LOCUS       XM_036162116             982 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus apurinic/apyrimidinic endonuclease 2
            (Apex2), transcript variant X7, mRNA.
ACCESSION   XM_036162116
VERSION     XM_036162116.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000086.8) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..982
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="X"
     gene            1..982
                     /gene="Apex2"
                     /gene_synonym="ape2; C430040P13Rik"
                     /note="apurinic/apyrimidinic endonuclease 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 ESTs, 45 long SRA reads, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     9 samples with support for all annotated introns"
                     /db_xref="GeneID:77622"
                     /db_xref="MGI:MGI:1924872"
     CDS             104..781
                     /gene="Apex2"
                     /gene_synonym="ape2; C430040P13Rik"
                     /codon_start=1
                     /product="DNA-(apurinic or apyrimidinic site) endonuclease
                     2 isoform X5"
                     /protein_id="XP_036018009.1"
                     /db_xref="GeneID:77622"
                     /db_xref="MGI:MGI:1924872"
                     /translation="MLRVVSWNINGIRSPLQGLACQEPSSCPTALRRVLDELDADIVC
                     LQETKVTRDVLTEPLAIVEGYNSYFSFSRSRSGYSGVATFCKDSATPVAAEEGLSGVF
                     ATLNGDIGCYGNMDEFTQEELRVLDSEGRALLTQHKIRTLEGKEKTLTLINVYCPHAD
                     PGKPERLTFKMRFYRLLQMRAEALLAAGSHVIILGDLNTAHRPIDHCDASSLPEPDDR
                     MRVHQLS"
ORIGIN      
        1 gcccggtgga aacgcgagag gaaggcgggg agccagctca cttccgggca gcaatgcatt
       61 tgcccgccta agcttccttt gggaaactgt accgtttacc aaaatgctgc gcgtggtaag
      121 ctggaacatc aatgggatcc ggagtcccct gcaaggcctt gcatgccagg aacccagcag
      181 ctgtcccacg gccttgcgac gcgttttgga cgagctggat gctgatattg tctgtctcca
      241 ggagaccaaa gtgaccagag atgtactgac agagcccctg gctattgttg agggttataa
      301 ctcctatttc agcttcagcc gcagccgtag tggctattct ggtgtggcta ccttctgtaa
      361 ggacagtgct accccagtag ctgctgaaga aggcctgagt ggtgtgtttg ccaccctgaa
      421 tggagatatt ggttgctatg gaaacatgga tgagttcacg caagaggaac tccgggttct
      481 ggatagtgag ggccgggccc tccttacaca gcacaagatc cgcacattgg aagggaagga
      541 gaagactttg accctgatca atgtgtactg ccctcacgcg gatcctggga agcctgagcg
      601 gctgaccttc aagatgcgct tctatcgcct gctccagatg cgagcagaag cgctcctggc
      661 agctggcagt cacgtgataa tcctggggga cctgaataca gcccaccgac ccattgacca
      721 ctgcgatgca agtagtctgc cagaacctga tgatcgaatg agagttcacc aacttagcta
      781 gtttgatttg ccctgggaaa cccatccctg cctctgagat gacaggcaga caccagaact
      841 gcccagcttt gacttgagtc gtggggagcg aaactttcat tctcaagctt atgggtaaag
      901 cacattatcc agtaaaccat ctcgccagcc ctgaaaaact ttttaacttg tttctcctct
      961 tctctcctct cctcccctcc cc
//
