LOCUS       NM_145362               1772 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus ALG1 chitobiosyldiphosphodolichol
            beta-mannosyltransferase (Alg1), mRNA.
ACCESSION   NM_145362 XM_358907
VERSION     NM_145362.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1772)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 1772)
  AUTHORS   Pan,J., Mor,G., Ju,W., Zhong,J., Luo,X., Aldo,P.B., Zhong,M.,
            Yu,Y., Jenkins,E.C., Brown,W.T. and Zhong,N.
  TITLE     Viral Infection-Induced Differential Expression of LncRNAs
            Associated with Collagen in Mouse Placentas and Amniotic Sacs
  JOURNAL   Am J Reprod Immunol 74 (3), 237-257 (2015)
   PUBMED   26073538
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK145871.1 and BE948597.1.
            
            On May 23, 2007 this sequence version replaced NM_145362.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK145871.1, SRR1660819.179193.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1755              AK145871.1         1-1755
            1756-1772           BE948597.1         1-17                c
FEATURES             Location/Qualifiers
     source          1..1772
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="16"
                     /map="16 2.51 cM"
     gene            1..1772
                     /gene="Alg1"
                     /gene_synonym="HMAT1; HMT1"
                     /note="ALG1 chitobiosyldiphosphodolichol
                     beta-mannosyltransferase"
                     /db_xref="GeneID:208211"
                     /db_xref="MGI:MGI:2384774"
     exon            1..237
                     /gene="Alg1"
                     /gene_synonym="HMAT1; HMT1"
                     /inference="alignment:Splign:2.1.0"
     exon            238..315
                     /gene="Alg1"
                     /gene_synonym="HMAT1; HMT1"
                     /inference="alignment:Splign:2.1.0"
     exon            316..419
                     /gene="Alg1"
                     /gene_synonym="HMAT1; HMT1"
                     /inference="alignment:Splign:2.1.0"
     exon            420..568
                     /gene="Alg1"
                     /gene_synonym="HMAT1; HMT1"
                     /inference="alignment:Splign:2.1.0"
     exon            569..658
                     /gene="Alg1"
                     /gene_synonym="HMAT1; HMT1"
                     /inference="alignment:Splign:2.1.0"
     exon            659..769
                     /gene="Alg1"
                     /gene_synonym="HMAT1; HMT1"
                     /inference="alignment:Splign:2.1.0"
     exon            770..891
                     /gene="Alg1"
                     /gene_synonym="HMAT1; HMT1"
                     /inference="alignment:Splign:2.1.0"
     exon            892..930
                     /gene="Alg1"
                     /gene_synonym="HMAT1; HMT1"
                     /inference="alignment:Splign:2.1.0"
     exon            931..990
                     /gene="Alg1"
                     /gene_synonym="HMAT1; HMT1"
                     /inference="alignment:Splign:2.1.0"
     exon            991..1101
                     /gene="Alg1"
                     /gene_synonym="HMAT1; HMT1"
                     /inference="alignment:Splign:2.1.0"
     exon            1102..1216
                     /gene="Alg1"
                     /gene_synonym="HMAT1; HMT1"
                     /inference="alignment:Splign:2.1.0"
     exon            1217..1292
                     /gene="Alg1"
                     /gene_synonym="HMAT1; HMT1"
                     /inference="alignment:Splign:2.1.0"
     exon            1293..1759
                     /gene="Alg1"
                     /gene_synonym="HMAT1; HMT1"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1733..1738
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Alg1"
                     /gene_synonym="HMAT1; HMT1"
                     /note="hexamer: AATAAA"
     polyA_site      1756
                     /gene="Alg1"
                     /gene_synonym="HMAT1; HMT1"
                     /note="major polyA site"
ORIGIN      
        1 ggtcacgtgc tcggcgccgg ccggccaaga tggcagcgtc ctgcgtggcg ctgctggttc
       61 tggcgctgct gttgctggtg ctgctgctgg gcttgtggaa gcgtgggcgg caaacgggca
      121 gggcccggca catggtcgtc gtggtgctgg gcgacgtggg ccgcagcccc cgcatgcagt
      181 accacgcgct gtcattggcc cagagcggct tttcggtgac gctgctgggg ttctacaact
      241 ccaaacctcg agatgaactc ttgcagaatg ataggattcg gattgtgaag ttgacagatc
      301 tgcggggcct gggagctggg ccccgaattc tccagtatgg agtcaaggtt gtatttcagg
      361 cagtgtactt gctgtggaag atgatgcgca tggaccctgc agcctacatc ttcctccaga
      421 accctccagg tctgcctgct attgccgtct gctggtttgt gggctgcatt tgtgggagca
      481 aattggtcat cgactggcac aactatggct actccatcat gggcttggtc catggccccc
      541 gccaccccat tgtgctgctg gccaaatggt atgagaagtt cttcgggcgc ctgtcccacc
      601 tgaacctgtg tgtgaccaat gctatgcggg aggacctggc agagaactgg tgtgtcaggg
      661 ctgtgacgct ctacgacaag ccagcatctt tctttaagga gacacccctg gacctgcagc
      721 atgaactctt tatgaagctg agccacacgt actctccttt ccagagctgc tcagatccct
      781 cacatcctga cacagagagg tcggccttca ctgagaggga ttgtcagagc ggggttgtga
      841 ggcgtctgca tgggcggcca gcactgctcg tgagcagcac aagctggaca gaggacgagg
      901 acttctccat cctgcttcga gcattagaaa agtttgagca acaagcactc actggagaca
      961 gcctcccttc cctcgtctgt gtgataacag ggaagggacc gctcagagag cactaccgcc
     1021 acctcatcag ccagaagcac cttcagcacg tccggttctg caccccatgg ctggaagccg
     1081 aggactaccc actgcttcta gggtcagcgg atctgggtgt ctgtctacac atgtcctcca
     1141 gtggtctgga cctgcccatg aaggtggtgg acatgtttgg gtgccacttg cctgtgtgtg
     1201 ccgtgaactt caagtgtctg cacgagctag taagacatgg agagaatggt ctggtcttca
     1261 aggatgctga ggagctggca gctcagctgc agatgctttt ctcaaagttc ccagaccctg
     1321 ctggaaagct aagccagttc cggaagaaac tgcaggagtc ggggcagcaa cgctgggatg
     1381 agagctggca gcacactgtg ctccctctgc tcgctcactc acagatgacc cccaggcccc
     1441 atccaccctg tggccaccct tcctgccggg gcttttgagt gccccctagt ggtcataagc
     1501 ctgaggacag cagtgggcga cagctaggat ctggctactg atctggcagc tctcttctgt
     1561 tctgagcact tctgttactt ccagtgtccc tgccaacttc tcagtccctg ggtttttgtt
     1621 tctggacttg tcacatccct tgcgttctgg ttctgctgtg agctctggga tagcctgtgt
     1681 tcactgggtt tggctgagca aggctgaact gtctgacagg acagtcatac ttaataaatg
     1741 tatatattta tttgtacaaa aaaaaaaaaa aa
//
