LOCUS       NM_001038230            3384 bp    mRNA    linear   ROD 03-JUN-2024
DEFINITION  Mus musculus anaphase promoting complex subunit 11 (Anapc11),
            transcript variant 1, mRNA.
ACCESSION   NM_001038230
VERSION     NM_001038230.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3384)
  AUTHORS   Ray,J.P., Staron,M.M., Shyer,J.A., Ho,P.C., Marshall,H.D.,
            Gray,S.M., Laidlaw,B.J., Araki,K., Ahmed,R., Kaech,S.M. and
            Craft,J.
  TITLE     The Interleukin-2-mTORc1 Kinase Axis Defines the Signaling,
            Differentiation, and Metabolism of T Helper 1 and Follicular B
            Helper T Cells
  JOURNAL   Immunity 43 (4), 690-702 (2015)
   PUBMED   26410627
REFERENCE   2  (bases 1 to 3384)
  AUTHORS   Wiese,C.B., Ireland,S., Fleming,N.L., Yu,J., Valerius,M.T.,
            Georgas,K., Chiu,H.S., Brennan,J., Armstrong,J., Little,M.H.,
            McMahon,A.P. and Southard-Smith,E.M.
  TITLE     A genome-wide screen to identify transcription factors expressed in
            pelvic Ganglia of the lower urinary tract
  JOURNAL   Front Neurosci 6, 130 (2012)
   PUBMED   22988430
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 3384)
  AUTHORS   Naoe,H., Araki,K., Nagano,O., Kobayashi,Y., Ishizawa,J.,
            Chiyoda,T., Shimizu,T., Yamamura,K., Sasaki,Y., Saya,H. and
            Kuninaka,S.
  TITLE     The anaphase-promoting complex/cyclosome activator Cdh1 modulates
            Rho GTPase by targeting p190 RhoGAP for degradation
  JOURNAL   Mol Cell Biol 30 (16), 3994-4005 (2010)
   PUBMED   20530197
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL663030.12, BY285612.1 and AA269705.1.
            
            On Sep 15, 2009 this sequence version replaced NM_001038230.1.
            
            Transcript Variant: This variant (1) represents the longer
            transcript. Both variants 1 and 2 encode the same protein.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BU558806.1, BC023039.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-87                AL663030.12        54346-54432
            88-281              BY285612.1         2-195
            282-557             AA269705.1         108-383
            558-3384            AL663030.12        61186-64012
FEATURES             Location/Qualifiers
     source          1..3384
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 84.32 cM"
     gene            1..3384
                     /gene="Anapc11"
                     /gene_synonym="1110011I19Rik"
                     /note="anaphase promoting complex subunit 11"
                     /db_xref="GeneID:66156"
                     /db_xref="MGI:MGI:1913406"
     exon            1..339
                     /gene="Anapc11"
                     /gene_synonym="1110011I19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            340..466
                     /gene="Anapc11"
                     /gene_synonym="1110011I19Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             358..612
                     /gene="Anapc11"
                     /gene_synonym="1110011I19Rik"
                     /note="APC11; cyclosome subunit 11; anaphase promoting
                     complex subunit 11 homolog"
                     /codon_start=1
                     /product="anaphase-promoting complex subunit 11"
                     /protein_id="NP_001033319.1"
                     /db_xref="CCDS:CCDS25745.1"
                     /db_xref="GeneID:66156"
                     /db_xref="MGI:MGI:1913406"
                     /translation="MKVKIKCWNGVATWLWVANDENCGICRMAFNGCCPDCKVPGDDC
                     PLVWGQCSHCFHMHCILKWLNAQQVQQHCPMCRQEWKFKE"
     exon            467..3384
                     /gene="Anapc11"
                     /gene_synonym="1110011I19Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      840..845
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Anapc11"
                     /gene_synonym="1110011I19Rik"
                     /note="hexamer: AGTAAA"
     polyA_site      862
                     /gene="Anapc11"
                     /gene_synonym="1110011I19Rik"
                     /note="major polyA site"
     regulatory      941..946
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Anapc11"
                     /gene_synonym="1110011I19Rik"
                     /note="hexamer: AATAAA"
     polyA_site      959
                     /gene="Anapc11"
                     /gene_synonym="1110011I19Rik"
ORIGIN      
        1 ggcgcggtcg tttttataca ttcccgcgcg gaggcaacgg aagggcgggg cgcctcgtga
       61 ttaggccgcg gaggtgcgag ggcgagcagg gggcggggcc tgcgggcgcc tccctgggag
      121 gccggaagat cctcgggcgt cgcctgggtg cagcgcagtg tgcgcgtccc gcgtccctcc
      181 tcaccgtgcg atcgtggggg tcccggccgg tccgtgggtc cgacttggtt gtttttgctc
      241 gaaggctcgg tctcctgacg agctggcgtc ctcacccctg ctttaacttc gcggattagt
      301 gacagtcact ctttccatat ctttaaaagc gaggccctgg tcacaggctc tgttgtcatg
      361 aaggtgaaaa ttaaatgttg gaatggtgtg gccacttggc tctgggtagc caatgatgag
      421 aactgcggca tctgcaggat ggcgtttaat ggctgctgtc cagactgtaa ggtgcctggt
      481 gatgactgcc ccctcgtgtg gggacagtgc tcccactgct tccacatgca ctgcatcctc
      541 aagtggctga atgcgcagca ggtgcagcag cactgcccca tgtgtcgcca ggagtggaag
      601 ttcaaagagt gaagcccgtg ccgtgccact tccctctcct gtgctgtgcc aggctcagcc
      661 ccttccctcc ctcccctccc ccagatacag caccccaagt cccctccaca cagcacagtg
      721 gtgcccagag atctcggtct gtgccgggga caaggatgct ttctgtttgg ctgggacaag
      781 gttgaaagga gctttgctga ctgttttgtt ttcccatcac attgacactt tattcaataa
      841 gtaaaactca ttacagttcc gagccgtgct ggaggcctct gcttgcctgg tttcttgaca
      901 tactgatgct gctagcagca tgttttgcta tgaaaactcc aataaacagc ttgatgaaat
      961 aatggccaaa accttcatcg taatctgagt cacagctcag acaggaggag gaggagagat
     1021 tcaggcagag ccaagctggg caaagacctt agggtgtgtt tgtgtcaagg agacaggcag
     1081 ggtgcacgta gcccatcagc tgccctagtc tactgggagt cccgagatct cgtcccatcc
     1141 ccagccctag ctgagcaaag ctggcagctg ctcttccaga gctatttggt tggaggaaga
     1201 aatagctaag caggcagtgg tcattcatgt ccagataatc ttcggggaca actgcagcaa
     1261 gcttttcagt ctcttgtgtc ttccttggat gaaggcagat atagtgtagg aggatgtggg
     1321 tcctctggtg tcttagggaa ggaaggccat ttggaaacta ttattattcc ctagagctag
     1381 ggattaccag ttatcaggaa aacagtagcc cagccctgat gtgttaagct cctgggtaga
     1441 aaccaattta ggctggcatc taggagttct ggccaactta ccaccttgtc ctcactctct
     1501 gactcttccc agtaacacct ctgcactccc tgtgtgctcc acagccgggg aagtagacta
     1561 ctaggggctg gttccaagca atctggatca tctacatgtt tgttggctct gagacttgtt
     1621 gcccactgtg tgtggtatca ctgaagtcct cctatttgaa gcagacttgt gcttctggga
     1681 gactagaatt tcataccact tggctatctc tagcatgcta atcctggaac tggcacagct
     1741 atcaggagtg aagagggcca tttcaggggt aaggaccccc aagagctgca gaggggagcc
     1801 aggattggtg gatttggaag tccttgagct gacaggtatg gtgtaccctg gcttgttcag
     1861 cttgtgcctt ccatctccag tctgctcatt ttcttggagg gtcctccatg cctcttctag
     1921 gaacattctc tgggacttca ttccgggcca tcctctctga aacaacttcc tgtgcagttg
     1981 gcagtgctcc tgagtgcttc tgttcccggg ctaacctcag aatccttcat ggccttcact
     2041 taccactgag gttcttcctg gtgtgttgtc tcacggtgtc agcagccttt cctcagggtc
     2101 aactccaccc atgtagcatg tccgctctct agagatgaga aagccataac taaccttggg
     2161 ctgcttgcaa atgggacccc tggctcctcc ccttcctact ccattgttct tccaccagct
     2221 ttctccagaa aagtcaggac agcaatgtac cgagcactgc agcttgtgct cagcctaagc
     2281 cccttttcca tgtgggagca ggaggccttg gaggaggaag cctacaccac tgacctcagg
     2341 aagctctctc tgctctaatc cacctgtgcc tgccctgggt ggccagacac agtcctattc
     2401 atgttctggc tcctgcacat accacaagtc tcttacatgt taccctcctg tgtccagtat
     2461 tcgagtcact gtttgctaag tacaggtggg gacggttcct aggccatacc cactggtgta
     2521 gcgtgggcag ggcagttact tgcccctagg gtccagagtt gcttgcccag gcttttctga
     2581 aggttggagc ctgagcgcaa cacttctcct cagaaagggc aagcccagca tcagagtctt
     2641 ccaccgtgag caccacacca aaacaactcc aaccttgttg cattggcaag atgagttatt
     2701 ttctccaagt tcgaggccaa tataggttat agagtgagac cctgttggtg agcctagaca
     2761 ggaccaaaga ataagcaagg cccctgtggt ggctgatgtt atgttaactt gatgtgaact
     2821 agagtcctct gagaggcgtg atcctcagtt gggaaaatgc ctccgtaaga tcaggctgag
     2881 ggcaggcctg taggacattt tctttcttcc tctttataat gtctttacat tttatgtgtg
     2941 tggatgtttt gcctgcaagc gtttctgtgc atacatgcat tctcccagtg cctatagagg
     3001 ccagaagaag gcatctgacc cctggaacta gagttccaga cagatgtgaa ctgccctgtg
     3061 agccacctgc gcatggtact gggaatccaa cctgtgtcct ctggaacagc agttagtgct
     3121 tttaactgtt gagccatctc tccagcttgg aaaaatcaat tagcgaatga tgagggaggg
     3181 cccagcagat tttgagtggt gctatccctg ggctggtgat cctggttcgg taaaaaagca
     3241 ggctgaggaa gccctgagag taagcagcac ccctccatgg cccctgcatc agcttccacc
     3301 tcggtcccat tggagttcct gccttggctt tctacagcgg actgtgactc aggatatgta
     3361 aaccaaataa accctttcct cccc
//
