LOCUS       NM_001081197            1566 bp    mRNA    linear   ROD 01-FEB-2024
DEFINITION  Mus musculus apolipoprotein B mRNA editing enzyme catalytic
            polypeptide-like 4 (Apobec4), mRNA.
ACCESSION   NM_001081197 XM_355245
VERSION     NM_001081197.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1566)
  AUTHORS   Rogozin,I.B., Basu,M.K., Jordan,I.K., Pavlov,Y.I. and Koonin,E.V.
  TITLE     APOBEC4, a new member of the AID/APOBEC family of polynucleotide
            (deoxy)cytidine deaminases predicted by computational analysis
  JOURNAL   Cell Cycle 4 (9), 1281-1285 (2005)
   PUBMED   16082223
  REMARK    GeneRIF: APOBEC4 is expressed primarily in testis which suggests
            the possibility that it is an editing enzyme for mRNAs involved in
            spermatogenesis
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AC123613.16.
            
            On Feb 6, 2007 this sequence version replaced XM_355245.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK017014.1, BY716698.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849381, SAMN00849384
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-214               AC123613.16        113479-113692
            215-1566            AC123613.16        119121-120472
FEATURES             Location/Qualifiers
     source          1..1566
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="1"
                     /map="1 65.01 cM"
     gene            1..1566
                     /gene="Apobec4"
                     /gene_synonym="4933431M11Rik"
                     /note="apolipoprotein B mRNA editing enzyme catalytic
                     polypeptide-like 4"
                     /db_xref="GeneID:71281"
                     /db_xref="MGI:MGI:1918531"
     exon            1..214
                     /gene="Apobec4"
                     /gene_synonym="4933431M11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            215..1566
                     /gene="Apobec4"
                     /gene_synonym="4933431M11Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             245..1369
                     /gene="Apobec4"
                     /gene_synonym="4933431M11Rik"
                     /note="apolipoprotein B mRNA editing enzyme, catalytic
                     polypeptide-like 4 (putative)"
                     /codon_start=1
                     /product="putative C->U-editing enzyme APOBEC-4"
                     /protein_id="NP_001074666.1"
                     /db_xref="CCDS:CCDS35738.1"
                     /db_xref="GeneID:71281"
                     /db_xref="MGI:MGI:1918531"
                     /translation="MEPLYEEILTQGGTIVKPYYWLSLSLGCTNCPYHIRTGEEARVP
                     YTEFHQTFGFPWSTYPQTKHLTFYELRSSSKNLIQKGLASNCTGSHNHPEAMLFEKNG
                     YLDAVIFHNSNIRHIILYSNNSPCNEAKHCCISKMYNFLMNYPEVTLSVFFSQLYHTE
                     KQFPTSAWNRKALQSLASLWPQVTLSPICGGLWHAILEKFVSNISGSTVPQPFIAGRI
                     LADRYNTYEINSIIAAKPYFTDGLLSRQKENQNREAWAAFEKHPLGSAAPAQRQPTRG
                     QDPRTPAVLMLVSNRDLPPIHVGSTPQKPRTVVRHLNMLQLSSFKVKDVKKPPSGRPV
                     EEVEVMKESARSQKANKKNRSQWKKQTLVIKPRICRLLER"
ORIGIN      
        1 gaggcagcca cacctcagca agaactaacc tggaccagaa aaaattaaaa gaactaatag
       61 aaacagaaaa ggattcctgc tgtggtatcc gagacgagtc ttgatggcac aggtgccctc
      121 tgaatctacg tgaagcaagg catgggactt taagaagaca aagaaccagt gcctctaaca
      181 cctgcagtgt gagccaagcc tggagacaaa gatgatttgc agctagaaga tcatacaatc
      241 ctcaatggag cccctgtatg aggagattct aacccaaggt ggaacaatag tcaaacctta
      301 ctactggctc agcctttctc taggttgcac caactgccct taccacattc ggacaggcga
      361 ggaagcgaga gttccctaca cagaatttca tcagactttt ggattcccat ggtcaacgta
      421 ccctcaaaca aaacacctca cattttatga gctgagaagt tcctccaaga acctgataca
      481 aaagggcctt gctagcaact gcaccgggag tcacaaccac ccagaagcaa tgctatttga
      541 gaagaacggt taccttgatg cagtcatatt ccataacagc aacatcagac atatcattct
      601 gtattccaac aactcccctt gtaacgaggc taagcactgc tgcatcagca aaatgtacaa
      661 cttcctgatg aactatccgg aagtcaccct tagtgttttc ttttctcagc tctaccatac
      721 tgaaaaacag tttcctacct cagcatggaa ccgtaaggct ctccagagcc tggccagctt
      781 atggccccag gtcactttga gtccaatatg tggtggcctt tggcatgcta ttcttgaaaa
      841 gtttgttagc aacatctctg gatcaactgt tcctcagccc tttatagctg ggagaatcct
      901 ggctgacagg tataacactt atgaaatcaa ctccatcata gcagcaaagc cttacttcac
      961 tgatggtctt ctgagccgac aaaaagagaa tcagaaccga gaagcctggg cagcttttga
     1021 aaagcacccc ttaggcagtg ctgctcctgc ccagaggcag cccacaaggg gtcaggaccc
     1081 caggactcct gccgtcctca tgctggtgtc taacagagat ctaccgccaa ttcatgtggg
     1141 ttcaacccca caaaaaccca ggaccgtggt aaggcacttg aatatgcttc aactgtcatc
     1201 cttcaaagtc aaagatgtaa agaaacctcc ctcgggcagg ccagtggagg aggtggaagt
     1261 catgaaggag tctgcaagga gccaaaaggc aaacaaaaag aacagaagcc aatggaagaa
     1321 acagactcta gttatcaagc caagaatttg ccgtttactg gagaggtaac aaaataaata
     1381 aataaataaa atggaattct ctctcccagg tctgactaag atggagataa attgatgtta
     1441 aaaaaaactg attattataa caactcctat cattgacact gttttcaaca taatccaaaa
     1501 ctgtcagaag ggactttatc tctctttctg aaagtaacag caacaaaata aatggctttt
     1561 tactat
//
