LOCUS       NM_001024851            2968 bp    mRNA    linear   ROD 31-OCT-2023
DEFINITION  Mus musculus ankyrin repeat domain 34A (Ankrd34a), transcript
            variant 1, mRNA.
ACCESSION   NM_001024851 XM_619938 XM_623038
VERSION     NM_001024851.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2968)
  AUTHORS   Bedogni F and Hevner RF.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2968)
  AUTHORS   Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, Magen
            A, Canidio E, Pagani M, Peluso I, Lin-Marq N, Koch M, Bilio M,
            Cantiello I, Verde R, De Masi C, Bianchi SA, Cicchini J, Perroud E,
            Mehmeti S, Dagand E, Schrinner S, Nurnberger A, Schmidt K, Metz K,
            Zwingmann C, Brieske N, Springer C, Hernandez AM, Herzog S, Grabbe
            F, Sieverding C, Fischer B, Schrader K, Brockmeyer M, Dettmer S,
            Helbig C, Alunni V, Battaini MA, Mura C, Henrichsen CN,
            Garcia-Lopez R, Echevarria D, Puelles E, Garcia-Calero E, Kruse S,
            Uhr M, Kauck C, Feng G, Milyaev N, Ong CK, Kumar L, Lam M, Semple
            CA, Gyenesei A, Mundlos S, Radelof U, Lehrach H, Sarmientos P,
            Reymond A, Davidson DR, Dolle P, Antonarakis SE, Yaspo ML, Martinez
            S, Baldock RA, Eichele G and Ballabio A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC122037.2.
            
            On Aug 26, 2022 this sequence version replaced NM_001024851.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC052924.1, SRR17784644.1095310.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-207               AC122037.2         53295-53501         c
            208-2968            AC122037.2         49977-52737         c
FEATURES             Location/Qualifiers
     source          1..2968
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="3"
                     /map="3 41.93 cM"
     gene            1..2968
                     /gene="Ankrd34a"
                     /gene_synonym="Ankrd34"
                     /note="ankyrin repeat domain 34A"
                     /db_xref="GeneID:545554"
                     /db_xref="MGI:MGI:3617846"
     exon            1..207
                     /gene="Ankrd34a"
                     /gene_synonym="Ankrd34"
                     /inference="alignment:Splign:2.1.0"
     exon            208..2968
                     /gene="Ankrd34a"
                     /gene_synonym="Ankrd34"
                     /inference="alignment:Splign:2.1.0"
     CDS             324..1811
                     /gene="Ankrd34a"
                     /gene_synonym="Ankrd34"
                     /note="ankyrin repeat domain 34"
                     /codon_start=1
                     /product="ankyrin repeat domain-containing protein 34A"
                     /protein_id="NP_001020022.2"
                     /db_xref="CCDS:CCDS38556.1"
                     /db_xref="GeneID:545554"
                     /db_xref="MGI:MGI:3617846"
                     /translation="MLHTEGHALLRAVGQGKLRLARLLLEGGAYVNEGDAQGETALMA
                     ACRARYDDPQNKARMVRYLLEQGADPNIADRLGRTALMHACAGGGGAAVASLLLAHGA
                     DPSVRDHAGASALVHALDRGDRETLATLLDACKAKGTEVIIITTDTSPSGTKKTRQYL
                     NSPPSPGVEDPAPAPPSPGVCTSPSEVQLQTAGGGRGLLSPRAQEEEEKRDIFEFPLP
                     KPPDDPSPSEPLPKPPRHPPKPLKRLNSEPWGLVAPPQPVPPAEGRPGLERLAAEFNG
                     LTLTGRPRLSRRHSTEGPEDPPPWAEKVTGGGPLSRRNTAPEAQESGLPSGLRQKLSR
                     MEPVELDTPGHFCPDSPESSRLSLERRRYSASPLTLPPAGSVSSPRQSQESLPGAVSP
                     LSGRRRSPGLLERRGSGTLLLDHISQTRPGFLPPLNVSPHPPIPDIRPQPGGRAPSLP
                     APPPSGAPGSPRTKRKLVRRHSMQTEQIRLLGGFQSLGGPGEPGR"
ORIGIN      
        1 ctctcctccg gagccggcgc tgtgcccggg gcgcaccggg aggagggacc aggattcagc
       61 gctggggcac agatactgac accaagggaa tccgggtacc cccccacaca cgccatgtgg
      121 gtccccaggt acccggctcc tccaacccag aggcccccat ggccccggcc tcaatcctgg
      181 ccaggcagag attatgcgga cattcaggga taggcttcac taccgagact tcaggcctct
      241 cccaaccacc acccccatac tcctagatat cttcggcagg tcccagtccc ggctccatcg
      301 gtgtttttgc ccgagccgca gctatgctgc acaccgaggg ccacgctctt cttcgagctg
      361 tgggacaggg taagctacgc ttggcccgtt tgcttctgga gggaggagcc tacgtgaatg
      421 agggtgatgc ccagggggag actgcgctaa tggcggcctg tagggcccgt tacgacgacc
      481 ctcagaacaa ggcgcgcatg gtacgctatc tcttggagca aggcgcggat cccaacatcg
      541 cagaccgttt aggacgtacc gcgctgatgc atgcttgcgc cgggggtggg ggagccgcag
      601 tggcctctct gctccttgcc cacggcgcag acccttcagt tcgagatcac gctggcgcct
      661 cggcgcttgt ccacgccctg gaccgagggg accgcgagac ccttgccaca ctgctggacg
      721 cctgcaaggc caagggcacg gaggtcatca tcataacgac ggatacctcg ccctcgggca
      781 ccaagaagac caggcagtat cttaattccc caccgtcccc aggggtagag gaccctgcac
      841 ccgctcctcc tagtccaggg gtctgcacat cgccttcaga agtccaactg cagactgcag
      901 gaggagggcg cgggttgtta tcccctcgcg cccaggaaga agaggagaaa agagacattt
      961 ttgaatttcc tcttcccaag ccccctgatg acccttcccc ttccgagcct ctccccaagc
     1021 cacctcgaca tcctccaaaa ccactcaaaa ggctcaattc cgagccctgg ggccttgtgg
     1081 ctcctcctca accggttcct cctgcagaag ggaggcccgg tttggagcgt ctggctgctg
     1141 aattcaatgg cttgaccctg accgggagac cgcgtctttc tcggcgtcac agcaccgaag
     1201 gcccggagga cccgccccca tgggcggaga aagtgacggg tgggggtcct ctctcgcgcc
     1261 gaaacactgc gcccgaggct caggagtctg gtcttccttc agggctaagg caaaaactga
     1321 gccgcatgga gccggtggag ctcgacaccc ctggacattt ttgccctgac tcccccgagt
     1381 ccagccggtt atccctggag cgccggcgat acagcgcctc tccgctgacc ctccctccag
     1441 cgggctcagt ttcctcccca cgccagtccc aggaaagtct gcccggggct gtatccccgc
     1501 tgagcggacg gaggcggagt ccagggctgc tagagagaag gggctccggg accttgctcc
     1561 tggaccacat ctcgcaaaca cgaccaggtt tcttgcctcc tctcaacgtc agtccccacc
     1621 ctcccatccc cgacattcgt ccccaacccg gaggtcgggc accctcactg cctgcccctc
     1681 caccctctgg ggcaccaggg tctcccagga ccaagcgcaa gttggtgaga cgccactcca
     1741 tgcagactga gcagattcgc ctgctagggg ggtttcagag tctaggtggg cctggggaac
     1801 ccgggcgctg aaggaaatga ggggcgccaa ggagggggag ggtcagtacc ctgatagagg
     1861 gagaaccagc tgatacctcg gacacgggat ctcttgcatg tgctcctggc actgtgcacg
     1921 cacacatggg taagcatgtg tctgtccaca agcacagtac acttactagc gagaaggata
     1981 aatactgtgt ttaccgggtg tgtagaccca cgcaatcgtg ccctggtcat gtcacaagta
     2041 catgggatta cttggggacc cataggcaca gcacaccaac agaggaccac ttgtgctagg
     2101 gtcccagact cacatttgtt ccgaagcagc agggagcccc cactcatggc tggtctcctg
     2161 tatctttgcc cctcctgaag aacccttgct ttccctgtgt gccctgcagc gtggcctagc
     2221 atcccctcgc acagtctgct ttctcttcat gactatctcg ccccattctg caggccttgc
     2281 ttctccatgc ctggctcctt gttcacaccc tgctcccatc cgcttttcag gatgtcttct
     2341 tcactgttct tggggttccc aaagcagctc ccaatctcac ttctgttgct gccttccacg
     2401 ctctccactt ctcagtttcc tgctttttat tccctccctg tgccccccac acacacatat
     2461 accactccag attgtcttgt ttaccccagg ggtaggtcat gggctcaaag ttgctcttct
     2521 gtgtgtctga gcttatgaac aaccccccac aggtagaagt ggggagcaag cctaagtcag
     2581 tcctcttacc acttgtcaaa taaatgtgtt cagaagtctg ttttgtcact gctgcctgaa
     2641 agtgtgggtt gggggggggg gtgaagagag agggcatggg agggtgagac ttacagtcac
     2701 aactactcag ggagccaatc tagaggctgc agctactttc tttccaggag accaactgac
     2761 cagtagtggt tgtagaagaa aaggcaaatg ggccctgtgt tctgaggttt taaggcattt
     2821 ggtgggcctc cccccagcct ccccatgcct gacttttaat gatttaagat tcttactgcc
     2881 cctcttctcc ataagcagat gctacttcct acatcttgac cacacaggtt ttgttgttgt
     2941 tttaaataca gggtttaatt tcatttca
//
