LOCUS       NM_025859                842 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Mus musculus ADP-ribosylation factor-like 1 (Arl1), mRNA.
ACCESSION   NM_025859
VERSION     NM_025859.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 842)
  AUTHORS   Kowalchuk,A.M., Maurer,K.A., Shoja-Taheri,F. and Brown,N.L.
  TITLE     Requirements for Neurogenin2 during mouse postnatal retinal
            neurogenesis
  JOURNAL   Dev Biol 442 (2), 220-235 (2018)
   PUBMED   30048641
REFERENCE   2  (bases 1 to 842)
  AUTHORS   Combes,A.N., Lesieur,E., Harley,V.R., Sinclair,A.H., Little,M.H.,
            Wilhelm,D. and Koopman,P.
  TITLE     Three-dimensional visualization of testis cord morphogenesis, a
            novel tubulogenic mechanism in development
  JOURNAL   Dev Dyn 238 (5), 1033-1041 (2009)
   PUBMED   19334288
REFERENCE   3  (bases 1 to 842)
  AUTHORS   Zahn,C., Jaschke,A., Weiske,J., Hommel,A., Hesse,D., Augustin,R.,
            Lu,L., Hong,W., Florian,S., Scheepers,A., Joost,H.G., Huber,O. and
            Schurmann,A.
  TITLE     ADP-ribosylation factor-like GTPase ARFRP1 is required for
            trans-Golgi to plasma membrane trafficking of E-cadherin
  JOURNAL   J Biol Chem 283 (40), 27179-27188 (2008)
   PUBMED   18662990
REFERENCE   4  (bases 1 to 842)
  AUTHORS   Zahn,C., Hommel,A., Lu,L., Hong,W., Walther,D.J., Florian,S.,
            Joost,H.G. and Schurmann,A.
  TITLE     Knockout of Arfrp1 leads to disruption of ARF-like1 (ARL1)
            targeting to the trans-Golgi in mouse embryos and HeLa cells
  JOURNAL   Mol Membr Biol 23 (6), 475-485 (2006)
   PUBMED   17127620
  REMARK    GeneRIF: These data suggest that lethality of Arfrp1 knockout
            embryos is due to a specific disruption of protein targeting, e.g.,
            of ARL1 and Golgin-245, to the Golgi.
REFERENCE   5  (bases 1 to 842)
  AUTHORS   Kenney-Hunt,J.P., Vaughn,T.T., Pletscher,L.S., Peripato,A.,
            Routman,E., Cothran,K., Durand,D., Norgard,E., Perel,C. and
            Cheverud,J.M.
  TITLE     Quantitative trait loci for body size components in mice
  JOURNAL   Mamm Genome 17 (6), 526-537 (2006)
   PUBMED   16783635
REFERENCE   6  (bases 1 to 842)
  AUTHORS   Ficker,M., Powles,N., Warr,N., Pirvola,U. and Maconochie,M.
  TITLE     Analysis of genes from inner ear developmental-stage cDNA
            subtraction reveals molecular regionalization of the otic capsule
  JOURNAL   Dev Biol 268 (1), 7-23 (2004)
   PUBMED   15031101
REFERENCE   7  (bases 1 to 842)
  AUTHORS   Lin,C.Y., Huang,P.H., Liao,W.L., Cheng,H.J., Huang,C.F., Kuo,J.C.,
            Patton,W.A., Massenburg,D., Moss,J. and Lee,F.J.
  TITLE     ARL4, an ARF-like protein that is developmentally regulated and
            localized to nuclei and nucleoli
  JOURNAL   J Biol Chem 275 (48), 37815-37823 (2000)
   PUBMED   10980193
REFERENCE   8  (bases 1 to 842)
  AUTHORS   Schurmann,A., Breiner,M., Becker,W., Huppertz,C., Kainulainen,H.,
            Kentrup,H. and Joost,H.G.
  TITLE     Cloning of two novel ADP-ribosylation factor-like proteins and
            characterization of their differential expression in 3T3-L1 cells
  JOURNAL   J Biol Chem 269 (22), 15683-15688 (1994)
   PUBMED   8195219
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AK010732.1.
            
            On Jul 25, 2007 this sequence version replaced NM_025859.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK010732.1, BC116894.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-842               AK010732.1         2-843
FEATURES             Location/Qualifiers
     source          1..842
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="10"
                     /map="10 44.19 cM"
     gene            1..842
                     /gene="Arl1"
                     /gene_synonym="2310008D22Rik"
                     /note="ADP-ribosylation factor-like 1"
                     /db_xref="GeneID:104303"
                     /db_xref="MGI:MGI:99436"
     exon            1..151
                     /gene="Arl1"
                     /gene_synonym="2310008D22Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             148..693
                     /gene="Arl1"
                     /gene_synonym="2310008D22Rik"
                     /note="ADP-ribosylation-like 1"
                     /codon_start=1
                     /product="ADP-ribosylation factor-like protein 1"
                     /protein_id="NP_080135.2"
                     /db_xref="CCDS:CCDS36025.1"
                     /db_xref="GeneID:104303"
                     /db_xref="MGI:MGI:99436"
                     /translation="MGGFFSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVT
                     TIPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGI
                     SKSELVAMLEEEELRKAILVVFANKQDMEQAMTPSEMANALGLPALKDRKWQIFKTSA
                     TKGTGLDEAMEWLVETLKSRQ"
     exon            152..289
                     /gene="Arl1"
                     /gene_synonym="2310008D22Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            290..371
                     /gene="Arl1"
                     /gene_synonym="2310008D22Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            372..483
                     /gene="Arl1"
                     /gene_synonym="2310008D22Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            484..662
                     /gene="Arl1"
                     /gene_synonym="2310008D22Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            663..842
                     /gene="Arl1"
                     /gene_synonym="2310008D22Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agttgctggc cgaccaggct tggaggagtc cgcttcggaa ccggagtccg ggagtagcgg
       61 aggtggcggc gcccaggctc aactaggagt cgctgccgag tcccggcctg tctctgagga
      121 tcggcgaggg cgcggcggcg gttcatcatg ggtggctttt tctcaagtat tttttccagt
      181 ctctttggaa ccagagaaat gaggatttta attttgggat tagatggtgc tggaaaaaca
      241 acaattttgt acaggttaca ggttggagaa gttgttacta ctattcccac tattggattt
      301 aatgtggaga cggtgacata caaaaatctc aaattccaag tttgggactt aggaggacag
      361 acaagtatca ggccatactg gagatgttat tattcaaaca cagatgcagt catctatgtc
      421 gttgacagtt gtgaccgaga tcgaattggc atttccaagt ctgagttagt tgccatgttg
      481 gaggaagaag agctgagaaa agccatttta gtggtgtttg caaataagca ggacatggaa
      541 caggccatga caccctcaga aatggcaaat gctcttgggt tacctgccct gaaggaccgg
      601 aagtggcaga tctttaaaac ttcagcaacc aaaggcactg gccttgatga ggcaatggaa
      661 tggttagttg aaaccctgaa aagcagacag tgagcccatt cacgtcagcg cctgtgagcc
      721 aacgctacat cacatactca ttggaagcag tcaggtgtgc ttcctgtgac tgctggagct
      781 gtgcgattct ggcatagaca gacctgcctg acttcaatat ttgtaataaa tataaaaaca
      841 ag
//
