LOCUS       NM_001081970            2696 bp    mRNA    linear   ROD 02-MAY-2024
DEFINITION  Mus musculus apolipoprotein L 8 (Apol8), transcript variant 3,
            mRNA.
ACCESSION   NM_001081970 XM_139463 XM_911496
VERSION     NM_001081970.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2696)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL583886.11.
            
            On Nov 10, 2017 this sequence version replaced NM_001081970.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK036408.1, BC129972.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849377,
                                           SAMN00849385 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-86                AL583886.11        186707-186792
            87-151              AL583886.11        188672-188736
            152-278             AL583886.11        189055-189181
            279-2696            AL583886.11        191764-194181
FEATURES             Location/Qualifiers
     source          1..2696
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="15"
                     /map="15 36.79 cM"
     gene            1..2696
                     /gene="Apol8"
                     /gene_synonym="9830006J20Rik; APOL-II; Apol2"
                     /note="apolipoprotein L 8"
                     /db_xref="GeneID:239552"
                     /db_xref="MGI:MGI:2444921"
     exon            1..86
                     /gene="Apol8"
                     /gene_synonym="9830006J20Rik; APOL-II; Apol2"
                     /inference="alignment:Splign:2.1.0"
     exon            87..151
                     /gene="Apol8"
                     /gene_synonym="9830006J20Rik; APOL-II; Apol2"
                     /inference="alignment:Splign:2.1.0"
     CDS             121..1140
                     /gene="Apol8"
                     /gene_synonym="9830006J20Rik; APOL-II; Apol2"
                     /note="apolipoprotein L, 2"
                     /codon_start=1
                     /product="apolipoprotein L2"
                     /protein_id="NP_001075439.1"
                     /db_xref="CCDS:CCDS56989.1"
                     /db_xref="GeneID:239552"
                     /db_xref="MGI:MGI:2444921"
                     /translation="MDPSDCEDAPGDRTFIEEAAEYLQHTSGREDLRLLLTEDGAWEA
                     FVAEAELSRADADTLRDALHALTANLAVEDQERLQRDLQDMERFMDAFPQVKLELEGH
                     IGKLRTLADKVDKVHRDCTISKLVAGSTSTVSGILTLLGLTLVPVTAGISLVLLATGM
                     GLGAAAAVTSVSSGIVDYTSRSLAKTEASHLVSTGMAKVKMVADAVVHSGPQVLSLSE
                     NCCRVLRCIEQSIYAIKLTKANPALAASAMGSTSAQSGKHVKKAFKGTALAISRRARI
                     MGIATAGVSLVGDVISLVKQSKNLHKGTKAKSAEELRQQARELEEKLEALIQMYEGLQ
                     AGSRR"
     exon            152..278
                     /gene="Apol8"
                     /gene_synonym="9830006J20Rik; APOL-II; Apol2"
                     /inference="alignment:Splign:2.1.0"
     exon            279..2696
                     /gene="Apol8"
                     /gene_synonym="9830006J20Rik; APOL-II; Apol2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gaacagcctt tctgtaaact gagtcacagc ccccatcaag aggtctacca tgcccacatc
       61 agcacccagc tgcagcacag gaccagcttg gatggaccag agacccccac acttgacacc
      121 atggaccctt cagactgcga ggatgcccca ggagacagaa ccttcattga ggaagccgct
      181 gagtacctgc agcacacatc gggcagggaa gacctgaggc tgctgctgac cgaagatgga
      241 gcctgggagg cctttgtggc ggaagctgag ttgtccagag ctgatgcaga cactttacgc
      301 gacgccctcc atgcactcac agcaaacctg gctgtggaag accaggaaag gctccaacgt
      361 gacctgcagg acatggagag gtttatggat gcgtttcccc aggtgaaact ggagctggag
      421 ggacacatcg ggaagctccg caccctggca gacaaggttg acaaggtgca cagggactgt
      481 accatctcca agcttgtggc cggctccacc agcactgtgt ctggcatcct gaccctcctt
      541 ggcctcactc tggtacccgt gacagctggg atcagtctgg tactcttggc aacagggatg
      601 ggcctgggag cagcagcggc tgtgactagt gtctcctctg ggatcgtgga ctacacaagt
      661 aggtcattag ccaaaacgga agccagccac ctggtgtcaa ccggcatggc caaagtgaag
      721 atggttgcag acgctgtggt tcattcagga ccccaggtct tgtccttatc tgagaattgc
      781 tgccgtgtcc tacggtgcat tgagcagagc atctatgcca tcaagctcac caaagccaac
      841 cctgccttag cagctagtgc catggggagc acctctgccc aaagtggtaa gcacgtgaag
      901 aaggccttta aaggcactgc cctggcaata agcagaagag cccggatcat gggtatagcc
      961 accgcaggtg tgtccctcgt tggggatgtg atcagccttg tgaaacagtc caagaatttg
     1021 cacaagggca caaaagcaaa gtctgccgag gagttgaggc agcaggctcg ggagctggag
     1081 gagaaactgg aggcgctcat ccagatgtat gaaggtttgc aggcaggctc aaggcggtaa
     1141 catgcttcct cccccagagc agtgcagaag acggggaggt gttctggatc tagagactga
     1201 agcatttttg tgagagggaa tcagacccat gaagttcagg acttagacat ttgttctttt
     1261 caaaacactt tgttgtggtt ttgtttatat gtgtgtgtgt gtatctgaga atgtgggtgt
     1321 aggtaccctc caaggccaga agagggcatc aggtctccca gagctggagt tacaggaggt
     1381 tgtgaactgc ttgatgtaga tactgggaat tgaactcata tcctcagcag gacagccagt
     1441 actcttaact gcttagccac ctttccagcc agcgttcgac attttctcta gctgagcatt
     1501 gtaagatcag tgccggtagc taagggagtg aagggaaaag aatgggagcc cgaaacaaga
     1561 gaccagaggg gactagagag tgcggggctg ggagggaaca gtcagttttg gagtaaagag
     1621 ctttggaggt ttgaataaag agagctgtgt ctgagcaagc aaggaaaaaa gcagcgaatc
     1681 tgacacactg ggaatgggag aaagccagag gaagaatcct ggatgtggaa gagccactgt
     1741 gacttcctcg gatgaccgtg gtggtggtga caggtggagg tgacagcaga gtgggcacgg
     1801 cagttgtcaa ggggccaggg tgcctttgag gaccagtgga attccattga cactctctag
     1861 ggtgtgctgg ggtggagatt gatttaggga tggggagtgg cccagattgg actgacaggt
     1921 caagagactt tgtgctgtac tgagggcaac cagcctgtgg tcaagagaca taccttctca
     1981 gagacacagc ttcctcatga gttggggggg gatggggggg gatgatggac aagaccacct
     2041 ctctgcttat cttcctcttc catctcatgt tctatataga ctttagctca atgaatatga
     2101 gccaattagt ctaggaaaac ggggcatccc agagtgaagg tcccaaagtc ataggtaagg
     2161 aaaacaacac gttagagcac gtttcaggat gtgagatagg agagcatccg ccctcctcct
     2221 aaccacccta actgctagac ccacagcccc ttcccatgag gcagtgtgct cagtccaagg
     2281 gcagagcaca gccttgtagg aggcacagag gttcttctgc tcacagataa gcaccagggg
     2341 acccaggaag gttagcaaca gggttgatcc ttcaaaggaa gggatgtata gcctgttatc
     2401 tgcccagaag actgggagca gacatggtta atagtttggt gacctttgtg ctattttgtg
     2461 tccaagacca caccggatct tccctctaga tccttactgt gaacttgtct atctacagaa
     2521 cccatcgtta tgaaagatgt cacgtataca gaaagagttt gacgtaatca tgtcttaagc
     2581 tttattgtgc acacaggaat gagttaatta tcaccacgaa agtgttcacc agcttgcggc
     2641 gtgcttcaat atgtctaaaa taaactactt ggggccagac tccgacagtt tgaacc
//
