LOCUS       NM_001113424            1027 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus antagonist of mitotic exit network 1 (Amn1),
            transcript variant 1, mRNA.
ACCESSION   NM_001113424 XM_901291
VERSION     NM_001113424.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1027)
  AUTHORS   Georgas,K., Rumballe,B., Valerius,M.T., Chiu,H.S.,
            Thiagarajan,R.D., Lesieur,E., Aronow,B.J., Brunskill,E.W.,
            Combes,A.N., Tang,D., Taylor,D., Grimmond,S.M., Potter,S.S.,
            McMahon,A.P. and Little,M.H.
  TITLE     Analysis of early nephron patterning reveals a role for distal RV
            proliferation in fusion to the ureteric tip via a cap
            mesenchyme-derived connecting segment
  JOURNAL   Dev Biol 332 (2), 273-286 (2009)
   PUBMED   19501082
REFERENCE   2  (bases 1 to 1027)
  AUTHORS   McClintock,T.S., Glasser,C.E., Bose,S.C. and Bergman,D.A.
  TITLE     Tissue expression patterns identify mouse cilia genes
  JOURNAL   Physiol Genomics 32 (2), 198-206 (2008)
   PUBMED   17971504
  REMARK    GeneRIF: C730024G19Rik is most abundantly expressed in tissues rich
            in highly ciliated cells, such as olfactory sensory neurons, and is
            predicted to be important to cilia.
REFERENCE   3  (bases 1 to 1027)
  AUTHORS   Fyfe,J.C., Madsen,M., Hojrup,P., Christensen,E.I., Tanner,S.M., de
            la Chapelle,A., He,Q. and Moestrup,S.K.
  TITLE     The functional cobalamin (vitamin B12)-intrinsic factor receptor is
            a novel complex of cubilin and amnionless
  JOURNAL   Blood 103 (5), 1573-1579 (2004)
   PUBMED   14576052
REFERENCE   4  (bases 1 to 1027)
  AUTHORS   COFFEY,J.W., HANSEN,H.J. and MILLER,O.N.
  TITLE     STUDIES ON THE INTERACTION OF VITAMIN B12: INTRINSIC FACTOR AND
            RECEPTORS. 3. CHEMICAL AND BIOLOGICAL PROPERTIES OF VITAMIN B12
            COMBINING SUBSTANCES FROM THE STOMACH, SERUM, AND ASCITES FLUID OF
            THE MOUSE
  JOURNAL   Arch Biochem Biophys 110, 117-123 (1965)
   PUBMED   14321840
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC128664.3 and AC132412.2.
            
            On Jan 12, 2008 this sequence version replaced XM_901291.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR5189682.144250.1, DV073336.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849382, SAMN01164131
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-107               AC128664.3         58752-58858         c
            108-240             AC128664.3         55138-55270         c
            241-385             AC128664.3         53540-53684         c
            386-603             AC132412.2         165539-165756       c
            604-660             AC132412.2         164154-164210       c
            661-772             AC132412.2         161512-161623       c
            773-1027            AC132412.2         152283-152537       c
FEATURES             Location/Qualifiers
     source          1..1027
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="6"
                     /map="6 78.81 cM"
     gene            1..1027
                     /gene="Amn1"
                     /gene_synonym="5830467E07Rik; A230083D09; C730024G19Rik"
                     /note="antagonist of mitotic exit network 1"
                     /db_xref="GeneID:232566"
                     /db_xref="MGI:MGI:2442933"
     exon            1..107
                     /gene="Amn1"
                     /gene_synonym="5830467E07Rik; A230083D09; C730024G19Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             70..846
                     /gene="Amn1"
                     /gene_synonym="5830467E07Rik; A230083D09; C730024G19Rik"
                     /note="isoform 1 is encoded by transcript variant 1;
                     antagonist of mitotic exit network 1 homolog; protein AMN1
                     homolog"
                     /codon_start=1
                     /product="protein AMN1 homolog isoform 1"
                     /protein_id="NP_001106895.1"
                     /db_xref="CCDS:CCDS51961.1"
                     /db_xref="GeneID:232566"
                     /db_xref="MGI:MGI:2442933"
                     /translation="MPLSGVVSQLLELCLQYLVINISRYISDIKYLPSNIKDRLIKIM
                     SIRGRITDSNISEVLHPEVQRLDLRSCDISDVALQHLCKCRKLKALNLKSCREHRNSI
                     TSEGIKAVASSCSDLHEIYLKGCCSVTDEGVLALALNCHLLKIIDLGGCLGITDVSLH
                     ALGKNCPFLQCVDISTTQVSDNGVVALVSGPCAKQLEEINMRYCINLTDKAVEAALTA
                     CPRICILLFHGCPLITDRSQEVLEQLIGSRKLKQVTWSVY"
     exon            108..240
                     /gene="Amn1"
                     /gene_synonym="5830467E07Rik; A230083D09; C730024G19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            241..385
                     /gene="Amn1"
                     /gene_synonym="5830467E07Rik; A230083D09; C730024G19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            386..603
                     /gene="Amn1"
                     /gene_synonym="5830467E07Rik; A230083D09; C730024G19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            604..660
                     /gene="Amn1"
                     /gene_synonym="5830467E07Rik; A230083D09; C730024G19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            661..772
                     /gene="Amn1"
                     /gene_synonym="5830467E07Rik; A230083D09; C730024G19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            773..1027
                     /gene="Amn1"
                     /gene_synonym="5830467E07Rik; A230083D09; C730024G19Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1002..1007
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Amn1"
                     /gene_synonym="5830467E07Rik; A230083D09; C730024G19Rik"
                     /note="hexamer: AACAAG"
     polyA_site      1023
                     /gene="Amn1"
                     /gene_synonym="5830467E07Rik; A230083D09; C730024G19Rik"
                     /note="major polyA site"
ORIGIN      
        1 agtcctgcgc gaccggaagt tggttgtgga gggccgcaac tgccgtccag gcttaagagg
       61 gcttccgcga tgcctttgtc cggagtagtc agtcagctcc tggaactatg tcttcagtac
      121 ctagtaatca atatttccag atatatatca gatattaaat atttgccttc caacattaaa
      181 gatagactaa ttaaaataat gagcattcgg ggtcggataa cagattccaa tataagtgag
      241 gtgttacatc ctgaagttca aagactagat ctgaggagct gtgatatctc agatgtggct
      301 ctccagcacc tgtgtaagtg cagaaaactg aaggcactaa atctaaaatc ctgcagagaa
      361 catagaaata gcataacttc agaaggaata aaagctgtgg cttcatcctg ttcagacctt
      421 catgaaattt atttgaaagg atgttgcagt gtcactgatg aaggagtcct tgctcttgca
      481 ctcaattgtc atctgctaaa gatcattgat ttgggtggct gcttaggtat tactgatgtg
      541 tccttacatg cattaggaaa aaactgccca tttctgcagt gtgttgacat ttcaactacg
      601 caggtatctg acaatggtgt ggttgcactt gttagtggac catgtgccaa acaattagag
      661 gagattaaca tgagatactg tataaatcta actgataagg ctgtagaagc tgctctgact
      721 gcatgtcctc ggatatgtat acttcttttc catggctgcc ccctgataac agatcgttca
      781 caagaagtct tggagcaatt aataggatca agaaaactaa agcaagtgac ttggtctgtt
      841 tattgatctt taccgaggct gatctcaaaa ccttgcacag gatttgcgct ataaatattt
      901 atttattact taatttaaca ccaatttact attgtcttag ttaagctgtg actctcagag
      961 aatctattca atcttactgt aaatatttgt gctataaagt taacaagact caacatttaa
     1021 acacttc
//
