LOCUS       NM_026945               1341 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus alcohol dehydrogenase 6A (class V) (Adh6a), mRNA.
ACCESSION   NM_026945 XM_131202 XM_896284 XM_915531 XM_975723 XM_975763
VERSION     NM_026945.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1341)
  AUTHORS   Szalai G, Veres M, Duester G, Lawther R, Lockhart M and Felder MR.
  TITLE     Tissue expression pattern of class II and class V genes found in
            the Adh complex on mouse chromosome 3
  JOURNAL   Biochem Genet 46 (11-12), 685-695 (2008)
   PUBMED   18802746
  REMARK    GeneRIF: Adh6a gene expression patterns.
REFERENCE   2  (bases 1 to 1341)
  AUTHORS   Gonzalez-Duarte R and Albalat R.
  TITLE     Merging protein, gene and genomic data: the evolution of the
            MDR-ADH family
  JOURNAL   Heredity (Edinb) 95 (3), 184-197 (2005)
   PUBMED   16121213
  REMARK    Review article
REFERENCE   3  (bases 1 to 1341)
  AUTHORS   Szalai G, Duester G, Friedman R, Jia H, Lin S, Roe BA and Felder
            MR.
  TITLE     Organization of six functional mouse alcohol dehydrogenase genes on
            two overlapping bacterial artificial chromosomes
  JOURNAL   Eur J Biochem 269 (1), 224-232 (2002)
   PUBMED   11784316
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BB870350.1, AK007397.1 and AK028114.1.
            
            On or before Jan 31, 2007 this sequence version replaced
            XM_131202.7, XM_896284.2, XM_915531.2, XM_975763.1, XM_975723.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK007397.1, BC130016.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849377, SAMN00849378
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-4                 BB870350.1         2-5
            5-79                AK007397.1         1-75
            80-449              AK028114.1         81-450
            450-606             AK007397.1         446-602
            607-1055            AK028114.1         609-1057
            1056-1341           AK007397.1         1052-1337
FEATURES             Location/Qualifiers
     source          1..1341
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="3"
                     /map="3 64.19 cM"
     gene            1..1341
                     /gene="Adh6a"
                     /gene_synonym="1810009C16Rik; Adh5a"
                     /note="alcohol dehydrogenase 6A (class V)"
                     /db_xref="GeneID:69117"
                     /db_xref="MGI:MGI:1916367"
     exon            1..77
                     /gene="Adh6a"
                     /gene_synonym="1810009C16Rik; Adh5a"
                     /inference="alignment:Splign:2.1.0"
     CDS             60..1187
                     /gene="Adh6a"
                     /gene_synonym="1810009C16Rik; Adh5a"
                     /codon_start=1
                     /product="alcohol dehydrogenase 6A (class V)"
                     /protein_id="NP_081221.1"
                     /db_xref="CCDS:CCDS38652.1"
                     /db_xref="GeneID:69117"
                     /db_xref="MGI:MGI:1916367"
                     /translation="MNTLGKTITCRAAIAWAKNSPLSIEEVQVEPPKSGEVRIKMISS
                     GICGSDDHVLKGELVVNFPLIPGHEGAGIVESVGDGVCSMKPGDKVLILIIPQCRECD
                     ACLHPKGNFCYKQDVLPCSGVMLDGTSRFSCRGQKIYHSFRTSSFTEYTVVPEIAAVK
                     IDDAAPMDKVCLISCGFPTGYGAAVNSAKVTPGSTCVVFGLGGVGSAIVMGCKASGAS
                     RIIGVDINEEKFPRARALGVTDCLNPNKLEKPVQEVVMEMTGVGVDFAFEAIGLVDTM
                     VAAWNSCNNSYGVCLIAGLAPSDAQLSLEAPKILSGKTLKGVCLGDYKTRDCIPQIVT
                     DYLQNKINIDPLVTYQLPFNQLHEALELFHSGKAIRCVLLF"
     exon            78..179
                     /gene="Adh6a"
                     /gene_synonym="1810009C16Rik; Adh5a"
                     /inference="alignment:Splign:2.1.0"
     exon            180..318
                     /gene="Adh6a"
                     /gene_synonym="1810009C16Rik; Adh5a"
                     /inference="alignment:Splign:2.1.0"
     exon            319..406
                     /gene="Adh6a"
                     /gene_synonym="1810009C16Rik; Adh5a"
                     /inference="alignment:Splign:2.1.0"
     exon            407..626
                     /gene="Adh6a"
                     /gene_synonym="1810009C16Rik; Adh5a"
                     /inference="alignment:Splign:2.1.0"
     exon            627..887
                     /gene="Adh6a"
                     /gene_synonym="1810009C16Rik; Adh5a"
                     /inference="alignment:Splign:2.1.0"
     exon            888..1023
                     /gene="Adh6a"
                     /gene_synonym="1810009C16Rik; Adh5a"
                     /inference="alignment:Splign:2.1.0"
     exon            1024..1162
                     /gene="Adh6a"
                     /gene_synonym="1810009C16Rik; Adh5a"
                     /inference="alignment:Splign:2.1.0"
     exon            1163..1341
                     /gene="Adh6a"
                     /gene_synonym="1810009C16Rik; Adh5a"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1327..1332
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Adh6a"
                     /gene_synonym="1810009C16Rik; Adh5a"
                     /note="putative"
     polyA_site      1341
                     /gene="Adh6a"
                     /gene_synonym="1810009C16Rik; Adh5a"
                     /note="putative"
ORIGIN      
        1 agagtcaaag cttattcaga gaaaccacaa aggacacaca cgaaaccagg aaagtcacca
       61 tgaataccct gggaaagaca atcacatgtc gggcagccat tgcctgggca aaaaattctc
      121 ctctttcaat tgaagaagtg caagttgagc caccgaagtc tggagaagtt cgtattaaga
      181 tgatctcgtc agggatctgt ggttctgatg atcacgtgct gaaaggagaa ctcgtggtga
      241 actttccttt aattccgggt catgaaggag cgggaattgt ggagagtgtt ggtgatggag
      301 tttgctccat gaaaccagga gataaagtcc tcatcctcat tattccacag tgtagagaat
      361 gtgacgcctg cttgcacccc aaaggaaatt tctgctacaa gcaagatgtt ctgccttgtt
      421 ctggggtgat gctcgacggg acctcccggt tttcctgccg aggacagaag atttatcact
      481 cgttccgaac aagctcattc acagagtaca ctgtggtgcc cgagatcgcc gcggtaaaaa
      541 ttgatgacgc agctcctatg gataaagttt gtctcataag ctgtggcttc cctactggct
      601 acggggctgc tgttaactct gccaaggtca cccctggctc tacctgtgtg gtttttggac
      661 tcggaggggt cggctcagct attgtcatgg gctgcaaagc ctctggtgca tctagaatca
      721 tcggggttga catcaatgag gagaagtttc ctcgggcaag agccttgggg gtcaccgact
      781 gtctcaaccc taacaagctg gagaagcctg tgcaggaggt tgtgatggaa atgacgggtg
      841 tcggtgttga ctttgccttt gaggccattg gactggttga taccatggtt gctgcttgga
      901 actcctgcaa caacagctat ggcgtctgtc tgatcgctgg gctcgctcca tcagatgcac
      961 agttatccct tgaagcaccc aagattttgt ctgggaaaac cctgaagggc gtgtgtctgg
     1021 gagattataa aaccagagac tgcatacccc aaatagtgac tgattatctc caaaataaga
     1081 ttaatataga tcctttagtg acttatcagc tgccttttaa ccagctccat gaagccttgg
     1141 agctgtttca ttcaggaaaa gccatccgtt gtgttctgct cttctgagat ctcagtgata
     1201 aagaagagct cgggagcaac cagaagggct ttccttcctt cctgtttcac ctccctgagc
     1261 agcgggaaga gacagaaaca gagtgcagct gttctcctga aacgaggact tctagaccat
     1321 actgataata aaataagttg g
//
