LOCUS       NM_001347451            1381 bp    mRNA    linear   ROD 12-JUN-2024
DEFINITION  Mus musculus anaphase promoting complex subunit 16 (Anapc16),
            transcript variant 2, mRNA.
ACCESSION   NM_001347451 XM_006513888
VERSION     NM_001347451.2
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1381)
  AUTHORS   Ferguson,C.J., Urso,O., Bodrug,T., Gassaway,B.M., Watson,E.R.,
            Prabu,J.R., Lara-Gonzalez,P., Martinez-Chacin,R.C., Wu,D.Y.,
            Brigatti,K.W., Puffenberger,E.G., Taylor,C.M., Haas-Givler,B.,
            Jinks,R.N., Strauss,K.A., Desai,A., Gabel,H.W., Gygi,S.P.,
            Schulman,B.A., Brown,N.G. and Bonni,A.
  TITLE     APC7 mediates ubiquitin signaling in constitutive heterochromatin
            in the developing mammalian brain
  JOURNAL   Mol Cell 82 (1), 90-105 (2022)
   PUBMED   34942119
REFERENCE   2  (bases 1 to 1381)
  AUTHORS   Taniwaki,T., Haruna,K., Nakamura,H., Sekimoto,T., Oike,Y.,
            Imaizumi,T., Saito,F., Muta,M., Soejima,Y., Utoh,A., Nakagata,N.,
            Araki,M., Yamamura,K. and Araki,K.
  TITLE     Characterization of an exchangeable gene trap using pU-17 carrying
            a stop codon-beta geo cassette
  JOURNAL   Dev Growth Differ 47 (3), 163-172 (2005)
   PUBMED   15840001
REFERENCE   3  (bases 1 to 1381)
  AUTHORS   Sharov,A.A., Piao,Y., Matoba,R., Dudekula,D.B., Qian,Y.,
            VanBuren,V., Falco,G., Martin,P.R., Stagg,C.A., Bassey,U.C.,
            Wang,Y., Carter,M.G., Hamatani,T., Aiba,K., Akutsu,H., Sharova,L.,
            Tanaka,T.S., Kimber,W.L., Yoshikawa,T., Jaradat,S.A., Pantano,S.,
            Nagaraja,R., Boheler,K.R., Taub,D., Hodes,R.J., Longo,D.L.,
            Schlessinger,D., Keller,J., Klotz,E., Kelsoe,G., Umezawa,A.,
            Vescovi,A.L., Rossant,J., Kunath,T., Hogan,B.L., Curci,A.,
            D'Urso,M., Kelso,J., Hide,W. and Ko,M.S.
  TITLE     Transcriptome analysis of mouse stem cells and early embryos
  JOURNAL   PLoS Biol 1 (3), E74 (2003)
   PUBMED   14691545
REFERENCE   4  (bases 1 to 1381)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
REFERENCE   5  (bases 1 to 1381)
  AUTHORS   Bryda,E.C., Kim,H.J., Legare,M.E., Frankel,W.N. and Noben-Trauth,K.
  TITLE     High-resolution genetic and physical mapping of
            modifier-of-deafwaddler (mdfw) and Waltzer (Cdh23v)
  JOURNAL   Genomics 73 (3), 338-342 (2001)
   PUBMED   11350126
REFERENCE   6  (bases 1 to 1381)
  AUTHORS   Araki,K., Imaizumi,T., Sekimoto,T., Yoshinobu,K., Yoshimuta,J.,
            Akizuki,M., Miura,K., Araki,M. and Yamamura,K.
  TITLE     Exchangeable gene trap using the Cre/mutated lox system
  JOURNAL   Cell Mol Biol (Noisy-le-grand) 45 (5), 737-750 (1999)
   PUBMED   10512203
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC154040.7.
            
            On Jan 12, 2022 this sequence version replaced NM_001347451.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR5189685.109129.1, FO709007.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849380,
                                           SAMN00849381 [ECO:0006172]
            ##Evidence-Data-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-158               AC154040.7         88000-88157
            159-208             AC154040.7         88646-88695
            209-375             AC154040.7         94499-94665
            376-450             AC154040.7         100206-100280
            451-1381            AC154040.7         102275-103205
FEATURES             Location/Qualifiers
     source          1..1381
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="10"
                     /map="10 29.66 cM"
     gene            1..1381
                     /gene="Anapc16"
                     /gene_synonym="2310005G07Rik; APC16; D10Ertd641e"
                     /note="anaphase promoting complex subunit 16"
                     /db_xref="GeneID:52717"
                     /db_xref="MGI:MGI:1289325"
     exon            1..158
                     /gene="Anapc16"
                     /gene_synonym="2310005G07Rik; APC16; D10Ertd641e"
                     /inference="alignment:Splign:2.1.0"
     exon            159..208
                     /gene="Anapc16"
                     /gene_synonym="2310005G07Rik; APC16; D10Ertd641e"
                     /inference="alignment:Splign:2.1.0"
     CDS             177..566
                     /gene="Anapc16"
                     /gene_synonym="2310005G07Rik; APC16; D10Ertd641e"
                     /note="isoform 2 is encoded by transcript variant 2;
                     cyclosome subunit 16"
                     /codon_start=1
                     /product="anaphase-promoting complex subunit 16 isoform 2"
                     /protein_id="NP_001334380.1"
                     /db_xref="CCDS:CCDS83700.1"
                     /db_xref="GeneID:52717"
                     /db_xref="MGI:MGI:1289325"
                     /translation="MSARSSLSYTNEERLLLEGMAASSSSSSAGGVSGSSVTGSGFSV
                     SDLAPPRKALFTYPKGAGEMLEDGSERFLCESVFSYQVASTLKQVKHDQQVARMEKLA
                     GLVEELEADEWRFKPIEQLLGFTPSSG"
     exon            209..375
                     /gene="Anapc16"
                     /gene_synonym="2310005G07Rik; APC16; D10Ertd641e"
                     /inference="alignment:Splign:2.1.0"
     exon            376..450
                     /gene="Anapc16"
                     /gene_synonym="2310005G07Rik; APC16; D10Ertd641e"
                     /inference="alignment:Splign:2.1.0"
     exon            451..1381
                     /gene="Anapc16"
                     /gene_synonym="2310005G07Rik; APC16; D10Ertd641e"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1359..1364
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Anapc16"
                     /gene_synonym="2310005G07Rik; APC16; D10Ertd641e"
                     /note="hexamer: AATAAA"
     polyA_site      1381
                     /gene="Anapc16"
                     /gene_synonym="2310005G07Rik; APC16; D10Ertd641e"
                     /note="major polyA site"
ORIGIN      
        1 ctctagccct caccgccgca gggacaggcg cagcaccgcc atcaaactcc cacagctcag
       61 gcgggcgcgc gcacgccgcc gtctacgtcg tggcgagcga ggccgcacgg cttcgtccaa
      121 ggggcggggc tgtcagtcaa agtgcacaag ctgctgagac tataagcgga aagtttatga
      181 gtgcgaggtc gtccctgtcg tacacaaatg aagagagact tctactggag ggaatggccg
      241 cctcctcgtc ttcgtcttca gctggtgggg tcagtggaag ctctgtcacc ggatctggtt
      301 tcagtgtgtc cgaccttgcc ccacctcgga aagctctgtt cacctacccg aaaggagctg
      361 gagagatgtt agaagatggc tccgagcgat tcctctgtga gtcggtgttt agctatcaag
      421 tggcatccac gcttaaacag gtgaagcatg atcagcaagt cgctcggatg gaaaaactgg
      481 ctggtctggt ggaagagctg gaggccgacg agtggcggtt taaacccatc gagcagctgc
      541 tggggttcac accctcctcg ggctgatgtt gcctgcacga ccacccttag ggcacagcca
      601 cccagggagt cacagctgtc ctgtgagctg catgtctgaa tccacatcca tacttggtgt
      661 ctccaattct gctaataggc aacaagtgct catgtgagat gtcgcggaga tgtttttcac
      721 attcatgttc tttaaagcat tgggcagcac ttgggaagca gaggcaggag gatctctgtg
      781 agtttgaggc tagcctggtc tacataagag ttccaggaca gccagggcta tgagacactg
      841 tctcaaaata aataaataaa taaataaata aataaataaa aagaagtatt ggggatcaga
      901 tggagacagt cctttcagag aaccaggagg cttgggatct aggaaacact gattctcaca
      961 agccaaatgg acacatgcca gagtcagcca actgaatgga ggatgtcctg tcattcagag
     1021 gctgtctgga agctttcacc agccaagccc aaggtcagca tctgtcgttt cacggtcaca
     1081 gcccaaacat ttctcttcac acatgaatgt ggtttcagct cagggtccgt ccagatggga
     1141 gctgtaaagt gtcctttccc tctctgttct tagacattta acattacaga ctatttcttt
     1201 cacctctcac gacatgccaa atgtgctact ccacctcact ctgcccccca agattgcttt
     1261 ttgaatgttg cagcacttga aaatatgaag tgacctaaat ccttttgaac cccgaagtct
     1321 tagtccggct tacagggtat gaaagcagtt ctgtggcaaa taaaccctta cacgaggtcc
     1381 a
//
