LOCUS       NM_001370871            2116 bp    mRNA    linear   ROD 06-AUG-2023
DEFINITION  Mus musculus ankyrin repeat and death domain containing 1A
            (Ankdd1a), mRNA.
ACCESSION   NM_001370871 XM_006511594
VERSION     NM_001370871.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2116)
  AUTHORS   Skarnes WC, Rosen B, West AP, Koutsourakis M, Bushell W, Iyer V,
            Mujica AO, Thomas M, Harrow J, Cox T, Jackson D, Severin J, Biggs
            P, Fu J, Nefedov M, de Jong PJ, Stewart AF and Bradley A.
  TITLE     A conditional knockout resource for the genome-wide study of mouse
            gene function
  JOURNAL   Nature 474 (7351), 337-342 (2011)
   PUBMED   21677750
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2116)
  AUTHORS   Katayama S, Tomaru Y, Kasukawa T, Waki K, Nakanishi M, Nakamura M,
            Nishida H, Yap CC, Suzuki M, Kawai J, Suzuki H, Carninci P,
            Hayashizaki Y, Wells C, Frith M, Ravasi T, Pang KC, Hallinan J,
            Mattick J, Hume DA, Lipovich L, Batalov S, Engstrom PG, Mizuno Y,
            Faghihi MA, Sandelin A, Chalk AM, Mottagui-Tabar S, Liang Z,
            Lenhard B and Wahlestedt C.
  CONSRTM   RIKEN Genome Exploration Research Group; Genome Science Group
            (Genome Network Project Core Group); FANTOM Consortium
  TITLE     Antisense transcription in the mammalian transcriptome
  JOURNAL   Science 309 (5740), 1564-1566 (2005)
   PUBMED   16141073
REFERENCE   3  (bases 1 to 2116)
  AUTHORS   Carninci P, Kasukawa T, Katayama S, Gough J, Frith MC, Maeda N,
            Oyama R, Ravasi T, Lenhard B, Wells C, Kodzius R, Shimokawa K,
            Bajic VB, Brenner SE, Batalov S, Forrest AR, Zavolan M, Davis MJ,
            Wilming LG, Aidinis V, Allen JE, Ambesi-Impiombato A, Apweiler R,
            Aturaliya RN, Bailey TL, Bansal M, Baxter L, Beisel KW, Bersano T,
            Bono H, Chalk AM, Chiu KP, Choudhary V, Christoffels A, Clutterbuck
            DR, Crowe ML, Dalla E, Dalrymple BP, de Bono B, Della Gatta G, di
            Bernardo D, Down T, Engstrom P, Fagiolini M, Faulkner G, Fletcher
            CF, Fukushima T, Furuno M, Futaki S, Gariboldi M, Georgii-Hemming
            P, Gingeras TR, Gojobori T, Green RE, Gustincich S, Harbers M,
            Hayashi Y, Hensch TK, Hirokawa N, Hill D, Huminiecki L, Iacono M,
            Ikeo K, Iwama A, Ishikawa T, Jakt M, Kanapin A, Katoh M, Kawasawa
            Y, Kelso J, Kitamura H, Kitano H, Kollias G, Krishnan SP, Kruger A,
            Kummerfeld SK, Kurochkin IV, Lareau LF, Lazarevic D, Lipovich L,
            Liu J, Liuni S, McWilliam S, Madan Babu M, Madera M, Marchionni L,
            Matsuda H, Matsuzawa S, Miki H, Mignone F, Miyake S, Morris K,
            Mottagui-Tabar S, Mulder N, Nakano N, Nakauchi H, Ng P, Nilsson R,
            Nishiguchi S, Nishikawa S, Nori F, Ohara O, Okazaki Y, Orlando V,
            Pang KC, Pavan WJ, Pavesi G, Pesole G, Petrovsky N, Piazza S, Reed
            J, Reid JF, Ring BZ, Ringwald M, Rost B, Ruan Y, Salzberg SL,
            Sandelin A, Schneider C, Schonbach C, Sekiguchi K, Semple CA, Seno
            S, Sessa L, Sheng Y, Shibata Y, Shimada H, Shimada K, Silva D,
            Sinclair B, Sperling S, Stupka E, Sugiura K, Sultana R, Takenaka Y,
            Taki K, Tammoja K, Tan SL, Tang S, Taylor MS, Tegner J, Teichmann
            SA, Ueda HR, van Nimwegen E, Verardo R, Wei CL, Yagi K, Yamanishi
            H, Zabarovsky E, Zhu S, Zimmer A, Hide W, Bult C, Grimmond SM,
            Teasdale RD, Liu ET, Brusic V, Quackenbush J, Wahlestedt C, Mattick
            JS, Hume DA, Kai C, Sasaki D, Tomaru Y, Fukuda S, Kanamori-Katayama
            M, Suzuki M, Aoki J, Arakawa T, Iida J, Imamura K, Itoh M, Kato T,
            Kawaji H, Kawagashira N, Kawashima T, Kojima M, Kondo S, Konno H,
            Nakano K, Ninomiya N, Nishio T, Okada M, Plessy C, Shibata K,
            Shiraki T, Suzuki S, Tagami M, Waki K, Watahiki A, Okamura-Oho Y,
            Suzuki H, Kawai J and Hayashizaki Y.
  CONSRTM   FANTOM Consortium; RIKEN Genome Exploration Research Group and
            Genome Science Group (Genome Network Project Core Group)
  TITLE     The transcriptional landscape of the mammalian genome
  JOURNAL   Science 309 (5740), 1559-1563 (2005)
   PUBMED   16141072
  REMARK    Erratum:[Science. 2006 Mar 24;311(5768):1713]
REFERENCE   4  (bases 1 to 2116)
  AUTHORS   Zambrowicz BP, Abuin A, Ramirez-Solis R, Richter LJ, Piggott J,
            BeltrandelRio H, Buxton EC, Edwards J, Finch RA, Friddle CJ, Gupta
            A, Hansen G, Hu Y, Huang W, Jaing C, Key BW Jr, Kipp P, Kohlhauff
            B, Ma ZQ, Markesich D, Payne R, Potter DG, Qian N, Shaw J, Schrick
            J, Shi ZZ, Sparks MJ, Van Sligtenhorst I, Vogel P, Walke W, Xu N,
            Zhu Q, Person C and Sands AT.
  TITLE     Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap
            screen to identify potential targets for therapeutic intervention
  JOURNAL   Proc Natl Acad Sci U S A 100 (24), 14109-14114 (2003)
   PUBMED   14610273
REFERENCE   5  (bases 1 to 2116)
  AUTHORS   Okazaki Y, Furuno M, Kasukawa T, Adachi J, Bono H, Kondo S, Nikaido
            I, Osato N, Saito R, Suzuki H, Yamanaka I, Kiyosawa H, Yagi K,
            Tomaru Y, Hasegawa Y, Nogami A, Schonbach C, Gojobori T, Baldarelli
            R, Hill DP, Bult C, Hume DA, Quackenbush J, Schriml LM, Kanapin A,
            Matsuda H, Batalov S, Beisel KW, Blake JA, Bradt D, Brusic V,
            Chothia C, Corbani LE, Cousins S, Dalla E, Dragani TA, Fletcher CF,
            Forrest A, Frazer KS, Gaasterland T, Gariboldi M, Gissi C, Godzik
            A, Gough J, Grimmond S, Gustincich S, Hirokawa N, Jackson IJ,
            Jarvis ED, Kanai A, Kawaji H, Kawasawa Y, Kedzierski RM, King BL,
            Konagaya A, Kurochkin IV, Lee Y, Lenhard B, Lyons PA, Maglott DR,
            Maltais L, Marchionni L, McKenzie L, Miki H, Nagashima T, Numata K,
            Okido T, Pavan WJ, Pertea G, Pesole G, Petrovsky N, Pillai R,
            Pontius JU, Qi D, Ramachandran S, Ravasi T, Reed JC, Reed DJ, Reid
            J, Ring BZ, Ringwald M, Sandelin A, Schneider C, Semple CA, Setou
            M, Shimada K, Sultana R, Takenaka Y, Taylor MS, Teasdale RD, Tomita
            M, Verardo R, Wagner L, Wahlestedt C, Wang Y, Watanabe Y, Wells C,
            Wilming LG, Wynshaw-Boris A, Yanagisawa M, Yang I, Yang L, Yuan Z,
            Zavolan M, Zhu Y, Zimmer A, Carninci P, Hayatsu N,
            Hirozane-Kishikawa T, Konno H, Nakamura M, Sakazume N, Sato K,
            Shiraki T, Waki K, Kawai J, Aizawa K, Arakawa T, Fukuda S, Hara A,
            Hashizume W, Imotani K, Ishii Y, Itoh M, Kagawa I, Miyazaki A,
            Sakai K, Sasaki D, Shibata K, Shinagawa A, Yasunishi A, Yoshino M,
            Waterston R, Lander ES, Rogers J, Birney E and Hayashizaki Y.
  CONSRTM   FANTOM Consortium; RIKEN Genome Exploration Research Group Phase I
            & II Team
  TITLE     Analysis of the mouse transcriptome based on functional annotation
            of 60,770 full-length cDNAs
  JOURNAL   Nature 420 (6915), 563-573 (2002)
   PUBMED   12466851
REFERENCE   6  (bases 1 to 2116)
  AUTHORS   Kawai J, Shinagawa A, Shibata K, Yoshino M, Itoh M, Ishii Y,
            Arakawa T, Hara A, Fukunishi Y, Konno H, Adachi J, Fukuda S, Aizawa
            K, Izawa M, Nishi K, Kiyosawa H, Kondo S, Yamanaka I, Saito T,
            Okazaki Y, Gojobori T, Bono H, Kasukawa T, Saito R, Kadota K,
            Matsuda H, Ashburner M, Batalov S, Casavant T, Fleischmann W,
            Gaasterland T, Gissi C, King B, Kochiwa H, Kuehl P, Lewis S, Matsuo
            Y, Nikaido I, Pesole G, Quackenbush J, Schriml LM, Staubli F,
            Suzuki R, Tomita M, Wagner L, Washio T, Sakai K, Okido T, Furuno M,
            Aono H, Baldarelli R, Barsh G, Blake J, Boffelli D, Bojunga N,
            Carninci P, de Bonaldo MF, Brownstein MJ, Bult C, Fletcher C,
            Fujita M, Gariboldi M, Gustincich S, Hill D, Hofmann M, Hume DA,
            Kamiya M, Lee NH, Lyons P, Marchionni L, Mashima J, Mazzarelli J,
            Mombaerts P, Nordone P, Ring B, Ringwald M, Rodriguez I, Sakamoto
            N, Sasaki H, Sato K, Schonbach C, Seya T, Shibata Y, Storch KF,
            Suzuki H, Toyo-oka K, Wang KH, Weitz C, Whittaker C, Wilming L,
            Wynshaw-Boris A, Yoshida K, Hasegawa Y, Kawaji H, Kohtsuki S and
            Hayashizaki Y.
  CONSRTM   RIKEN Genome Exploration Research Group Phase II Team and the
            FANTOM Consortium
  TITLE     Functional annotation of a full-length mouse cDNA collection
  JOURNAL   Nature 409 (6821), 685-690 (2001)
   PUBMED   11217851
REFERENCE   7  (bases 1 to 2116)
  AUTHORS   Shibata K, Itoh M, Aizawa K, Nagaoka S, Sasaki N, Carninci P, Konno
            H, Akiyama J, Nishi K, Kitsunai T, Tashiro H, Itoh M, Sumi N, Ishii
            Y, Nakamura S, Hazama M, Nishine T, Harada A, Yamamoto R, Matsumoto
            H, Sakaguchi S, Ikegami T, Kashiwagi K, Fujiwake S, Inoue K and
            Togawa Y.
  TITLE     RIKEN integrated sequence analysis (RISA) system--384-format
            sequencing pipeline with 384 multicapillary sequencer
  JOURNAL   Genome Res 10 (11), 1757-1771 (2000)
   PUBMED   11076861
REFERENCE   8  (bases 1 to 2116)
  AUTHORS   Carninci P, Shibata Y, Hayatsu N, Sugahara Y, Shibata K, Itoh M,
            Konno H, Okazaki Y, Muramatsu M and Hayashizaki Y.
  TITLE     Normalization and subtraction of cap-trapper-selected cDNAs to
            prepare full-length cDNA libraries for rapid discovery of new genes
  JOURNAL   Genome Res 10 (10), 1617-1630 (2000)
   PUBMED   11042159
REFERENCE   9  (bases 1 to 2116)
  AUTHORS   Carninci P and Hayashizaki Y.
  TITLE     High-efficiency full-length cDNA cloning
  JOURNAL   Methods Enzymol 303, 19-44 (1999)
   PUBMED   10349636
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC114645.9.
            
            On Jun 8, 2019 this sequence version replaced XM_006511594.3.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMN00849374, SAMN00849375
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-60                AC114645.9         7415-7474
            61-164              AC114645.9         10639-10742
            165-263             AC114645.9         12889-12987
            264-362             AC114645.9         14879-14977
            363-467             AC114645.9         17202-17306
            468-566             AC114645.9         17890-17988
            567-665             AC114645.9         18913-19011
            666-764             AC114645.9         19504-19602
            765-863             AC114645.9         19920-20018
            864-962             AC114645.9         22404-22502
            963-1061            AC114645.9         23045-23143
            1062-1157           AC114645.9         23446-23541
            1158-1362           AC114645.9         24064-24268
            1363-1494           AC114645.9         25318-25449
            1495-2116           AC114645.9         38542-39163
FEATURES             Location/Qualifiers
     source          1..2116
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="9"
                     /map="9 35.35 cM"
     gene            1..2116
                     /gene="Ankdd1a"
                     /gene_synonym="A730067D02; A730067D02Rik; EG330963;
                     Gm1473"
                     /note="ankyrin repeat and death domain containing 1A"
                     /db_xref="GeneID:330963"
                     /db_xref="MGI:MGI:2686319"
     exon            1..60
                     /gene="Ankdd1a"
                     /gene_synonym="A730067D02; A730067D02Rik; EG330963;
                     Gm1473"
                     /inference="alignment:Splign:2.1.0"
     CDS             27..1586
                     /gene="Ankdd1a"
                     /gene_synonym="A730067D02; A730067D02Rik; EG330963;
                     Gm1473"
                     /codon_start=1
                     /product="ankyrin repeat and death domain-containing
                     protein 1A"
                     /protein_id="NP_001357800.1"
                     /db_xref="GeneID:330963"
                     /db_xref="MGI:MGI:2686319"
                     /translation="MEEELAWETHGLLPLERQLHEASRWNQVERMKELFEKRVNIRAR
                     NHVGRVALHWAAGAGHEQAVRLLLERGAAVDDVDSFGMNSLLLSAWFGHLQIVQILVN
                     AGAKVHCESKDGLTLLHCAAQKGHVPVLAFVMEDLEDVALDHADKLGRTAFHRAAEHG
                     QLDALDFLVGSGCDHSVKDKGGNTALHLAASQGHVDVLQRLVDIGLDLEEQNTEGLTA
                     LHAAAEGIHADCVMLLLGAGSNVNALTQKRLSCLHYAALGGSEDLSRALIKAGGCTNV
                     ADKQGTTPMHLAVKHNFPGLVQLLIDGHSDLDAVDIRRQTPLHLAAEHAWQDVADMLL
                     IAGADLSLRDKQGKTALAVAARSNHVSLVDMIIKADRFYRWEKDHLSCRDGSDVSRKN
                     LTFKQDHRQETQQLRSVLWRLASRYLRPNEWKKLAYSWQFTEAHVCAIEQQWTGTRSY
                     QEHGHRMLLIWLHGVAAAGENPSKALFEGLVAIGRRDLADLWCSENPTKLLMNQSHGH
                     LQSVTYFSIQL"
     exon            61..164
                     /gene="Ankdd1a"
                     /gene_synonym="A730067D02; A730067D02Rik; EG330963;
                     Gm1473"
                     /inference="alignment:Splign:2.1.0"
     exon            165..263
                     /gene="Ankdd1a"
                     /gene_synonym="A730067D02; A730067D02Rik; EG330963;
                     Gm1473"
                     /inference="alignment:Splign:2.1.0"
     exon            264..362
                     /gene="Ankdd1a"
                     /gene_synonym="A730067D02; A730067D02Rik; EG330963;
                     Gm1473"
                     /inference="alignment:Splign:2.1.0"
     exon            363..467
                     /gene="Ankdd1a"
                     /gene_synonym="A730067D02; A730067D02Rik; EG330963;
                     Gm1473"
                     /inference="alignment:Splign:2.1.0"
     exon            468..566
                     /gene="Ankdd1a"
                     /gene_synonym="A730067D02; A730067D02Rik; EG330963;
                     Gm1473"
                     /inference="alignment:Splign:2.1.0"
     exon            567..665
                     /gene="Ankdd1a"
                     /gene_synonym="A730067D02; A730067D02Rik; EG330963;
                     Gm1473"
                     /inference="alignment:Splign:2.1.0"
     exon            666..764
                     /gene="Ankdd1a"
                     /gene_synonym="A730067D02; A730067D02Rik; EG330963;
                     Gm1473"
                     /inference="alignment:Splign:2.1.0"
     exon            765..863
                     /gene="Ankdd1a"
                     /gene_synonym="A730067D02; A730067D02Rik; EG330963;
                     Gm1473"
                     /inference="alignment:Splign:2.1.0"
     exon            864..962
                     /gene="Ankdd1a"
                     /gene_synonym="A730067D02; A730067D02Rik; EG330963;
                     Gm1473"
                     /inference="alignment:Splign:2.1.0"
     exon            963..1061
                     /gene="Ankdd1a"
                     /gene_synonym="A730067D02; A730067D02Rik; EG330963;
                     Gm1473"
                     /inference="alignment:Splign:2.1.0"
     exon            1062..1157
                     /gene="Ankdd1a"
                     /gene_synonym="A730067D02; A730067D02Rik; EG330963;
                     Gm1473"
                     /inference="alignment:Splign:2.1.0"
     exon            1158..1362
                     /gene="Ankdd1a"
                     /gene_synonym="A730067D02; A730067D02Rik; EG330963;
                     Gm1473"
                     /inference="alignment:Splign:2.1.0"
     exon            1363..1494
                     /gene="Ankdd1a"
                     /gene_synonym="A730067D02; A730067D02Rik; EG330963;
                     Gm1473"
                     /inference="alignment:Splign:2.1.0"
     exon            1495..2116
                     /gene="Ankdd1a"
                     /gene_synonym="A730067D02; A730067D02Rik; EG330963;
                     Gm1473"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcctagcacc agccgggagc tgcaggatgg aggaggagct ggcttgggag acccacggct
       61 tgcttcccct ggagagacag ctccatgagg cctcccgctg gaatcaggtg gagaggatga
      121 aggagctgtt tgagaagaga gttaacatca gggctagaaa ccatgtgggc agagtggccc
      181 tacactgggc tgcaggtgct gggcacgagc aggctgtgcg gctgctcctg gagcgtgggg
      241 ctgctgtgga cgacgtggac tcgtttggaa tgaactcact cctcctgtct gcctggtttg
      301 gccacttgca gattgtgcag atcctggtca atgctggggc caaggtccac tgtgaaagca
      361 aggatggcct gaccttacta cactgtgctg ctcagaaagg ccacgtgcct gtgctggcct
      421 tcgtcatgga agacctagag gatgtggcct tggaccatgc agacaagctg ggaagaacag
      481 cgtttcacag agcggctgag cacggacagc tggatgctct ggacttcctc gtgggctctg
      541 gctgtgacca cagtgtcaag gacaagggtg ggaacacggc cctgcacctg gctgccagcc
      601 agggccatgt ggatgtgcta cagagacttg tggacattgg gctcgatctg gaagaacaga
      661 acacggaggg cctgacggct ctgcatgcag ccgctgaagg gatccatgct gactgtgtga
      721 tgcttctcct cggtgctggg agcaacgtga atgccctcac ccagaaaagg ctgagctgcc
      781 tccactacgc agccctcggt ggctctgagg acctgtcccg ggcactcatt aaggcaggag
      841 ggtgcacaaa tgtggctgac aagcagggca ccactcctat gcaccttgct gtgaagcaca
      901 acttccctgg ccttgtccag ctcctcatag atggccacag tgatctggac gcagtggaca
      961 ttaggcggca gactcccctc caccttgccg ctgagcacgc ctggcaggat gtagccgata
     1021 tgcttctcat tgctggagct gacttaagcc tgagagataa gcaaggaaaa acagccctgg
     1081 cagtagctgc ccgtagcaac catgtcagcc tggtggacat gatcataaaa gctgatcgtt
     1141 tctaccgatg ggagaaggac cacctttcat gcagggatgg cagcgacgtc tctaggaaga
     1201 acttaacctt taagcaagac catcgtcagg aaacgcagca gctccgctcc gtgctttggc
     1261 gactggcctc ccggtatcta aggcccaatg agtggaagaa actggcctat tcctggcagt
     1321 tcacggaggc tcatgtctgt gccattgagc aacagtggac aggaactagg agctaccagg
     1381 agcatggtca ccggatgctg ctcatctggc tgcatggtgt ggccgcagct ggggagaacc
     1441 ccagcaaagc actgttcgag ggcctcgtgg ccattggcag gagagacttg gctgatctct
     1501 ggtgttcgga gaaccccact aagctcctga tgaatcaatc ccatggtcac ctgcagtcag
     1561 ttacttactt cagtatacag ctgtaaacct gttgctttga agcagccatc ttcctgccaa
     1621 gagtcttggt ttctatttaa ggaggggggg ggcggtgttc cttatggatc tggaactcac
     1681 agtgtggacc aggctggcct catggtcaca gacaccttcc tgcttctgct gtgctaacga
     1741 ttaaaggtat gcactaccat gccagcttat ttagaattta ctatgtgtgt atgaccatgg
     1801 gcatgtacat gtgtcagcac acacatgcaa ggcagaggac aatgtgtaga catggttctc
     1861 ttcttccact gtggtttctg ggggttgaag acaggttatc aggctggtgt gacaagggct
     1921 tttacctgct gaaccatctt gctggcccaa gatttttgtt ttttatggtt atagttaaga
     1981 tattaatttt ttctagcttt atgtcaataa tttcccataa gtgttaattt tttcaaaatg
     2041 ttaattatag ctttctatat gtgtgtatat tgtataaatt ttctactatg tgaactgaat
     2101 aaaacccctt acatat
//
