LOCUS       NM_177744               3033 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus apolipoprotein L 10A (Apol10a), mRNA.
ACCESSION   NM_177744 XM_142954
VERSION     NM_177744.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3033)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL591864.14.
            
            On Oct 23, 2007 this sequence version replaced NM_177744.3.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK033521.1, BB624955.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849380, SAMN00849389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-85                AL591864.14        88759-88843         c
            86-166              AL591864.14        84594-84674         c
            167-293             AL591864.14        80924-81050         c
            294-3033            AL591864.14        74821-77560         c
FEATURES             Location/Qualifiers
     source          1..3033
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="15"
                     /map="15 36.4 cM"
     gene            1..3033
                     /gene="Apol10a"
                     /gene_synonym="9030421J09Rik"
                     /note="apolipoprotein L 10A"
                     /db_xref="GeneID:245282"
                     /db_xref="MGI:MGI:3036238"
     exon            1..85
                     /gene="Apol10a"
                     /gene_synonym="9030421J09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            86..166
                     /gene="Apol10a"
                     /gene_synonym="9030421J09Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             130..1086
                     /gene="Apol10a"
                     /gene_synonym="9030421J09Rik"
                     /codon_start=1
                     /product="apolipoprotein L 10a"
                     /protein_id="NP_808412.1"
                     /db_xref="CCDS:CCDS27601.1"
                     /db_xref="GeneID:245282"
                     /db_xref="MGI:MGI:3036238"
                     /translation="MDWNEILEDIRKVERRIVEKFIEDLTENFLRTDLRSLITEDGAW
                     NGFLETAELSSEEKAALRDALKESSAQKPSGENDRPERKPQKEQILREVPQLKKKLEV
                     HISKLRELADKLDLVHKCCTISNVVSLTLSAASGVLKLLDFVLSQIYGMPRRALSATS
                     EGLGMASDMINITTTIVGESFRQSYESEARRLVGASINILYEIINITPMITVKLYYTV
                     KDLVEAFKTLTGQIRAIRTAISNSDLGTQARNPASTGRSSGQGVPQMISRARIREIGL
                     TVPFLEQDLRDLAQQFEVLKDGAKTESGGALRDLAHKLEENL"
     exon            167..293
                     /gene="Apol10a"
                     /gene_synonym="9030421J09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            294..3033
                     /gene="Apol10a"
                     /gene_synonym="9030421J09Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtctcagatg tgcagctggt gactggaacc acacagctaa ggacagctgg gacacatcca
       61 aacgtggctg caggaagatt ccttgcctgc acacctggaa agcagtaaga aaaaacttgt
      121 caaaatccaa tggattggaa tgagatctta gaggacatta ggaaagtgga acgtcgcatt
      181 gttgaaaaat tcattgaaga tctcacagaa aatttcttaa gaacagatct gaggagcctt
      241 ataactgaag atggagcctg gaatggattt ttggaaacag cagagttgtc aagtgaggag
      301 aaagctgcac tgcgtgatgc tctgaaggag agttcagcac agaagccctc tggtgaaaat
      361 gacagacctg aaaggaagcc acagaaagag cagattttgc gagaggttcc tcagttgaag
      421 aagaaacttg aggtccatat cagtaagctc cgagagctgg ctgacaaact tgacctggtg
      481 cacaagtgct gcaccatctc caatgtggtg tccctcactc ttagtgctgc ttcaggagtc
      541 ctcaagctcc ttgattttgt tctgtcacag atctatggaa tgcccaggcg agcactctca
      601 gcaacctctg agggtctggg aatggcatca gatatgatta atattactac caccattgtg
      661 ggagaaagtt tcagacagtc atatgaatca gaagccagac gcctggttgg agccagcata
      721 aatatacttt acgagattat aaatatcact cctatgatca cagtcaagct ttattataca
      781 gttaaggatt tagttgaagc cttcaaaacc ctcacgggtc agatccgagc catcaggaca
      841 gccatatcca actctgacct tggaacacag gccaggaacc ctgcatccac tggaagaagc
      901 tctggacagg gtgtccccca gatgatcagt agagccagga ttagagaaat agggcttaca
      961 gttccgttcc ttgaacagga tcttcgggac cttgcgcaac aattcgaggt tttgaaggat
     1021 ggggcaaaaa cagagtcagg tggagcactg cgggacctgg ctcacaagct ggaggagaac
     1081 ctttagaaat ttgagcagaa gtgcaaggct ctgcagtcag acctgcctca gtgacgccct
     1141 cccctaagca gcttagaatt cagaggagat gatccttaca ggggtgggga caattttttt
     1201 tcttagcatt attgtcagaa atatttagtt tctaaaagat cacaaaaaag ttggtgggaa
     1261 gggagaaggt taagtgtctt acaggaaacc tgggttaatg gcagagcagc ctaaagaaat
     1321 ggtggctgga gcaaaatgca ggaacatagg gagtggaaat ggcggtccag acctgcacag
     1381 ggacacacac ccgtgctaca acatgctata acaagggaaa cagcctgagg tcaagtccag
     1441 ggaaaagatt gttgtggagt ttgaatttct ctggctgagc agagcgaggt caatgtagaa
     1501 ggctggagat cccaggagaa gaggaacctg gagtctaaaa ggggatccga cttccggcag
     1561 agtggagact gcagacaagt cagcacccat ctctctaaca acaccctgct gcatctgaac
     1621 atctgtgggg tctcctcgag gtcttgtgct ggacttgcta atgcttagct gtctgagaaa
     1681 tgatattgct ttagtgggtt tgctttgctg tacttttttc atagattttt tttttggggg
     1741 gtggagggta cgggagcaga tttaaattag gaaagcagaa agtacttttt atagactttg
     1801 tgtgtgtgta tagattatgg ctttatgatg tatctgtcat ggaatttcta ggtagaccag
     1861 aaatttgcta tggtcttcct aagtgttgga atttctgtgt ctgtaccaca ttgttgatgt
     1921 attattgact acagtataga gttcactact tgtgctaaac aacatctgtg ggtgttgaca
     1981 agtgcttcgt gtgccataca tttgaaatca tatagtatgc tacctttcag atagactttg
     2041 acctagcaat atgcatgtga gaaacaaaca aacaaacaaa aaatcaaaag aaggcggggt
     2101 cagagtgacc tagagtgtca ggaagcctgg ggagcaggaa atgggagaga gccagagtga
     2161 gagtcgaggc agattacaga aggtgtcaaa cactgtatgg aatggagatg aagtcaacac
     2221 ttttgggaca ggagactggg tatgtggctc tcaggtcttc tcaatctgtg tggcttgctg
     2281 gccagggtaa tgtctcagat tgatgggttc ctgtcttctt atgttttata ggctgtgttc
     2341 agtaaatgtt aactggctgt tcttgaaaag tggagtaaaa gcagtcactt gcagcctctg
     2401 gaccaccagt attggcagag tcctaagcac tgaggtggca accatacgcc tgctttcttg
     2461 tgttgtcaca gaacatgttg aatagtgttt tagccgatct tcttaatgta caagtgtgat
     2521 ggacttggct tctgaccctg gatttagaga tagaggcatg ggtgtgtccc ggtccctgcc
     2581 gccctgactg ttcacgggtc tatgaatgtt ccagcccatt cctcactctg atcaaggcaa
     2641 tctgtcatgg tgggcctgtg gctcagcaga catttacatg gtcctgcatg tgcttttctc
     2701 tgcgaagctg aaatcatgat attgaaagga gataaaatca agagtaaaaa aaaattaatt
     2761 taaaatatag ccacaagtct ttgaggaagt gtggtcgcta gtgtctccta tcttaggctc
     2821 cccgtcttgg cttgttcttg gctcagtctc tgagttgtgg aatgaaagcg catgcctctt
     2881 cctcatccag tctccccatc tgcagcatca cagtacagcc ccacattata cttcagagtc
     2941 acacactgat ttgaaaaatg tggagagatt tgtgttttag ggaatgattg taaaactcca
     3001 atcaaatggt gaaataaatg tgttgcacac tgt
//
