg
     2581 ttttatcatg tacaattgtc atattgtcca aggggtgggg gagtgttaag aataaacaat
     2641 ttcactgtg
//
