LOCUS       NM_025442               1471 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus ALG5 dolichyl-phosphate beta-glucosyltransferase
            (Alg5), mRNA.
ACCESSION   NM_025442 XM_913329 XM_922717
VERSION     NM_025442.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1471)
  AUTHORS   Pan,J., Mor,G., Ju,W., Zhong,J., Luo,X., Aldo,P.B., Zhong,M.,
            Yu,Y., Jenkins,E.C., Brown,W.T. and Zhong,N.
  TITLE     Viral Infection-Induced Differential Expression of LncRNAs
            Associated with Collagen in Mouse Placentas and Amniotic Sacs
  JOURNAL   Am J Reprod Immunol 74 (3), 237-257 (2015)
   PUBMED   26073538
REFERENCE   2  (bases 1 to 1471)
  AUTHORS   Garcia-Garcia,M.J., Eggenschwiler,J.T., Caspary,T., Alcorn,H.L.,
            Wyler,M.R., Huangfu,D., Rakeman,A.S., Lee,J.D., Feinberg,E.H.,
            Timmer,J.R. and Anderson,K.V.
  TITLE     Analysis of mouse embryonic patterning and morphogenesis by forward
            genetics
  JOURNAL   Proc Natl Acad Sci U S A 102 (17), 5913-5919 (2005)
   PUBMED   15755804
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC100927.11.
            
            On Apr 29, 2007 this sequence version replaced NM_025442.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK005296.1, BY705475.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-111               AC100927.11        100307-100417
            112-283             AC100927.11        103550-103721
            284-330             AC100927.11        104030-104076
            331-399             AC100927.11        106147-106215
            400-492             AC100927.11        106915-107007
            493-606             AC100927.11        109366-109479
            607-666             AC100927.11        109875-109934
            667-818             AC100927.11        111234-111385
            819-904             AC100927.11        113376-113461
            905-1471            AC100927.11        113997-114563
FEATURES             Location/Qualifiers
     source          1..1471
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="3"
                     /map="3 25.6 cM"
     gene            1..1471
                     /gene="Alg5"
                     /gene_synonym="1500026A19Rik; 2600005J22Rik"
                     /note="ALG5 dolichyl-phosphate beta-glucosyltransferase"
                     /db_xref="GeneID:66248"
                     /db_xref="MGI:MGI:1913498"
     exon            1..111
                     /gene="Alg5"
                     /gene_synonym="1500026A19Rik; 2600005J22Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             46..1020
                     /gene="Alg5"
                     /gene_synonym="1500026A19Rik; 2600005J22Rik"
                     /EC_number="2.4.1.117"
                     /note="dolP-glucosyltransferase; asparagine-linked
                     glycosylation protein 5 homolog; Alg5 homolog;
                     asparagine-linked glycosylation 5 homolog (yeast,
                     dolichyl-phosphate beta-glucosyltransferase);
                     asparagine-linked glycosylation 5 (dolichyl-phosphate
                     beta-glucosyltransferase)"
                     /codon_start=1
                     /product="dolichyl-phosphate beta-glucosyltransferase"
                     /protein_id="NP_079718.1"
                     /db_xref="CCDS:CCDS17353.1"
                     /db_xref="GeneID:66248"
                     /db_xref="MGI:MGI:1913498"
                     /translation="MATLLLQLLGLGVALAAAALILVSIVAFITATKMPPCYQHEEEK
                     FFLNAKGQKEALPSIWDSPTKQLSVVVPSYNEEKRLPVMMDEALNYLEKRQKHDCTFT
                     YEVIVVDDGSEDQTSKVALKYCQKYGSDKVRVITLVRNRGKGGAVRMGVFSSRGEKIL
                     MADADGATKFPDVEKLEKGLSDLQPWPEQMAIACGSRAHLEKESIAQRSYFRTFLMYG
                     FHFLVWFLCVKGIRDTQCGFKLLTREAAARTFSSLHIERWAFDVELLYIAQCLQIPIA
                     EVAVNWTEIEGSKLVPFWSWLQMGKDLLFIRLRYLTGAWRLKQTRKAS"
     exon            112..283
                     /gene="Alg5"
                     /gene_synonym="1500026A19Rik; 2600005J22Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            284..330
                     /gene="Alg5"
                     /gene_synonym="1500026A19Rik; 2600005J22Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            331..399
                     /gene="Alg5"
                     /gene_synonym="1500026A19Rik; 2600005J22Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            400..492
                     /gene="Alg5"
                     /gene_synonym="1500026A19Rik; 2600005J22Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            493..606
                     /gene="Alg5"
                     /gene_synonym="1500026A19Rik; 2600005J22Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            607..666
                     /gene="Alg5"
                     /gene_synonym="1500026A19Rik; 2600005J22Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            667..818
                     /gene="Alg5"
                     /gene_synonym="1500026A19Rik; 2600005J22Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            819..904
                     /gene="Alg5"
                     /gene_synonym="1500026A19Rik; 2600005J22Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            905..1471
                     /gene="Alg5"
                     /gene_synonym="1500026A19Rik; 2600005J22Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1084..1089
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Alg5"
                     /gene_synonym="1500026A19Rik; 2600005J22Rik"
                     /note="hexamer: AATAAA"
     polyA_site      1113
                     /gene="Alg5"
                     /gene_synonym="1500026A19Rik; 2600005J22Rik"
                     /note="major polyA site"
     regulatory      1445..1450
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Alg5"
                     /gene_synonym="1500026A19Rik; 2600005J22Rik"
                     /note="hexamer: AATAAA"
     polyA_site      1471
                     /gene="Alg5"
                     /gene_synonym="1500026A19Rik; 2600005J22Rik"
ORIGIN      
        1 ggggcgcggc gccgcaccgc gcttccgcaa gtgtggagct gcgggatggc tacgctgcta
       61 ctgcagctgc tggggctcgg cgtggcgctg gcggctgccg cgctcattct ggtttccatt
      121 gtggcgttta taactgctac aaaaatgcca ccatgttacc aacatgagga agagaaattc
      181 ttcctcaatg ccaaaggcca gaaggaagct ctccccagca tctgggactc gcctacgaaa
      241 cagctatctg ttgttgtgcc ttcctacaat gaagagaaac ggttgcctgt gatgatggat
      301 gaagccctga actacctaga aaagagacag aaacatgatt gtacgttcac gtatgaggtg
      361 atagtggttg acgatggcag tgaagaccag acgtcaaagg tcgctttaaa atactgccag
      421 aaatacggaa gtgacaaagt ccgggtgata acgctggtgc ggaaccgtgg gaaaggtggt
      481 gctgttagga tgggtgtatt cagttcccga ggagagaaga tcctcatggc agatgctgac
      541 ggagccacaa agtttccaga tgttgagaaa ttagaaaagg ggctgagtga tctacagcca
      601 tggcctgagc aaatggctat tgcatgtggg tctcgagctc atctggagaa agaatcgatt
      661 gctcagcgct cttacttccg tacctttctt atgtacggat tccatttcct ggtgtggttc
      721 ctctgtgtca aaggaatcag ggacacacag tgcgggttca aattactgac ccgagaagca
      781 gcagcccgga ccttctcgtc tctgcacatt gaacgatggg catttgatgt agagctgctg
      841 tacatagcac agtgtcttca aatcccaata gcagaagttg ctgtcaactg gacagaaatt
      901 gagggttcta agttagttcc attctggagc tggctacaaa tgggcaaaga cctgcttttc
      961 atccgacttc ggtatctgac gggtgcctgg aggctcaagc aaacacggaa agcgagttag
     1021 ttgctggcag ggctggactg catttttatc ccacatgcaa tttcacttga aatcaagatt
     1081 ttcaataaag cctcgatggg cctgttctca gtatctgcct ttgtatattc ttgagaatta
     1141 actgctatga ggagaccacg tgatgtcttt tttttttaat atttgtgcca taagttagat
     1201 tttttaaaat ttatttattt agcagtctgt attttggctc ctgtcactta aggttctgag
     1261 atggacactt ggcgaccaaa gacagaagca gttttttttt aaggtaccca cacaattttt
     1321 acaatcatga ttaaatcaca accctgtaac agtcatttaa agatgaagtc ggctacgagt
     1381 taaaatacag gtttacctgt tgtcaaagag actttatttg tgacttggaa cactaggaaa
     1441 ctgtaataaa ggcatgactg agtctccagg c
//
