LOCUS       NM_026720               2155 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus ankyrin repeat domain 13 family, member D (Ankrd13d),
            mRNA.
ACCESSION   NM_026720 XM_129079
VERSION     NM_026720.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2155)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 2155)
  AUTHORS   Ingham,N.J., Pearson,S.A., Vancollie,V.E., Rook,V., Lewis,M.A.,
            Chen,J., Buniello,A., Martelletti,E., Preite,L., Lam,C.C.,
            Weiss,F.D., Powis,Z., Suwannarat,P., Lelliott,C.J., Dawson,S.J.,
            White,J.K. and Steel,K.P.
  TITLE     Mouse screen reveals multiple new genes underlying mouse and human
            hearing loss
  JOURNAL   PLoS Biol 17 (4), e3000194 (2019)
   PUBMED   30973865
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK155698.1 and BC058982.1.
            
            On Apr 6, 2007 this sequence version replaced NM_026720.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC058982.1, SRR17784643.343875.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-209               AK155698.1         2-210
            210-2155            BC058982.1         121-2066
FEATURES             Location/Qualifiers
     source          1..2155
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="19"
                     /map="19 3.96 cM"
     gene            1..2155
                     /gene="Ankrd13d"
                     /gene_synonym="0710001P18Rik"
                     /note="ankyrin repeat domain 13 family, member D"
                     /db_xref="GeneID:68423"
                     /db_xref="MGI:MGI:1915673"
     exon            1..257
                     /gene="Ankrd13d"
                     /gene_synonym="0710001P18Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             168..1985
                     /gene="Ankrd13d"
                     /gene_synonym="0710001P18Rik"
                     /codon_start=1
                     /product="ankyrin repeat domain-containing protein 13D"
                     /protein_id="NP_080996.2"
                     /db_xref="CCDS:CCDS50351.1"
                     /db_xref="GeneID:68423"
                     /db_xref="MGI:MGI:1915673"
                     /translation="MAGLGPTFPLHRLVWANRHRELEAALHSRKHDIEQEDPQGRTPL
                     ELAVTLGNLESVRVLLRHNANVGKESHQGWAVLQEAVSTGDPEMVQLVLQYRDFQRAT
                     QRLAGIPELLNKLRQAPDFYVEMKWEFTSWVPLVSKMCPSDVYRVWKRGESLRVDTSL
                     LGFEHMTWQRGRRSFIFRGQEAGALVMEVDHDRQVVHTETLAPALHEPEALLAAMRPS
                     EEHVASRLTSPIVSTHLDTRNVAFERNKCGIWGWRSEKMESVSGYEAKVYSATNVELV
                     TRTRTEHLSDQDKLRNKGGKTPFQSFLGMAQQHSSHTLAPVQQAASPTNPTAISAEEY
                     FDPSFSLESRNIGRPIEMSSKVQRFKATLWLSEEHPLSLGDQVTPIIDLMAISNAHFA
                     KLRDFITLRLPPGFPVKIEIPLFHVLNARITFSNLCGCDEPVSSVCVPNSSSAISASG
                     SPFPCEVDPTVFEVPEGYSVLGAERSEPLRDEDDDLLQFAIQQSLLEAGTEAEQVTVW
                     EALTNTRPGIHPPPRVTVFEEQLQLEQALQESLQLSTESRGPESPQKTPPSPAPPSFE
                     EQLRLALELSSREQEELERRGQQEEDDLQRILQLSLTEH"
     exon            258..393
                     /gene="Ankrd13d"
                     /gene_synonym="0710001P18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            394..518
                     /gene="Ankrd13d"
                     /gene_synonym="0710001P18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            519..564
                     /gene="Ankrd13d"
                     /gene_synonym="0710001P18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            565..708
                     /gene="Ankrd13d"
                     /gene_synonym="0710001P18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            709..898
                     /gene="Ankrd13d"
                     /gene_synonym="0710001P18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            899..965
                     /gene="Ankrd13d"
                     /gene_synonym="0710001P18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            966..1047
                     /gene="Ankrd13d"
                     /gene_synonym="0710001P18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1048..1109
                     /gene="Ankrd13d"
                     /gene_synonym="0710001P18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1110..1240
                     /gene="Ankrd13d"
                     /gene_synonym="0710001P18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1241..1398
                     /gene="Ankrd13d"
                     /gene_synonym="0710001P18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1399..1515
                     /gene="Ankrd13d"
                     /gene_synonym="0710001P18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1516..1679
                     /gene="Ankrd13d"
                     /gene_synonym="0710001P18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1680..1771
                     /gene="Ankrd13d"
                     /gene_synonym="0710001P18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1772..2141
                     /gene="Ankrd13d"
                     /gene_synonym="0710001P18Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2120..2125
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Ankrd13d"
                     /gene_synonym="0710001P18Rik"
                     /note="hexamer: AATAAA"
     polyA_site      2141
                     /gene="Ankrd13d"
                     /gene_synonym="0710001P18Rik"
                     /note="major polyA site"
ORIGIN      
        1 gccctccctg ccgccttcgc tcttgctgcg gcggcttcta gcaggggtcc gcggggctgc
       61 agcgggtgcg gctgaggtgc ggctcagagc ggaggagcag gggacgtgcc aggcgcaggc
      121 caagaagggc tgggcctttc gctcgggatg cggtgctgaa gcccagcatg gccggcctgg
      181 gccccacctt cccgctgcac cggctagtct gggcgaaccg gcaccgcgaa ctggaggccg
      241 cactgcacag ccgcaagcac gacattgagc aggaggaccc ccaagggcga acccccctgg
      301 agcttgctgt gaccttgggg aacttggagt ctgtgagagt cctcctccga cataatgcca
      361 acgtgggcaa agagagccac cagggctggg cagtcctgca ggaggcagtc agcactggag
      421 accctgagat ggtacagttg gtactccagt atcgggactt ccagagggcc acacagaggt
      481 tggctggcat tccagaactg ctcaacaaac tccgtcaggc ccctgatttc tacgtggaaa
      541 tgaaatggga gttcactagc tgggtacctc ttgtgtccaa gatgtgcccg agcgatgtgt
      601 accgtgtgtg gaagcggggt gagagtctgc gggtggacac tagtctcttg ggctttgagc
      661 acatgacctg gcagcgtggc cgaaggagct tcatcttcag gggtcaggag gcgggagcct
      721 tggtgatgga agtggatcat gaccggcagg tggtgcacac agagacccta gctccagctc
      781 tgcatgaacc agaagcgctg ctggctgcca tgcggcctag tgaggagcac gtggccagtc
      841 ggctcacctc tcctattgtc tccacccacc tggacactcg caatgtagcc tttgagagga
      901 acaaatgtgg tatctgggga tggcggtctg agaagatgga gtctgttagt ggctacgagg
      961 caaaggtgta cagtgccacc aatgtggagc tggtgacacg cacaagaaca gaacacctct
     1021 ctgaccagga caagttaagg aacaaagggg ggaagactcc attccagtcc ttcctgggca
     1081 tggcccagca gcactcctcc cacactttgg ctcccgtgca gcaggcagcc agccccacca
     1141 accctacagc tatctctgct gaggaatact ttgaccccag cttcagcctg gaatccagaa
     1201 acattggccg ccccattgag atgtctagca aagtgcagag gttcaaggca acactgtggc
     1261 taagtgagga gcacccactg tccttgggtg accaggtgac acccatcatt gacctgatgg
     1321 ccatcagcaa cgctcatttt gccaagctac gggatttcat cactctgcgt ctcccaccag
     1381 gcttccctgt caagattgag attcccctct tccatgtgct caatgcccgc atcaccttca
     1441 gtaacctttg cggctgtgat gagcctgtga gctcggtgtg cgtccccaac tccagttctg
     1501 ccatttctgc ttcaggaagc ccttttccat gtgaggtgga ccccactgta ttcgaggtgc
     1561 ccgagggata cagtgtgctg ggtgctgagc gcagcgagcc ccttcgggat gaggatgacg
     1621 acctgctgca gtttgccatc cagcagagcc tgcttgaggc aggcacagag gcagagcagg
     1681 tgacggtgtg ggaagccctg accaacacac ggcctggcat tcaccctcct ccccgagtca
     1741 cagtgtttga agagcagctt cagttggagc aggccctgca ggaaagccta cagctgtcca
     1801 cagagtccag gggtccagaa tctcctcaga agacacctcc atcccctgca cccccaagct
     1861 ttgaggagca gcttcgcctg gccctggagt tgtcttcaag ggaacaggag gagttggagc
     1921 gacggggtca gcaggaagaa gacgacttac agcggatcct gcagctgtca ctcacagagc
     1981 actgagttgc ctggccttgg gacggctccc cagggccatg ccttctgcct ggttttgtaa
     2041 tttatttatt tataaactgt ctgctgctga gcttgggacc tgggcactga agataggcta
     2101 gcagtgagac tgaggtggaa ataaagagac catcagcagt aaaaaaaaaa aaaaa
//
