LOCUS       NM_001190371            3256 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus ankyrin repeat domain 29 (Ankrd29), transcript variant
            1, mRNA.
ACCESSION   NM_001190371 XM_001474217 XM_129028
VERSION     NM_001190371.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3256)
  AUTHORS   Darakhshan F, Badie C, Moody J, Coster M, Finnon R, Finnon P,
            Edwards AA, Szluinska M, Skidmore CJ, Yoshida K, Ullrich R, Cox R
            and Bouffler SD.
  TITLE     Evidence for complex multigenic inheritance of radiation AML
            susceptibility in mice revealed using a surrogate phenotypic assay
  JOURNAL   Carcinogenesis 27 (2), 311-318 (2006)
   PUBMED   16093251
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY091192.1, AK090336.1, AK162301.1 and BY479478.1.
            
            On or before Jun 19, 2010 this sequence version replaced
            XM_001474217.1, XM_129028.6.
            
            Transcript Variant: This variant (1) encodes the longer isoform
            (1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK090336.1, SRR7345562.4806637.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849381 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-49                BY091192.1         1-49
            50-746              AK090336.1         2-698
            747-1657            AK090336.1         700-1610
            1658-1681           AK162301.1         1086-1109
            1682-3248           AK162301.1         1113-2679
            3249-3256           BY479478.1         529-536
FEATURES             Location/Qualifiers
     source          1..3256
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="18"
                     /map="18 6.15 cM"
     gene            1..3256
                     /gene="Ankrd29"
                     /gene_synonym="G630054C21; G630054C21Rik; Gm95"
                     /note="ankyrin repeat domain 29"
                     /db_xref="GeneID:225187"
                     /db_xref="MGI:MGI:2687055"
     exon            1..110
                     /gene="Ankrd29"
                     /gene_synonym="G630054C21; G630054C21Rik; Gm95"
                     /inference="alignment:Splign:2.1.0"
     CDS             90..1019
                     /gene="Ankrd29"
                     /gene_synonym="G630054C21; G630054C21Rik; Gm95"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /codon_start=1
                     /product="ankyrin repeat domain-containing protein 29
                     isoform 1"
                     /protein_id="NP_001177300.1"
                     /db_xref="CCDS:CCDS50221.1"
                     /db_xref="GeneID:225187"
                     /db_xref="MGI:MGI:2687055"
                     /translation="MCRMSFKKETPLANAAFWAAKRGNLALLKLLLNSGRVDVDCRDS
                     HGTTLLMVASYAGHIDCVRELVLQGADINLQRESGTTALFFAAQQGHNDVVRFLFGFG
                     ASTECRTKDGGTALLAASQYGHMPVVETLLKHGANIHDQLYDGATALFLAAQGGYLDV
                     IRLLLSSGAKVNQPRQDGTAPLWIASQMGHSEVVRVMLLRGADRDAARNDGTTALLKA
                     ANKGYNDVIEELLKFSPTLGILKNGTSALHAAVLSGNVKTVALLLEAGADPALRNKAN
                     ELPAELTKNERILHLLRQKEGPGKNELGSILDR"
     exon            111..221
                     /gene="Ankrd29"
                     /gene_synonym="G630054C21; G630054C21Rik; Gm95"
                     /inference="alignment:Splign:2.1.0"
     exon            222..320
                     /gene="Ankrd29"
                     /gene_synonym="G630054C21; G630054C21Rik; Gm95"
                     /inference="alignment:Splign:2.1.0"
     exon            321..419
                     /gene="Ankrd29"
                     /gene_synonym="G630054C21; G630054C21Rik; Gm95"
                     /inference="alignment:Splign:2.1.0"
     exon            420..518
                     /gene="Ankrd29"
                     /gene_synonym="G630054C21; G630054C21Rik; Gm95"
                     /inference="alignment:Splign:2.1.0"
     exon            519..617
                     /gene="Ankrd29"
                     /gene_synonym="G630054C21; G630054C21Rik; Gm95"
                     /inference="alignment:Splign:2.1.0"
     exon            618..716
                     /gene="Ankrd29"
                     /gene_synonym="G630054C21; G630054C21Rik; Gm95"
                     /inference="alignment:Splign:2.1.0"
     exon            717..812
                     /gene="Ankrd29"
                     /gene_synonym="G630054C21; G630054C21Rik; Gm95"
                     /inference="alignment:Splign:2.1.0"
     exon            813..911
                     /gene="Ankrd29"
                     /gene_synonym="G630054C21; G630054C21Rik; Gm95"
                     /inference="alignment:Splign:2.1.0"
     exon            912..3256
                     /gene="Ankrd29"
                     /gene_synonym="G630054C21; G630054C21Rik; Gm95"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggaacgcgcg gggccgcccc tctgcggcgg gcgggcgcag agagcgagcg gggaccgagc
       61 ggggaccggc gggcggtggc acggcggaca tgtgcaggat gtccttcaag aaggaaactc
      121 cgcttgccaa tgctgcattc tgggcagcaa agaggggaaa cctggccctg ctgaaactgc
      181 tattaaacag tggccgtgtg gacgtggact gcagagacag tcacggcacc acacttctca
      241 tggttgcctc ctatgctggc cacatagact gtgtgaggga gcttgttctg cagggagcag
      301 acatcaacct ccagagagag tcaggtacaa ctgccctgtt cttcgctgcc cagcaaggcc
      361 acaatgatgt tgtgagattt ctctttggat ttggagcatc cactgaatgt cggaccaaag
      421 atgggggcac tgccctgttg gctgctagtc agtatgggca catgccagtg gtggagacct
      481 tgctgaaaca tggagccaac atccatgacc aactttatga tggagccacg gccctctttc
      541 tggctgccca aggtggctac ttggatgtca tccgactact gctgtcttca ggagcaaaag
      601 tcaaccagcc aaggcaggat ggaaccgcgc cactgtggat cgcctcccag atgggccaca
      661 gcgaggtggt gcgcgtgatg ctgctgcggg gagctgaccg tgacgctgct cgcaacgatg
      721 gtacgacagc attgctgaaa gcagccaaca aagggtataa cgatgtcata gaggagctgc
      781 tcaaattctc acctactctt ggtattttga agaatgggac ttcggctctc catgcagcag
      841 tgctcagtgg gaatgttaaa acggttgccc tgctcctgga agcaggggca gatccagcgt
      901 tgagaaacaa ggccaatgag ctcccagcag aactaaccaa aaatgaacgc atactgcacc
      961 tcctgagaca aaaagaagga cctgggaaga atgaacttgg atccatctta gatagatagg
     1021 aatttaggcc acagtgtcca gaaagaaatg gttcttaaca atgttggaaa tgaagaaaga
     1081 atgtctgccc tgtgggtttg cacactgtgc actgacccag gacggctcag ggtccacttc
     1141 cctttattta cagtgggctt ctcacactgc cctataactt agccctcggg gacatggata
     1201 gtcacagatt ccacagaaac ctatctacaa ctatgataac taagttcagc tccatgttgg
     1261 acatgatttc agtgctaaaa aaggaaacaa aagcttcatt ctttaagagt cagaggccac
     1321 ccttcaatga agcagtacat gtttactttt gtgtttaatg tagctatgct aaaatacaat
     1381 atgtttaatg tagctatgct aaaatacaat gtgtttaatg tagccatgct aaaatacaat
     1441 gtgtttaatg tagctgtgct aaaacacaat gcctccataa tagtttcatt tgtccattca
     1501 ttgtaaagta tttttatcac ccaaagatca gagtcatggt tcttgtgaac cagtgtatac
     1561 ataagcaatg gttatttaag atccactttt gacattccac tatgtgctac tcaaagatgg
     1621 gccataaaca catagaaaag aaaaactgtt tgttggtaaa aaaaaaaaaa aaaaaaaaaa
     1681 acctcaactt tttcctgact tgtaaagtca ctgtctccta gtccacattg tcaatgtatg
     1741 aggatagcaa tagggaattg aaaaccccaa catctgcaaa acacaggtct ctttgagctt
     1801 tgactctggt tgtatggtct ggagtccaat ttccaaggca caagcaagga cacaatatgc
     1861 tggggaatct ggcacttccc acagcactgt ctctgacggt gagctcactg gatgaaacac
     1921 gatatacatg agtactgttg ctgttactac tggggactct ccatagtaaa ggcagttgtt
     1981 agtatttacc aggtgctcat tgatacatac tcatgggtga attgattcca gcaaagaacc
     2041 acaagttcac caaactgttt gaggagggtc taaagttgat gctcaatgca cttccaatgg
     2101 tgtctaattg cctctgttgg tgcctaactg catatacaga aatcaatctt ccttctataa
     2161 tacaccgcat gaaacactaa tagtactttc atgtttaaac acatatccac tactctagct
     2221 catactatgc tccaggtccc aaccagtagt ctctgtgtaa agtcctgtta agatggaagg
     2281 gaaaataatc ctaaagaagg ttttgcttaa ccaaatgcag tgttatgaga agcactacct
     2341 ttaagtctat aaatgccaga atggaattct tgaaatcaga agatgctctc ttaaaattgt
     2401 ttatgataaa tgcaatcaga atgacaagat ttacagcaca caccctcaaa gaaggataaa
     2461 gtctgtctga ctgataagct ctgcagaaat ccccactcta gtttcaagat aaaagattag
     2521 aaagttgttc gttgccacaa cacctgacac aaatattttg gtagctcaag atcagtgcca
     2581 acttccccat tggcagcctt ttacttggca aagttatgca aatacacatt atcttcatgg
     2641 gaattttgaa atgctgtatt tgccttgaag aagaaattaa tgtggactta aatgctttgc
     2701 aatttcccct ttatttaacc ctataccaga accagttgtt catcataggt ccaaaagaaa
     2761 acagtattgc aaataccacc accaacaaca acaaatccaa aagacaggat cagaaacttc
     2821 atgtttttca ctaaaacctc ttgacattgg cctgtcacgt catatgaacc attgtagggc
     2881 catgaaatta attcagtatc tttagcaata cttaataaag acctttgtgc tgtatgaaac
     2941 agatatttgg gttagcattt catctagatg caattatgat gttatccgtg gcagggaagt
     3001 tgggtaagaa cctaccaaaa actgaacaag atgtctgtta tttcagaaac tgtatttcca
     3061 tttgcacaca tataaaggac tctttatatt agactcatag acaatccagt aagtcttaat
     3121 ccaaagactt aacaaaagca gttcttctgc aaataatcca tttagctgaa ctacaaaagt
     3181 ttgctactac atccatctgt ttgacaacac attccatgtt atacttaaaa taaagttaat
     3241 aaattgggaa atttgc
//
