LOCUS       NM_146155               6602 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus AT hook, DNA binding motif, containing 1 (Ahdc1),
            transcript variant 1, mRNA.
ACCESSION   NM_146155
VERSION     NM_146155.3
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 6602)
  AUTHORS   Li,L., Shao,S., Wang,Y., Du,Z., Yu,H., Li,F. and Qin,Y.
  TITLE     Ahdc1 is a potent regulator of obesity and energy metabolism
  JOURNAL   Am J Physiol Endocrinol Metab 325 (5), E638-E648 (2023)
   PUBMED   37819197
  REMARK    GeneRIF: Ahdc1 is a potent regulator of obesity and energy
            metabolism.
REFERENCE   2  (bases 1 to 6602)
  AUTHORS   Collier,A., Liu,A., Torkelson,J., Pattison,J., Gaddam,S., Zhen,H.,
            Patel,T., McCarthy,K., Ghanim,H. and Oro,A.E.
  TITLE     Gibbin mesodermal regulation patterns epithelial development
  JOURNAL   Nature 606 (7912), 188-196 (2022)
   PUBMED   35585237
REFERENCE   3  (bases 1 to 6602)
  AUTHORS   Quintero-Rivera,F., Xi,Q.J., Keppler-Noreuil,K.M., Lee,J.H.,
            Higgins,A.W., Anchan,R.M., Roberts,A.E., Seong,I.S., Fan,X.,
            Lage,K., Lu,L.Y., Tao,J., Hu,X., Berezney,R., Gelb,B.D., Kamp,A.,
            Moskowitz,I.P., Lacro,R.V., Lu,W., Morton,C.C., Gusella,J.F. and
            Maas,R.L.
  TITLE     MATR3 disruption in human and mouse associated with bicuspid aortic
            valve, aortic coarctation and patent ductus arteriosus
  JOURNAL   Hum Mol Genet 24 (8), 2375-2389 (2015)
   PUBMED   25574029
REFERENCE   4  (bases 1 to 6602)
  AUTHORS   Schebelle,L., Wolf,C., Stribl,C., Javaheri,T., Schnutgen,F.,
            Ettinger,A., Ivics,Z., Hansen,J., Ruiz,P., von Melchner,H.,
            Wurst,W. and Floss,T.
  TITLE     Efficient conditional and promoter-specific in vivo expression of
            cDNAs of choice by taking advantage of recombinase-mediated
            cassette exchange using FlEx gene traps
  JOURNAL   Nucleic Acids Res 38 (9), e106 (2010)
   PUBMED   20139417
REFERENCE   5  (bases 1 to 6602)
  AUTHORS   Taniwaki,T., Haruna,K., Nakamura,H., Sekimoto,T., Oike,Y.,
            Imaizumi,T., Saito,F., Muta,M., Soejima,Y., Utoh,A., Nakagata,N.,
            Araki,M., Yamamura,K. and Araki,K.
  TITLE     Characterization of an exchangeable gene trap using pU-17 carrying
            a stop codon-beta geo cassette
  JOURNAL   Dev Growth Differ 47 (3), 163-172 (2005)
   PUBMED   15840001
REFERENCE   6  (bases 1 to 6602)
  AUTHORS   Osipovich,A.B., Singh,A. and Ruley,H.E.
  TITLE     Post-entrapment genome engineering: first exon size does not affect
            the expression of fusion transcripts generated by gene entrapment
  JOURNAL   Genome Res 15 (3), 428-435 (2005)
   PUBMED   15741512
REFERENCE   7  (bases 1 to 6602)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
REFERENCE   8  (bases 1 to 6602)
  AUTHORS   Araki,K., Imaizumi,T., Sekimoto,T., Yoshinobu,K., Yoshimuta,J.,
            Akizuki,M., Miura,K., Araki,M. and Yamamura,K.
  TITLE     Exchangeable gene trap using the Cre/mutated lox system
  JOURNAL   Cell Mol Biol (Noisy-le-grand) 45 (5), 737-750 (1999)
   PUBMED   10512203
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK149347.1, BC060231.1 and AL627184.18.
            
            On Jan 26, 2007 this sequence version replaced NM_146155.2.
            
            ##Evidence-Data-START##
            CDS exon combination :: BC060231.1, AK134372.1 [ECO:0000331]
            RNAseq introns       :: single sample supports all introns
                                    SAMN00849374, SAMN00849379 [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-32                AK149347.1         248-279
            33-6137             BC060231.1         1-6105
            6138-6602           AL627184.18        116754-117218
FEATURES             Location/Qualifiers
     source          1..6602
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 66.18 cM"
     gene            1..6602
                     /gene="Ahdc1"
                     /gene_synonym="D030015G18Rik"
                     /note="AT hook, DNA binding motif, containing 1"
                     /db_xref="GeneID:230793"
                     /db_xref="MGI:MGI:2444218"
     exon            1..18
                     /gene="Ahdc1"
                     /gene_synonym="D030015G18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            19..116
                     /gene="Ahdc1"
                     /gene_synonym="D030015G18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            117..307
                     /gene="Ahdc1"
                     /gene_synonym="D030015G18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            308..538
                     /gene="Ahdc1"
                     /gene_synonym="D030015G18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            539..576
                     /gene="Ahdc1"
                     /gene_synonym="D030015G18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            577..5478
                     /gene="Ahdc1"
                     /gene_synonym="D030015G18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            5479..6602
                     /gene="Ahdc1"
                     /gene_synonym="D030015G18Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      5884..5889
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Ahdc1"
                     /gene_synonym="D030015G18Rik"
                     /note="hexamer: TATAAA"
     polyA_site      5917
                     /gene="Ahdc1"
                     /gene_synonym="D030015G18Rik"
                     /note="major polyA site"
     polyA_site      6092
                     /gene="Ahdc1"
                     /gene_synonym="D030015G18Rik"
     polyA_site      6098
                     /gene="Ahdc1"
                     /gene_synonym="D030015G18Rik"
                     /note="major polyA site"
ORIGIN      
        1 ggatggtgag cagcgaagca gccgggcgcc cgtgtcgctg ccgccggcgg aagatagacg
       61 ccccccgaaa cccctcgcct ggctcggacc cacggagccg gcagcccagc actccgatgg
      121 ggaggttgcc tgactgtcta cccatcggcc tggaccccag agccaagcca gctgagtgag
      181 tgccgagggt cccaggtgac cgggggagtg gcactgctca ggcctctgca aagactaccc
      241 tggagaagct gatgctggtg gagacagccc tttcttgctg agtccagcct ctgcagagcc
      301 tgcgcagccc ctacctcaca ggattggtat gaagaatcaa atgaagcaat gcctggacag
      361 cttccagccc agtgcctggc gtgcagtagg tgctcactaa acctgagcta cggtggtcct
      421 ttccaggcgc tgtccacacc ccaaggcctg ggctcaggcc gaagttgctc cacaacaccc
      481 ccagctgaca gccatcgact ggcagagtcc ccaagcacgg gggccctctg tttaccagag
      541 ataaccagtg tgacggccca ggcggcagag ccgagggttc tggtcccggc ttctcgcacc
      601 ctcatgtcag ccctggcccc gcccggcggc ccgaggagga caaggtcagg atgcgtgtga
      661 agccccaggg cctggtggtg acttccagtg ccgtgtgcag ctctcctgac tacctccgag
      721 agcccaagta ctaccccggc ggccccccaa ccccccggcc cttgcttccc acccggcccc
      781 ctgccagccc acctgacaag gccttttcca cccatacctt ctctgagaac ccacgcccac
      841 cccctcggcg ggaccccagc tcccgccgtc caccagtcct tgccaaggga gacgacctgc
      901 tacctcctcg ggcagcccgg cctgtctccc aggcccattg tccctcaccg gctccagaca
      961 acagctccct ccgccactgg gacaacgggc gtgtgaacct gcgtccagta gtgcagctga
     1021 ttgacatcat gaaggacttg acaaggctgt cgcaggacct gcagcacagc ggtgtgcatc
     1081 tggactgtgg agggcttcgg ctgagccgcc cacccgctcc gccacccggc gacttgcagt
     1141 acagcttctt ctcttcgccc agcctggcca acagcatccg cagccccgag gagcgtgcta
     1201 accctcacac caagtcagag cggcccagcc accctctcta tgaacctgag cccgagccca
     1261 gggatagtcc ccagcctggc caaggccatg gtcctggagc cgcggccaca gccactggtc
     1321 tgccccccga gcccgagcca gatgggcctg attactctga gctggcagat gccgacatcc
     1381 tcagtgaact ggcctccctc acttgccctg aggcccagct cctggaggct caagcccttg
     1441 agccgccttc accacagcct gagccgcagc ttctggaccc ccagccccgc ttcctagatc
     1501 cacaggcact agagcctcta ggagaaggtt tggagctacc acccctgcag ccccttgctg
     1561 atcccctggg gctgccgagc ctgaccctgc aggccctaga taccctacct gattccttgg
     1621 aatcccagct ccttgaccct caggccctgg accccctgcc caagttgctg gatgtccccg
     1681 gtcgacgtct agagccccag caatccttgg gccactgcca actggctgag cccttacgcc
     1741 tggacttgtg ctcacctcat ggtccccctg ggcctgaggg ccaccccaag tacgccttga
     1801 ggcgcactga taggccaaag atcctgtgtc gcaggcggaa agccggaagg ggccggaagg
     1861 cggactcagg acctgagggt cgcctgcttc ctcttcccat gcctacaggg ctggcagctg
     1921 ccctggccga gcccccaccg ctgccaccgc caccacctcc tactctgtca ggcccaggcc
     1981 cagttcccga gctggagcca gagtcttctc aaaccccgat ggtccccacc cgcaaaggca
     2041 agtgcagggg tgtgcggcgc atggtggtga agatggccaa gatccccgtg tcactggggc
     2101 ggaggaacaa gaccacgtac aaagtttcat ccttgagcag cagtctgagt gtggagggca
     2161 aggagctggg cttgagggtg tcgtcagagc ccaccccact gctgaagatg aagaacaacg
     2221 ggcggaatgt ggtggtcgtc ttcccgccag gtgagatgcc catcattctc aagcgcaagc
     2281 gtggccgccc tcccaagaac ctgctgctgg gtcccgggaa gcccaaagag ccgacagtgg
     2341 tagctgctga ggctgctact gtgacagcgg ccaccatggc catgcctgag gtgaagaaac
     2401 gccggcgacg gaaacagaag ctggcgtctc cgcagccatc gtatgcagca gacgccaatg
     2461 acagtaaggc tgaatattct gatgtcctcg ccaagctggc ctttttgaac cgccagagtc
     2521 agtgtgctgg gaggtgctcg ccaccccgct gctggacacc cagtgagcct gagtccgtgc
     2581 accaggcccc ggacactcag agcatctctc agttcctgca tcgtgtgcag ggcttccgga
     2641 ggcgtggagg caaaacagga ggctttggag gtaggggtgg aggccacgca gccaaggcag
     2701 cccgctgttc ctttagtgac ttttttgagg gcattggcaa gaaaaagaag gtggtagcag
     2761 tggcagctcc tgggcttgtg ggtcctggtc tcaccgagtt ggggcatcca cgcaaaaggg
     2821 gccgagggga ggtagatgct gtaactggga aacccaagcg caagaggcgg tcccgaaaga
     2881 atgggactct gttcccagag caggtgccca gtggcccagg ctttggggag gcaggtgctg
     2941 agtgggtcgg agacaagggt ggtggctggg cccctcacca tgggcaccca ggagggcaag
     3001 ctggcagaaa ctgtggtttc caggggaccg aggccagggc ttttgcctcc actgggctgg
     3061 agagtggggc ttcaggccgt ggcagctact atgctggtgc gccctcaggc cagacggagc
     3121 tcagccagga gcgccagaac ctcttcactg gctattttcg gtccctgctt gattcagatg
     3181 actcctctga cctcttggac tttgccctgt cggcctctcg cccagagtcc cggaaggcat
     3241 caggaaccta tgcagggcct ccctccagtg cactgcctgc tcagcggggc cttgccactt
     3301 tcccaagccg gggagccaag gctagcccgg tggcagtggg cagcagtgga gctggggcag
     3361 acccctcctt tcagcctgtc ctgccttccc gtcagacctt tccaccaggg cgggcaacaa
     3421 gctatgggat aaccccagcc acttcagact gccgggcagc tgagaccttc ccaaagctgg
     3481 ctcccccacc ttcagccgtg gcccgctcac ctacaaccca tccgcccgcc aacacctacc
     3541 cacctcagta tggtggctat ggggccgggc aaagcgtgtt tgcctcggca aagccctttt
     3601 caggccagga ctgtgcaaac agcaaggact gcagcttcgc ctatggcagc ggcaatagcc
     3661 tccctgcctc acccagcagt gcccacagtg ctggctacgc cccgccacct actgggggtc
     3721 cctgcctacc gcccagcaag gcttccttct tcaacagctc tgaggggggc cccttctctg
     3781 ggtcagctcc cacacccttg cgctgtgaca gtcgagccag taccgtctca cccggtggct
     3841 acatggtgcc caagggcacc acggcttctg cggcctctgt ggcctcctcc tcttcctctt
     3901 cctttcagcc ctcacctgag aactgtcggc agtttgtggg ggcttctcag tggcctttcc
     3961 ggcaggggta tggaggcctg gactgggcct cagaggcctt tagtcagctc tacaatccca
     4021 attttgactg ccatggcagc gaacccaatg tgatcttgga catctcgaac tacacgccgc
     4081 agaaggtaaa gcagcagaca gccgtgtccg agaccttctc cgagtcatcc tctgacagca
     4141 cccagttcag tcagccagtc ggtggtggtg gcttcaggcg tgccaacagc gaggcctcaa
     4201 gcagtgaggg ccagtctagc ctgtcgagcc tggagaagct catgatggac tggaacgaag
     4261 cttcgtctgc tcccggctac aactggaacc agagtgtcct ctttcagagt agctcaaagc
     4321 ccggccgtgg acgacggaag aaggtggacc tgtttgaggc ctcccatctg ggcttttcaa
     4381 catccacctc ggccactgcc tctggctacc cgtccaaacg gagcaccggg ccccggcagc
     4441 ctcggggtgg ccggggtagt ggggcctgct cggccaagaa ggagagaggt ggtacagcgg
     4501 ccaaagccaa gttcatcccc aagccacaac cggtgaaccc cctgttccag gacagcccag
     4561 accttggcct ggactactac agtggagaca gcagcatgtc accactgccc tcccagtcga
     4621 gagcctttgg tgtgggagaa cgcgatccct gtgacttcat gggaccctac tccatgaatc
     4681 catccacacc ttctgatggc acttttggcc aaggcttcca ctgtgactct cccagcctgg
     4741 gtgctgcgga gcttgatggc aagcatttcc caccactggc ccacccgccc acagtgttcg
     4801 atgctggcct gcagaaggcc tactcaccca cctgttcacc aacgctaggc ttcaaggaag
     4861 agttgcggcc accaccttcc aagctgactg cctgtgagcc cctcaagcat ggtcttcagg
     4921 gggctagcct gagccatgct gcccaagccc acctgagctg ccgggaccta ccgctgggcc
     4981 agcctcacta tgattcccct agttgcaagg gtacagccta ctggtaccca ccaggttcag
     5041 ctgcccgtag cccaccctat gaaggcaagg tgggctcggg gctgctggct gacttcctgg
     5101 gcaggacgga agctgtctgc ctcagtgccc ctcacctggc tagcccacca gccacgccca
     5161 aggccgacaa ggagccactg gagatggccc ggcccccggg tccaccccgt ggccctgctg
     5221 cagccactgc tggctatggc tgcccactcc ttagtgactt aactctgtcc cctgtgccga
     5281 gggactcgct gctgcccctg caggacactg cctacaggta tccaggcttt atgccgcagg
     5341 cacatcctgg cctgggtggg ggccctaaga gtggcttcct ggggcccatg gcagaacctc
     5401 accctgagga cacatttacc gtcacctccc tgtagtacca actgaagtgc cgactggacc
     5461 acgaggtttt gttcctggct ttcagaagag caatgccaag acccctccca gcgtccacat
     5521 cgtcctctgg caggagcacc tgcccctctg cctcccacct gccccttgca ccccctgcgg
     5581 ccccataccc caccctacaa cccctccctg cccatctcct ccacgcagaa gccgaaggtg
     5641 agccctttct gcacaaaacc agcaattgta aatacttttt aaaatgtaca aaacttaaaa
     5701 acaaaacaca gttttagaaa aagacaaaaa aaaagagaga gcgagagagc gagcgcgtgt
     5761 gcaagaggtt gtgagcgggg cttcgaggtg tccagagccc ctgcaagtgt gcactgagaa
     5821 atttatctac aggtcgtttg acaaaaatga acaatatcct atttattgta tatactgttt
     5881 tattataaat tgtggattgt atattgcatt ctgtaaacct gctgtggtcc cgtggtgtgc
     5941 aaattcgcat ggtggggcgg gagggagaac ctcttttggg agcttttttt ttttttcttt
     6001 tttctttttt tctttttcac tcttgggttt tctcttctgt tgttgttgtt gttttttgtt
     6061 ggcaggacac acccaaagat ccaagtttgt attaaaaaga aatgaaaaaa agcaaaaaaa
     6121 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaccttgt gtcttgtaaa actggggaca
     6181 acagccactg gtccttctga gaggagttga gacctcagga tgttcctggg ttccctgcct
     6241 ctgagtcctg ccacctgcct gtgtttgagt gtcatctccc tccctgcagc ctctgctccc
     6301 ctgcctctaa gcactcccat cccactgctt agagctttaa agatttgttt attttattta
     6361 tgtgtaccaa tgttttgcct gaatctatgt ttgtgcacgg catgtgagct tggtgacctt
     6421 gaaggtcaga aaagggcatg ggatccccag ttacagatag ttacacactg tcatttagat
     6481 gcagggactc aaatccatgt cctctgcaag agcagtaagt gttctcacca acagagccat
     6541 tgcttgacac gtccccattt ctgtcctaca tcctgtggcc ccccagagcc actttccgtc
     6601 cc
//
