LOCUS       NM_001374016            3499 bp    mRNA    linear   ROD 01-MAY-2024
DEFINITION  Mus musculus ankyrin repeat domain 24 (Ankrd24), transcript variant
            1, mRNA.
ACCESSION   NM_001374016 XM_030245270
VERSION     NM_001374016.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3499)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 3499)
  AUTHORS   Krey,J.F., Liu,C., Belyantseva,I.A., Bateschell,M., Dumont,R.A.,
            Goldsmith,J., Chatterjee,P., Morrill,R.S., Fedorov,L.M., Foster,S.,
            Kim,J., Nuttall,A.L., Jones,S.M., Choi,D., Friedman,T.B.,
            Ricci,A.J., Zhao,B. and Barr-Gillespie,P.G.
  TITLE     ANKRD24 organizes TRIOBP to reinforce stereocilia insertion points
  JOURNAL   J Cell Biol 221 (4) (2022)
   PUBMED   35175278
  REMARK    GeneRIF: ANKRD24 organizes TRIOBP to reinforce stereocilia
            insertion points.
REFERENCE   3  (bases 1 to 3499)
  AUTHORS   Okazaki,N., F-Kikuno,R., Ohara,R., Inamoto,S., Koseki,H.,
            Hiraoka,S., Saga,Y., Seino,S., Nishimura,M., Kaisho,T., Hoshino,K.,
            Kitamura,H., Nagase,T., Ohara,O. and Koga,H.
  TITLE     Prediction of the coding sequences of mouse homologues of KIAA
            gene: IV. The complete nucleotide sequences of 500 mouse
            KIAA-homologous cDNAs identified by screening of terminal sequences
            of cDNA clones randomly sampled from size-fractionated libraries
  JOURNAL   DNA Res 11 (3), 205-218 (2004)
   PUBMED   15368895
REFERENCE   4  (bases 1 to 3499)
  AUTHORS   Suzuki,H., Fukunishi,Y., Kagawa,I., Saito,R., Oda,H., Endo,T.,
            Kondo,S., Bono,H., Okazaki,Y. and Hayashizaki,Y.
  TITLE     Protein-protein interaction panel using mouse full-length cDNAs
  JOURNAL   Genome Res 11 (10), 1758-1765 (2001)
   PUBMED   11591653
REFERENCE   5  (bases 1 to 3499)
  AUTHORS   Puttagunta,R., Gordon,L.A., Meyer,G.E., Kapfhamer,D.,
            Lamerdin,J.E., Kantheti,P., Portman,K.M., Chung,W.K., Jenne,D.E.,
            Olsen,A.S. and Burmeister,M.
  TITLE     Comparative maps of human 19p13.3 and mouse chromosome 10 allow
            identification of sequences at evolutionary breakpoints
  JOURNAL   Genome Res 10 (9), 1369-1380 (2000)
   PUBMED   10984455
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC153919.8.
            
            On Sep 6, 2019 this sequence version replaced XM_030245270.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR17784646.667211.1,
                                           SRR13422597.546354.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-57                AC153919.8         22973-23029         c
            58-144              AC153919.8         21975-22061         c
            145-275             AC153919.8         21733-21863         c
            276-364             AC153919.8         21570-21658         c
            365-429             AC153919.8         20976-21040         c
            430-487             AC153919.8         20302-20359         c
            488-558             AC153919.8         18589-18659         c
            559-665             AC153919.8         18351-18457         c
            666-853             AC153919.8         17980-18167         c
            854-891             AC153919.8         17384-17421         c
            892-972             AC153919.8         16792-16872         c
            973-1080            AC153919.8         16593-16700         c
            1081-1125           AC153919.8         15916-15960         c
            1126-1224           AC153919.8         15738-15836         c
            1225-1297           AC153919.8         14680-14752         c
            1298-1416           AC153919.8         14309-14427         c
            1417-2793           AC153919.8         12835-14211         c
            2794-2922           AC153919.8         10295-10423         c
            2923-2988           AC153919.8         9870-9935           c
            2989-3499           AC153919.8         9118-9628           c
FEATURES             Location/Qualifiers
     source          1..3499
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="10"
                     /map="10 39.72 cM"
     gene            1..3499
                     /gene="Ankrd24"
                     /gene_synonym="4631433D01Rik; 5730519E19Rik; D10Bur2e"
                     /note="ankyrin repeat domain 24"
                     /db_xref="GeneID:70615"
                     /db_xref="MGI:MGI:1890394"
     exon            1..57
                     /gene="Ankrd24"
                     /gene_synonym="4631433D01Rik; 5730519E19Rik; D10Bur2e"
                     /inference="alignment:Splign:2.1.0"
     exon            58..144
                     /gene="Ankrd24"
                     /gene_synonym="4631433D01Rik; 5730519E19Rik; D10Bur2e"
                     /inference="alignment:Splign:2.1.0"
     exon            145..275
                     /gene="Ankrd24"
                     /gene_synonym="4631433D01Rik; 5730519E19Rik; D10Bur2e"
                     /inference="alignment:Splign:2.1.0"
     exon            276..364
                     /gene="Ankrd24"
                     /gene_synonym="4631433D01Rik; 5730519E19Rik; D10Bur2e"
                     /inference="alignment:Splign:2.1.0"
     exon            365..429
                     /gene="Ankrd24"
                     /gene_synonym="4631433D01Rik; 5730519E19Rik; D10Bur2e"
                     /inference="alignment:Splign:2.1.0"
     exon            430..487
                     /gene="Ankrd24"
                     /gene_synonym="4631433D01Rik; 5730519E19Rik; D10Bur2e"
                     /inference="alignment:Splign:2.1.0"
     exon            488..558
                     /gene="Ankrd24"
                     /gene_synonym="4631433D01Rik; 5730519E19Rik; D10Bur2e"
                     /inference="alignment:Splign:2.1.0"
     exon            559..665
                     /gene="Ankrd24"
                     /gene_synonym="4631433D01Rik; 5730519E19Rik; D10Bur2e"
                     /inference="alignment:Splign:2.1.0"
     exon            666..853
                     /gene="Ankrd24"
                     /gene_synonym="4631433D01Rik; 5730519E19Rik; D10Bur2e"
                     /inference="alignment:Splign:2.1.0"
     exon            854..891
                     /gene="Ankrd24"
                     /gene_synonym="4631433D01Rik; 5730519E19Rik; D10Bur2e"
                     /inference="alignment:Splign:2.1.0"
     exon            892..972
                     /gene="Ankrd24"
                     /gene_synonym="4631433D01Rik; 5730519E19Rik; D10Bur2e"
                     /inference="alignment:Splign:2.1.0"
     exon            973..1080
                     /gene="Ankrd24"
                     /gene_synonym="4631433D01Rik; 5730519E19Rik; D10Bur2e"
                     /inference="alignment:Splign:2.1.0"
     exon            1081..1125
                     /gene="Ankrd24"
                     /gene_synonym="4631433D01Rik; 5730519E19Rik; D10Bur2e"
                     /inference="alignment:Splign:2.1.0"
     exon            1126..1224
                     /gene="Ankrd24"
                     /gene_synonym="4631433D01Rik; 5730519E19Rik; D10Bur2e"
                     /inference="alignment:Splign:2.1.0"
     exon            1225..1297
                     /gene="Ankrd24"
                     /gene_synonym="4631433D01Rik; 5730519E19Rik; D10Bur2e"
                     /inference="alignment:Splign:2.1.0"
     exon            1298..1416
                     /gene="Ankrd24"
                     /gene_synonym="4631433D01Rik; 5730519E19Rik; D10Bur2e"
                     /inference="alignment:Splign:2.1.0"
     exon            1417..2793
                     /gene="Ankrd24"
                     /gene_synonym="4631433D01Rik; 5730519E19Rik; D10Bur2e"
                     /inference="alignment:Splign:2.1.0"
     exon            2794..2922
                     /gene="Ankrd24"
                     /gene_synonym="4631433D01Rik; 5730519E19Rik; D10Bur2e"
                     /inference="alignment:Splign:2.1.0"
     exon            2923..2988
                     /gene="Ankrd24"
                     /gene_synonym="4631433D01Rik; 5730519E19Rik; D10Bur2e"
                     /inference="alignment:Splign:2.1.0"
     exon            2989..3499
                     /gene="Ankrd24"
                     /gene_synonym="4631433D01Rik; 5730519E19Rik; D10Bur2e"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3466..3471
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Ankrd24"
                     /gene_synonym="4631433D01Rik; 5730519E19Rik; D10Bur2e"
                     /note="hexamer: AATAAA"
     polyA_site      3499
                     /gene="Ankrd24"
                     /gene_synonym="4631433D01Rik; 5730519E19Rik; D10Bur2e"
                     /note="major polyA site"
ORIGIN      
        1 gccctcctgc ggttcgccat gaagcagctg tgcctgtgtg ctgctgcctc cttcgcgctc
       61 cggctcagcc ccaccgacct cagctcctgc ccaccctgtg gccggtgccc tatcccaaaa
      121 cccgcagcca gaggcaggcg ccagggccaa gactggggca aaagtgacca gcgactgctc
      181 caggcagtgg agaacaacga tgtggccaga gtggcctcgt tgatcgccca caaggggctg
      241 gtgcctacaa aactggaccc cgagggcaag tctgcgttcc acttagcagc catgaggggt
      301 gcggcggggt gtctggaagt gatgctggct caaggtgccg atgtcatgag cacggatgga
      361 gcaggttaca atgcccttca cctggcagcc aagtacgggc acccagagtg tctgaagcaa
      421 ctcttggagg cttcctgcgt ggtggacatc gaggacagca gtgggtggac agcccttcac
      481 catgcagcgg ctggtggttg tctgtcctgc tcaaagctgc tctgttcctt taaggcacac
      541 atgaaccccc gggaccggtc gggtgccaca cccctcatca tagcggctca gatgtgtcac
      601 acagatctgt gccgcctcct cctacagcag ggggctgcca caaatgacca ggacctgcaa
      661 ggcaggacag ccttgatgct ggcatgtgag gggggcagcc ctgagactgt tgaagtactc
      721 ctgcagggtg gagcccagtt gagcatcact gatgcactgg gccaggatgc cactcactac
      781 ggagccctga ctggagacaa actcatcttg cagcttctac acgagtctgc acggcgctct
      841 tcacctccca gtgcctctct agaggaggac tccggagagg cctcatccca gaactcagtg
      901 tcaagccatg agaaacaagg agcccccaag aagaggaagg caccccagcc tccagccagc
      961 acaccagttc ctgacgatcg ggatgcttat gaggagattg tacgcctgag acaagagaga
     1021 ggccggctcc tgcaaaagat caggggcctg gaacagcaca aggaacggag gaggaaggag
     1081 cccctggagg cggaggccag ctcagtgcac agcctggaga gacaggtgca ggagctgcaa
     1141 cagatgctgg cggagaagca ggaggagaag gagagcctgg gccgggaggt ggagagcctg
     1201 cagagccgtc tgtccctgct ggagaatgag agagaaaaca caagctatga tgtagctacc
     1261 ctgcaggatg aggagggtga gatgcctgac ttcccaggag ctgatgcact gatgccaaag
     1321 aaccagagtc catcagcaga ggaaatagtt gcttccctac aggagcaggt ggctcagctc
     1381 accaggcaga accaggagct gctggaaaag gtccagatcc ttgaggagtt tgaaaaggat
     1441 gaggcgcaga tggcagaaga aagtcaggcc gaggtcgtcc ccctggtctt gtatgaatcc
     1501 ttacgggcag agcttgagca gcttcggagg caatacacag aggccatgca ttcgcagcag
     1561 cagcagcagg agggggagcc acccagggct caagaaggag aagagacagc ataccaggaa
     1621 atcaaggata agggaatcac tatccagaat ggacccagcg tcccagacct caacggcacc
     1681 acatatgcag aaaccaaagc aaatggaatg gaactccaag caggaggctc caagggtgtc
     1741 tggaatactg aagcaggggt ttcagaagca gcacccatag aacccgaggc tgcaggttca
     1801 gaggccacgg ggaaagacag actggcagcc aaggaaatgg acactagtgc tactatggct
     1861 gaggccctaa atgtgaaagc tctaggtgac aatgccgaaa gtgagccagt ggctgccgaa
     1921 gatacaggag gaaaagagaa tccaggaatg aaagctgatg aggtggatgt gttggcacag
     1981 gcagggctca caggtacagt gattagaaac atggaggcca tcggagtgcg ggatacagga
     2041 attcaggcca caggattaga ggctaaggca gtgaagacca ctggagtgca ggccacagtg
     2101 gcggaggtca taggagtgaa ggtcacagga gtgcagacca cagcgataga agctatagga
     2161 gtcaaggaca ccacccaggt ggccacagga gcgcaggccg attgctggca ggccacggag
     2221 gcagactgca ccggagcgca ggacacagct atggagccca cgggggcaca ggccactgtg
     2281 acagagacta cggaagccga gaccagcggc acggaggacc cttgcgctgc gatcctgcac
     2341 ccgggggcgg cggcggcggc gctgcaggcc gagctggaga cccggatccg cggtctggag
     2401 gaggcgctac gcagaaggga gcgggaggct gcggccgagt tagaggctgc tcggggccgt
     2461 tttgcagagg ctgaggaggc ggcgcggggg cggagccgcg agctagaggc gcttcgggaa
     2521 ttgctggcca cggccacggc taccggcgag cgcgcacgca cagaggccgc cgagttgcgc
     2581 caagcgctag ctgcctccga ggctcgggtc gccgaactca gctctaccgt ggacgccgct
     2641 cgcgaggagc tggagcgcat gcgcggggcc tcggttcctg cggacgagca cgagcacgcg
     2701 ctgagcgccc tgcgcgacca cgtgacccgg ctgcaggcgc agctggcgga cctggcgcgc
     2761 aggcacgaga agactagcgc agaggtcttc cagatcacag acctgtccaa agaagtcttt
     2821 acactgaagg aggctctgaa ggtgcagcag tccaccccag ccagctccaa ggaggaggag
     2881 gctctgcgcg gccaggtgac agccctgcag cagcagatac aggaggaggc ccgggagcat
     2941 ggcgctgtgg tggctttata ccgcacccat ctcctgtatg ccattcaggg acagatggat
     3001 gaggatgtac agtgcatttt gagccagatt ctgcagatgc agcggcttca ggctcagggt
     3061 cgctgaggac acagctcaac tgttcagtct ccatccttca cctctacaag cagaagccac
     3121 agacaccatc ttccccagct cccaggggat gaacaagatt caacactcaa tgggagacca
     3181 gcctggggcc ttatcgatgg tggccagctg accaccccac actccctata gtctgttcct
     3241 ctgattccca gcactcccca tttgatatat tgggaaccct gatatgccac ctacatcaca
     3301 acccccactc aggaggacaa gcttggtgtg tgtatgtgtg tgtgtaaaag ggcggggggt
     3361 ggggtggggc aggaataccc agtgtgacac actgggtaag ggcagctatg gggcagggga
     3421 ctcaggacac agtttgatct tctggttcca taacacgact atggcaataa atgtaagtgc
     3481 aatgtaatat ttaaagaaa
//
