LOCUS       NM_177859               2603 bp    mRNA    linear   ROD 05-AUG-2023
DEFINITION  Mus musculus AKNA domain containing 1 (Aknad1), mRNA.
ACCESSION   NM_177859 XM_001052094 XM_001052095
VERSION     NM_177859.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2603)
  AUTHORS   Piao Y, Ko NT, Lim MK and Ko MS.
  TITLE     Construction of long-transcript enriched cDNA libraries from
            submicrogram amounts of total RNAs by a universal PCR amplification
            method
  JOURNAL   Genome Res 11 (9), 1553-1558 (2001)
   PUBMED   11544199
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK164420.1, AK135678.1 and AL671917.8.
            
            On or before Jul 9, 2009 this sequence version replaced
            XM_001052094.2, XM_001052095.2, NM_177859.2.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK164420.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164137 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-748               AK164420.1         2-749
            749-919             AK164420.1         751-921
            920-1264            AK164420.1         923-1267
            1265-2481           AK135678.1         225-1441
            2482-2590           AK164420.1         2485-2593
            2591-2603           AL671917.8         124021-124033
FEATURES             Location/Qualifiers
     source          1..2603
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="3"
                     /map="3 47.64 cM"
     gene            1..2603
                     /gene="Aknad1"
                     /gene_synonym="4921525H12Rik"
                     /note="AKNA domain containing 1"
                     /db_xref="GeneID:329738"
                     /db_xref="MGI:MGI:3584453"
     exon            1..195
                     /gene="Aknad1"
                     /gene_synonym="4921525H12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            196..1295
                     /gene="Aknad1"
                     /gene_synonym="4921525H12Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             318..2345
                     /gene="Aknad1"
                     /gene_synonym="4921525H12Rik"
                     /codon_start=1
                     /product="protein AKNAD1"
                     /protein_id="NP_808527.2"
                     /db_xref="CCDS:CCDS51049.1"
                     /db_xref="GeneID:329738"
                     /db_xref="MGI:MGI:3584453"
                     /translation="MDETDFSEDMTYKQQEDLPYDGDFSQMKMCTSYNFTITNDTSPV
                     SAEVVLAGEDPQEVASNCEVRQDTALLATWDKMTELVGNRHDKDKQCALASPVPADKE
                     DTSKSHVSDILLHHLSGEQFFRGPGAGYETLPETSNADSLEGSDTLINIISCYAKKYY
                     PKEQIPEFTGQPSPQNGSINSSKPCCSPGTEEENASPLEEAVAAGKSTHQEDPSFLTR
                     TKGPGDKYKSCLRQTPQRQLPDKANSGDWLRYSQAQVHYQFPDFPKVSPKGKLSSKPL
                     TTANEGGHSPRLTNKSTVVQDNLGTTSGSNRVEKQPEQKWKFPEPSQQIQVQPATHTC
                     QEPLTGLEPEKCCLNLTPTPQKDPFSNSYIFQKISHGKQMCQKLKEQTDQLKNKVQEF
                     SKRIKQDSFCHLQDIRLMNKEHAGSLPGPWGSRGSEVTGLPRGGPQEATSKELSELAL
                     KMKQKMEKRGHRRTNCGKFSSSIHEKTLPQDSALGTDPGPDFCPDPGTGLQSNKCEAY
                     GSKTQNSQRVCEEDPPKEFYYRYNTPGQDDLNHGGGYIFVQPHFLYENKISASSWSKA
                     KWIWSWRVNSEPVQDEPDPAAGKYPKTYMISTSDLATPSPHLCCLGIPRIQSLCPSDN
                     MEEMESKILNSPLEHALRTATILKKNTDQMIRSIAEDLAKAQGWRHQLRYY"
     exon            1296..1335
                     /gene="Aknad1"
                     /gene_synonym="4921525H12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1336..1481
                     /gene="Aknad1"
                     /gene_synonym="4921525H12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1482..1544
                     /gene="Aknad1"
                     /gene_synonym="4921525H12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1545..1672
                     /gene="Aknad1"
                     /gene_synonym="4921525H12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1673..1770
                     /gene="Aknad1"
                     /gene_synonym="4921525H12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1771..1893
                     /gene="Aknad1"
                     /gene_synonym="4921525H12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1894..2001
                     /gene="Aknad1"
                     /gene_synonym="4921525H12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2002..2080
                     /gene="Aknad1"
                     /gene_synonym="4921525H12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2081..2210
                     /gene="Aknad1"
                     /gene_synonym="4921525H12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2211..2603
                     /gene="Aknad1"
                     /gene_synonym="4921525H12Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agtgtgacct cttccttaga gggatgcagg aggagacgca caccacaact ttaaagggtt
       61 atttctgttc tgccattcaa ttgcaaccaa cttcccagtg attgaaagaa ataaaatgat
      121 tttcagttaa cggctggctc atttgcggtg caagactctt tcttcactgt gtgatgtcgg
      181 gaccctaaga tgcagcatag aacacacagt gcagacattt aatgaatgaa atgcaatgaa
      241 aaccagacaa cacattttga gcattaagaa caccaagacc aggcagcaga ggaccacgga
      301 catcagccca caccatcatg gacgaaaccg acttttcaga agatatgact tataaacaac
      361 aggaggacct gccttatgat ggggacttct cccagatgaa gatgtgcact tcttacaact
      421 ttaccataac aaatgacacc tctcctgtct cagcagaagt tgttctggca ggagaagacc
      481 ctcaggaagt ggcttctaac tgtgaggtgc gccaggacac agctctgctg gcaacttggg
      541 ataagatgac tgaacttgtc ggcaataggc atgataaaga taagcaatgc gccctggctt
      601 ctcctgttcc agctgataaa gaagatacct caaagtccca cgtctcagat attttactcc
      661 atcatctctc cggagagcaa ttcttcaggg gtccaggtgc tggctatgaa actctcccag
      721 agacctcgaa tgctgacagt cttgaaggct cagatactct tataaatatc atttcatgtt
      781 atgcaaaaaa gtattacccc aaagaacaaa tcccagaatt cactggccag cccagtcccc
      841 aaaatggttc aataaatagc agcaagccct gttgctcccc tggcacagaa gaagaaaacg
      901 cctctccctt agaagaagca gtggctgctg ggaagagcac ccatcaggaa gatccaagct
      961 ttctaaccag gactaaaggt ccaggtgata aatataaaag ctgcctgagg cagacacccc
     1021 agagacagct gccagacaaa gcaaattcag gcgactggct cagatacagc caggctcaag
     1081 tgcactacca gtttccagat tttcctaagg tttctcccaa agggaaactc tctagcaaac
     1141 cacttaccac agctaacgaa ggcggccatt ctccgaggtt gacgaataaa tcaacagttg
     1201 tgcaagataa tttaggaacc acgtctgggt caaatcgtgt tgaaaaacaa ccggagcaga
     1261 aatggaaatt tcctgaacct tcgcaacaaa tacaggtgca gcctgccaca cacacctgcc
     1321 aagaacctct cacaggactt gaacctgaga aatgttgctt gaatttgaca ccaacacctc
     1381 aaaaagatcc tttctcaaat tcttacatat ttcaaaagat ctcccatgga aaacagatgt
     1441 gccagaaact gaaagaacag actgaccaac tgaagaataa ggtacaagaa ttttccaaaa
     1501 gaataaaaca ggactctttc tgccatttgc aagacataag actgatgaac aaggaacatg
     1561 ctggcagtct tccagggccc tggggctccc gaggaagtga ggtgacaggg ctgccgaggg
     1621 gagggccaca ggaggccacc tccaaggagc tcagtgaact ggccctgaag atgaaacaga
     1681 aaatggagaa aaggggccac agaagaacta actgtgggaa gttttccagt agcatccatg
     1741 aaaaaacact gccccaagac tcggctctcg gtactgatcc aggacccgac ttttgtcctg
     1801 atcctggtac tgggctccag agtaacaaat gtgaagccta cggaagcaag actcagaact
     1861 cccagagagt ctgtgaggaa gacccaccaa aagaatttta ttatagatat aacactccag
     1921 gacaagatga cttaaatcat ggtggaggat atatctttgt ccagcctcac ttcttatatg
     1981 aaaataaaat ctctgcatct tcttggtcaa aagcaaaatg gatctggtcc tggagagtga
     2041 actcagaacc cgttcaagat gagcccgatc ctgcggcagg aaaatatccc aagacttata
     2101 tgatctctac ctcagacctt gcaacaccct caccccacct ctgctgcctg ggaattccta
     2161 gaatccagtc cttatgtccc agtgataaca tggaagaaat ggaatctaag attttaaact
     2221 cgcccttgga gcatgcctta aggacagcaa ccatattgaa aaaaaacacc gaccaaatga
     2281 ttagatccat tgcagaagac ctcgccaagg cacaaggatg gagacaccag ctaagatact
     2341 actaactcag tcccgggcag ccaagggtta aaatgtttgg tcctctccaa aatattttac
     2401 ttatgagata atgtaggaag atagttttct agagaaaaca ctaaaacttt aagaaatgag
     2461 ttatacgaag tgcttaaatg gagaaaaaaa agcaaaacaa gccctctggc atttatatct
     2521 ttatgtgaaa ataaatctat gttcttccta attcataata aaataaaaac aataaaacaa
     2581 atactttatt attttttcta ttt
//
