LOCUS       NM_001369169            2301 bp    mRNA    linear   ROD 04-APR-2024
DEFINITION  Mus musculus ankyrin repeat and death domain containing 1B
            (Ankdd1b), transcript variant 1, mRNA.
ACCESSION   NM_001369169
VERSION     NM_001369169.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2301)
  AUTHORS   Diez-Roux,G., Banfi,S., Sultan,M., Geffers,L., Anand,S., Rozado,D.,
            Magen,A., Canidio,E., Pagani,M., Peluso,I., Lin-Marq,N., Koch,M.,
            Bilio,M., Cantiello,I., Verde,R., De Masi,C., Bianchi,S.A.,
            Cicchini,J., Perroud,E., Mehmeti,S., Dagand,E., Schrinner,S.,
            Nurnberger,A., Schmidt,K., Metz,K., Zwingmann,C., Brieske,N.,
            Springer,C., Hernandez,A.M., Herzog,S., Grabbe,F., Sieverding,C.,
            Fischer,B., Schrader,K., Brockmeyer,M., Dettmer,S., Helbig,C.,
            Alunni,V., Battaini,M.A., Mura,C., Henrichsen,C.N.,
            Garcia-Lopez,R., Echevarria,D., Puelles,E., Garcia-Calero,E.,
            Kruse,S., Uhr,M., Kauck,C., Feng,G., Milyaev,N., Ong,C.K.,
            Kumar,L., Lam,M., Semple,C.A., Gyenesei,A., Mundlos,S., Radelof,U.,
            Lehrach,H., Sarmientos,P., Reymond,A., Davidson,D.R., Dolle,P.,
            Antonarakis,S.E., Yaspo,M.L., Martinez,S., Baldock,R.A., Eichele,G.
            and Ballabio,A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC125534.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN00849376,
                              SAMN00849389 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-280               AC125534.4         167885-168164       c
            281-384             AC125534.4         162239-162342       c
            385-483             AC125534.4         157760-157858       c
            484-582             AC125534.4         151728-151826       c
            583-687             AC125534.4         151517-151621       c
            688-786             AC125534.4         142734-142832       c
            787-885             AC125534.4         141224-141322       c
            886-984             AC125534.4         138502-138600       c
            985-1083            AC125534.4         132818-132916       c
            1084-1182           AC125534.4         130247-130345       c
            1183-1281           AC125534.4         126731-126829       c
            1282-1377           AC125534.4         121678-121773       c
            1378-1579           AC125534.4         117665-117866       c
            1580-1711           AC125534.4         116610-116741       c
            1712-2301           AC125534.4         114256-114845       c
FEATURES             Location/Qualifiers
     source          1..2301
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="13"
                     /map="13 50.56 cM"
     gene            1..2301
                     /gene="Ankdd1b"
                     /gene_synonym="9330128J19Rik"
                     /note="ankyrin repeat and death domain containing 1B"
                     /db_xref="GeneID:271144"
                     /db_xref="MGI:MGI:2444730"
     exon            1..280
                     /gene="Ankdd1b"
                     /gene_synonym="9330128J19Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             109..1773
                     /gene="Ankdd1b"
                     /gene_synonym="9330128J19Rik"
                     /note="isoform 1 is encoded by transcript variant 1;
                     ankyrin repeat and death domain-containing protein
                     ENSP00000345065 homolog; ankyrin repeat and death
                     domain-containing protein 1B"
                     /codon_start=1
                     /product="ankyrin repeat and death domain-containing
                     protein 1B isoform 1"
                     /protein_id="NP_001356098.1"
                     /db_xref="CCDS:CCDS88501.1"
                     /db_xref="GeneID:271144"
                     /db_xref="MGI:MGI:2444730"
                     /translation="MNPESAQGHGARAPMLQAARGLKANLRDVATRPWRSLARMPKPE
                     VQDPETAAAGHEGLLAIERSFQNAAKSSNLDLMEKLFEKKVNINAVNNMNRTALHFAV
                     GRNSLSAVDFLLSHKARVDVADKHGLTVIHLAAWSGSFEIMLMLVKAGADQRAKNQEG
                     MNALHLAAQNNNLHIVDYLIHDLHLHDLNQPNERGRKPFHLAAERGHVEMIEKLIFLN
                     LHTSEKDKDGNTALHLAAMHGHSPAVQVLLTQWSEVNESNENGETPFLLAVVGGHEEC
                     SRVLLAGGSDVNIPNKLNVSALQTATRNGHTALVNFLLGENADLQQQKESKEPPLHLA
                     VINNRPAVVNSLLSARHDVDVLDQRRQTPLHVAADLGNVELVETLLKAGCNLKITDKQ
                     GKTALAVAARSQHSLVVDMLIKAERYYAWREEHRESIQDSAVSSTLTFKQDHSLETRQ
                     IRTLLWNLAYRQLKKKDWQRLARLWSFTEDQIRAIEEQWSGNDSFHEHGYRALLIWLH
                     GALLTQLDPAKQLYEELLCAGFPELAEKIRQFKSKTDSSSKKCAVS"
     exon            281..384
                     /gene="Ankdd1b"
                     /gene_synonym="9330128J19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            385..483
                     /gene="Ankdd1b"
                     /gene_synonym="9330128J19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            484..582
                     /gene="Ankdd1b"
                     /gene_synonym="9330128J19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            583..687
                     /gene="Ankdd1b"
                     /gene_synonym="9330128J19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            688..786
                     /gene="Ankdd1b"
                     /gene_synonym="9330128J19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            787..885
                     /gene="Ankdd1b"
                     /gene_synonym="9330128J19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            886..984
                     /gene="Ankdd1b"
                     /gene_synonym="9330128J19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            985..1083
                     /gene="Ankdd1b"
                     /gene_synonym="9330128J19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1084..1182
                     /gene="Ankdd1b"
                     /gene_synonym="9330128J19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1183..1281
                     /gene="Ankdd1b"
                     /gene_synonym="9330128J19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1282..1377
                     /gene="Ankdd1b"
                     /gene_synonym="9330128J19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1378..1579
                     /gene="Ankdd1b"
                     /gene_synonym="9330128J19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1580..1711
                     /gene="Ankdd1b"
                     /gene_synonym="9330128J19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1712..2301
                     /gene="Ankdd1b"
                     /gene_synonym="9330128J19Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtgcctagcc attggctcca aagagagcag gctcagtcct gcgctcctgc gtggcgcatt
       61 tgcagtccag ctccacacct tagtggggtc cctacagcaa gggtgaccat gaaccctgag
      121 agtgcccagg gccacggagc gagggctccg atgctccagg cagccagggg cctaaaggcc
      181 aacctgaggg atgtagccac cagaccctgg aggagcctgg ccaggatgcc gaagccggag
      241 gtgcaggacc cggagacagc agctgcagga catgagggct tgctggcaat cgagaggagc
      301 tttcagaatg ctgctaaaag cagtaatttg gatcttatgg agaagctgtt tgaaaagaag
      361 gtgaacatta atgctgtgaa caatatgaac cgcacagccc tgcactttgc cgtggggagg
      421 aatagtttat ctgcagtgga tttcttactg agtcacaaag ccagggtgga tgttgctgac
      481 aagcatggtt tgacagtcat tcacctggca gcctggtctg gaagcttcga gatcatgctc
      541 atgctagtta aagctggagc agaccagaga gccaagaacc aggaaggaat gaacgctctc
      601 cacttggcag ctcagaacaa caacctgcac attgtggact acctcattca cgacttgcac
      661 ctgcacgacc tgaaccagcc caatgagaga ggaagaaaac catttcattt ggcagctgag
      721 aggggccacg ttgaaatgat tgaaaagctt atcttcctta atctccatac ctcagaaaaa
      781 gacaaggatg ggaacacggc cttgcacctg gctgcaatgc acggtcacag cccagccgtg
      841 caagtgctac taactcagtg gtcagaagtc aatgagagca atgagaatgg agaaacccca
      901 ttcctgttgg ctgttgtggg aggtcatgaa gaatgcagtc gcgtgctcct ggcaggagga
      961 agtgatgtca acattccaaa caaactcaat gtcagtgcct tgcagacagc gacccggaac
     1021 ggccacacag cccttgtcaa ctttcttctc ggtgagaatg ctgatttgca gcagcagaag
     1081 gaatctaagg agccccctct tcacctagca gttatcaaca accgccccgc agtcgtgaac
     1141 agcttactaa gtgctcggca tgatgttgat gtcttagatc agaggcggca gacccctctg
     1201 cacgtagctg ctgatcttgg aaatgtggag ctggtggaga cactgctgaa ggctggctgc
     1261 aacctgaaaa tcactgacaa gcaaggaaag actgccctgg cggtggctgc caggagccag
     1321 cacagcctcg tcgtggatat gctgatcaaa gctgagaggt actacgcctg gagagaggag
     1381 caccgtgaga gcatccagga ctcagcagtg agctctacac tgacgttcaa gcaggaccat
     1441 agtctggaga ccaggcaaat ccgcacactg ctctggaacc tggcctatcg gcagctgaaa
     1501 aagaaagact ggcagaggct ggcccgcttg tggagtttta cagaggacca gatcagagcc
     1561 attgaggaac agtggtcagg taatgacagc ttccatgagc atggctacag ggctctgctc
     1621 atctggctgc acggggctct gctgacacag ctggaccctg ccaagcagtt gtatgaggag
     1681 ctgttgtgtg caggattccc agaactagct gaaaagattc ggcagttcaa aagcaaaact
     1741 gactcaagct ccaagaaatg tgcagtctcc taagctgaag aacactccaa taactttcct
     1801 ctcttccttc agtgttggtt cctgatggcc acagccatcc tgcaactgac tgattttcca
     1861 gtacagagac aatgcccctc cagggatgca catggacaca ccacccctcc actgctccag
     1921 tctacacaga gtctttgcct ttttcttgag gcaaactgtg tgtgacttcc ccgctgtcat
     1981 ttggtgcaca catggaacac cctagctgaa agggctctgt ccatgaagtg acactgagat
     2041 cagagtggtg gctcctggga agcaggggct aggagatgct gctctgataa tggactcttg
     2101 gatgtgcgca tgtcaatatg actgaagtgc tcataattag ctgcttcctt cctgatagac
     2161 aggatgtttt ctccagagac tgcagtgtgg atgagggaaa cacccgtgag tgcttgacct
     2221 ccagctatgg tatgtaagcc atgagctctc atcgctgtag agaaagtgcg tttggaaatt
     2281 catcactgct ggctttatac c
//
